RNA–Protein interactions for RNA: ENST00000266984.9

CCDC65-201, Transcript of coiled-coil domain containing 65, humanhuman

TSL 5 BASIC

Gene CCDC65, Length 2,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-201ENST00000266984 SGIP1Q9BQI5 828 aa12.23□□□□□ -0.45
CCDC65-201ENST00000266984 LAS1LQ9Y4W2 734 aaKnown RBP12.23□□□□□ -0.45
CCDC65-201ENST00000266984 CICQ96RK0 1608 aaPredicted RBP12.23□□□□□ -0.45
CCDC65-201ENST00000266984 CANXP27824 592 aaKnown RBP12.23□□□□□ -0.45
CCDC65-201ENST00000266984 POLD1P28340 1107 aa12.23□□□□□ -0.45
CCDC65-201ENST00000266984 RFC4P35249 363 aa12.23□□□□□ -0.45
CCDC65-201ENST00000266984 TSPYL4Q9UJ04 414 aa12.23□□□□□ -0.45
CCDC65-201ENST00000266984 USP16Q9Y5T5 823 aa12.23□□□□□ -0.45
CCDC65-201ENST00000266984 SNRPA1P09661 255 aaKnown RBP12.22□□□□□ -0.45
CCDC65-201ENST00000266984 ZBTB1Q9Y2K1 713 aa12.22□□□□□ -0.45
CCDC65-201ENST00000266984 A1BGP04217 495 aa12.22□□□□□ -0.45
CCDC65-201ENST00000266984 ADRA2BP18089 450 aa12.22□□□□□ -0.45
CCDC65-201ENST00000266984 ARXQ96QS3 562 aa12.22□□□□□ -0.45
CCDC65-201ENST00000266984 EIF4A1P60842 406 aaKnown RBP12.21□□□□□ -0.45
CCDC65-201ENST00000266984 KDM3BQ7LBC6 1761 aa12.2□□□□□ -0.46
CCDC65-201ENST00000266984 SOS1Q07889 1333 aaPredicted RBP12.2□□□□□ -0.46
CCDC65-201ENST00000266984 SRP68Q9UHB9 627 aaKnown RBP12.2□□□□□ -0.46
CCDC65-201ENST00000266984 DIEXFQ68CQ4 756 aaKnown RBP12.2□□□□□ -0.46
CCDC65-201ENST00000266984 PIP4K2AP48426 406 aaPredicted RBP12.19□□□□□ -0.46
CCDC65-201ENST00000266984 KLHL34Q8N239 644 aa12.19□□□□□ -0.46
CCDC65-201ENST00000266984 BABAM1Q9NWV8 329 aa12.19□□□□□ -0.46
CCDC65-201ENST00000266984 ZNF330Q9Y3S2 320 aaPredicted RBP12.19□□□□□ -0.46
CCDC65-201ENST00000266984 COL24A1Q17RW2 1714 aa12.19□□□□□ -0.46
CCDC65-201ENST00000266984 CHL1O00533 1208 aa12.18□□□□□ -0.46
CCDC65-201ENST00000266984 GIGYF1O75420 1035 aaPredicted RBP12.18□□□□□ -0.46
CCDC65-201ENST00000266984 GYS1P13807 737 aa12.18□□□□□ -0.46
CCDC65-201ENST00000266984 SALL2Q9Y467 1007 aaPredicted RBP12.18□□□□□ -0.46
CCDC65-201ENST00000266984 ZPR1O75312 459 aa12.18□□□□□ -0.46
CCDC65-201ENST00000266984 EIF5P55010 431 aaKnown RBP12.18□□□□□ -0.46
CCDC65-201ENST00000266984 USPL1Q5W0Q7 1092 aa12.18□□□□□ -0.46
CCDC65-201ENST00000266984 FHDC1Q9C0D6 1143 aaPredicted RBP12.18□□□□□ -0.46
