RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 HOXB7P09629 217 aa21.36■■□□□ 1.01
SNRPF-201ENST00000266735 SPINK5Q9NQ38 1064 aaPredicted RBP21.36■■□□□ 1.01
SNRPF-201ENST00000266735 CCDC87Q9NVE4 849 aa21.36■■□□□ 1.01
SNRPF-201ENST00000266735 C4BP0C0L5 1744 aa21.36■■□□□ 1.01
SNRPF-201ENST00000266735 TJP1Q07157 1748 aa21.36■■□□□ 1.01
SNRPF-201ENST00000266735 GNPATO15228 680 aa21.36■■□□□ 1.01
SNRPF-201ENST00000266735 R3HDM1Q15032 1099 aaKnown RBP21.36■■□□□ 1.01
SNRPF-201ENST00000266735 INTS5Q6P9B9 1019 aaKnown RBP21.36■■□□□ 1.01
SNRPF-201ENST00000266735 KRT24Q2M2I5 525 aa21.35■■□□□ 1.01
SNRPF-201ENST00000266735 RTCBQ9Y3I0 505 aaKnown RBP21.35■■□□□ 1.01
SNRPF-201ENST00000266735 RPS6KA4O75676 772 aa21.34■■□□□ 1.01
SNRPF-201ENST00000266735 SSFA2P28290 1259 aa21.34■■□□□ 1.01
SNRPF-201ENST00000266735 DUSP27Q5VZP5 1158 aa21.34■■□□□ 1.01
SNRPF-201ENST00000266735 FLAD1Q8NFF5 587 aa21.34■■□□□ 1.01
SNRPF-201ENST00000266735 ZBTB1Q9Y2K1 713 aa21.34■■□□□ 1.01
SNRPF-201ENST00000266735 SOS1Q07889 1333 aaPredicted RBP21.33■■□□□ 1.01
SNRPF-201ENST00000266735 ZBED9Q6R2W3 1325 aa21.33■■□□□ 1.01
SNRPF-201ENST00000266735 SLFN5Q08AF3 891 aa21.33■■□□□ 1
SNRPF-201ENST00000266735 PNPLA7Q6ZV29 1317 aa21.32■■□□□ 1
SNRPF-201ENST00000266735 COL5A3P25940 1745 aaPredicted RBP21.32■■□□□ 1
SNRPF-201ENST00000266735 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.31■■□□□ 1
SNRPF-201ENST00000266735 PSDA5PKW4 1024 aaPredicted RBP21.31■■□□□ 1
SNRPF-201ENST00000266735 A1BGP04217 495 aa21.31■■□□□ 1
SNRPF-201ENST00000266735 C8orf58Q8NAV2 365 aa21.31■■□□□ 1
SNRPF-201ENST00000266735 TAF1LQ8IZX4 1826 aa21.3■■□□□ 1
SNRPF-201ENST00000266735 PHF14O94880 888 aa21.3■■□□□ 1
SNRPF-201ENST00000266735 EIF2S2P20042 333 aaKnown RBP21.3■■□□□ 1
SNRPF-201ENST00000266735 CANXP27824 592 aaKnown RBP21.3■■□□□ 1
SNRPF-201ENST00000266735 IL6STP40189 918 aaPredicted RBP21.3■■□□□ 1
SNRPF-201ENST00000266735 TRAPPC3LQ5T215 181 aa21.3■■□□□ 1
SNRPF-201ENST00000266735 AMIGO3Q86WK7 504 aa21.3■■□□□ 1
SNRPF-201ENST00000266735 CDCA7LQ96GN5 454 aa21.3■■□□□ 1
SNRPF-201ENST00000266735 CHMP4AQ9BY43 222 aa21.3■■□□□ 1
SNRPF-201ENST00000266735 ERBB4Q15303 1308 aa21.3■■□□□ 1
SNRPF-201ENST00000266735 ELL2O00472 640 aaPredicted RBP21.29■■□□□ 1
SNRPF-201ENST00000266735 HDGFL1Q5TGJ6 251 aa21.29■■□□□ 1
SNRPF-201ENST00000266735 EXOSC9Q06265 439 aaKnown RBP21.28■■□□□ 1
SNRPF-201ENST00000266735 TWISTNBQ3B726 338 aaPredicted RBP21.28■■□□□ 1
SNRPF-201ENST00000266735 TRMT2AQ8IZ69 625 aaKnown RBP21.28■■□□□ 1
SNRPF-201ENST00000266735 TSPYL6Q8N831 410 aa21.28■■□□□ 1
SNRPF-201ENST00000266735 EIF5P55010 431 aaKnown RBP21.27■■□□□ 1
SNRPF-201ENST00000266735 NPM2Q86SE8 214 aaKnown RBP21.27■■□□□ 1
SNRPF-201ENST00000266735 COL23A1Q86Y22 540 aaPredicted RBP21.27■■□□□ 1
SNRPF-201ENST00000266735 NBPF26B4DH59 902 aa21.26■□□□□ 0.99
SNRPF-201ENST