CCDC65-201ENST00000266984 COL15A1P39059 1388 aa12.18□□□□□ -0.46
CCDC65-201ENST00000266984 USP42Q9H9J4 1324 aaKnown RBP12.17□□□□□ -0.46
CCDC65-201ENST00000266984 NPM2Q86SE8 214 aaKnown RBP12.17□□□□□ -0.46
CCDC65-201ENST00000266984 NLGN1Q8N2Q7 840 aa12.17□□□□□ -0.46
CCDC65-201ENST00000266984 C4AP0C0L4 1744 aa12.17□□□□□ -0.46
CCDC65-201ENST00000266984 IL6STP40189 918 aaPredicted RBP12.17□□□□□ -0.46
CCDC65-201ENST00000266984 CFAP44Q96MT7 982 aa12.17□□□□□ -0.46
CCDC65-201ENST00000266984 NARFQ9UHQ1 456 aa12.17□□□□□ -0.46
CCDC65-201ENST00000266984 A0A087WZG4 1122 aa12.16□□□□□ -0.46
CCDC65-201ENST00000266984 MMP10P09238 476 aa12.16□□□□□ -0.46
CCDC65-201ENST00000266984 CALD1Q05682 793 aaKnown RBP12.16□□□□□ -0.46
CCDC65-201ENST00000266984 FKBP8Q14318 412 aa12.16□□□□□ -0.46
CCDC65-201ENST00000266984 SYT17Q9BSW7 474 aa12.16□□□□□ -0.46
CCDC65-201ENST00000266984 TBC1D2BQ9UPU7 963 aa12.16□□□□□ -0.46
CCDC65-201ENST00000266984 CCER2I3L3R5 266 aa12.15□□□□□ -0.46
CCDC65-201ENST00000266984 EIF2S2P20042 333 aaKnown RBP12.15□□□□□ -0.46
CCDC65-201ENST00000266984 NBPF26B4DH59 902 aa12.15□□□□□ -0.46
CCDC65-201ENST00000266984 KRT24Q2M2I5 525 aa12.15□□□□□ -0.46
CCDC65-201ENST00000266984 NBPF10Q6P3W6 841 aaKnown RBP12.15□□□□□ -0.46
CCDC65-201ENST00000266984 WWC1Q8IX03 1113 aa12.15□□□□□ -0.46
CCDC65-201ENST00000266984 NGEFQ8N5V2 710 aa12.15□□□□□ -0.46
CCDC65-201ENST00000266984 NBPF15Q8N660 670 aa12.15□□□□□ -0.46
CCDC65-201ENST00000266984 MBIPQ9NS73 344 aa12.15□□□□□ -0.46
CCDC65-201ENST00000266984 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
CCDC65-201ENST00000266984 GNAI1P63096 354 aa12.14□□□□□ -0.47
CCDC65-201ENST00000266984 CCDC27Q2M243 656 aa12.14□□□□□ -0.47
CCDC65-201ENST00000266984 MIER1Q8N108 512 aa12.14□□□□□ -0.47
CCDC65-201ENST00000266984 NECTIN2Q92692 538 aa12.14□□□□□ -0.47
CCDC65-201ENST00000266984 IFT57Q9NWB7 429 aa12.14□□□□□ -0.47
CCDC65-201ENST00000266984 DZIP3Q86Y13 1208 aaKnown RBP12.14□□□□□ -0.47
CCDC65-201ENST00000266984 BCL2L12Q9HB09 334 aa12.14□□□□□ -0.47
CCDC65-201ENST00000266984 PARP3Q9Y6F1 533 aa12.14□□□□□ -0.47
CCDC65-201ENST00000266984 SRCAPQ6ZRS2 3230 aa12.13□□□□□ -0.47
CCDC65-201ENST00000266984 LAMB4A4D0S4 1761 aa12.13□□□□□ -0.47
CCDC65-201ENST00000266984 MYL6BP14649 208 aa12.13□□□□□ -0.47
CCDC65-201ENST00000266984 TM4SF1P30408 202 aa12.12□□□□□ -0.47
CCDC65-201ENST00000266984 NCBP3Q53F19 620 aaKnown RBP12.12□□□□□ -0.47
CCDC65-201ENST00000266984 BICDL1Q6ZP65 573 aa12.12□□□□□ -0.47
CCDC65-201ENST00000266984 NLGN2Q8NFZ4 835 aa12.12□□□□□ -0.47
CCDC65-201ENST00000266984 ELL2O00472 640 aaPredicted RBP12.11□□□□□ -0.47
CCDC65-201ENST00000266984 CAMTA2O94983 1202 aa12.11□□□□□ -0.47
CCDC65-201ENST00000266984 DDR1Q08345 913 aa12.11□□□□□ -0.47
CCDC65-201ENST00000266984 NFIXQ14938 502 aa12.11□□□□□ -0.47
CCDC65-201ENST00000266984 DUSP27Q5VZP5 1158 aa12.11□□□□□ -0.47
CCDC65-201ENST00000266984 ANXA1P04083 346 aa12.1□□□□□ -0.47
CCDC65-201ENST00000266984 TBC1D9BQ66K14 1250 aa12.1□□□□□ -0.47
CCDC65-201ENST00000266984 TSR2Q969E8 191 aaKnown RBP12.1□□□□□ -0.47
CCDC65-201ENST00000266984 CD2APQ9Y5K6 639 aa12.1□□□□□ -0.47
CCDC65-201ENST00000266984 POLRMTO00411 1230 aaKnown RBP12.1□□□□□ -0.47
CCDC65-201ENST00000266984 WDR63Q8IWG1 891 aa12.1□□□□□ -0.47
CCDC65-201ENST00000266984 DCAF8L1A6NGE4 600 aa12.09□□□□□ -0.47
CCDC65-201ENST00000266984 PDIA6Q15084 440 aa12.09□□□□□ -0.47
CCDC65-201ENST00000266984 HDGFL1Q5TGJ6 251 aa12.09□□□□□ -0.47
CCDC65-201ENST00000266984 C8orf58Q8NAV2 365 aa12.09□□□□□ -0.47
CCDC65-201ENST00000266984 ERBB4Q15303 1308 aa12.09□□□□□ -0.47
CCDC65-201ENST00000266984 SERPINB2P05120 415 aa12.09□□□□□ -0.47
CCDC65-201ENST00000266984 PROSER3Q2NL68 480 aa12.09□□□□□ -0.47
CCDC65-201ENST00000266984 TTLL7Q6ZT98 887 aa12.09□□□□□ -0.47
CCDC65-201ENST00000266984 IL16Q14005 1332 aa12.09□□□□□ -0.47
CCDC65-201ENST00000266984 HOXB7P09629 217 aa12.08□□□□□ -0.48
CCDC65-201ENST00000266984 HLFQ16534 295 aa12.08□□□□□ -0.48
CCDC65-201ENST00000266984 KIF6Q6ZMV9 814 aa12.08□□□□□ -0.48
CCDC65-201ENST00000266984 PELP1Q8IZL8 1130 aaKnown RBP12.08□□□□□ -0.48
CCDC65-201ENST00000266984 AIMP1Q12904 312 aaKnown RBP12.07□□□□□ -0.48
CCDC65-201ENST00000266984 TSPYL6Q8N831 410 aa12.07□□□□□ -0.48
CCDC65-201ENST00000266984 SETDB2Q96T68 719 aa12.07□□□□□ -0.48
CCDC65-201ENST00000266984 DDX21Q9NR30 783 aaKnown RBP eCLIP12.07□□□□□ -0.48
CCDC65-201ENST00000266984 CHPF2Q9P2E5 772 aa12.07□□□□□ -0.48
CCDC65-201ENST00000266984 ZNF652Q9Y2D9 606 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms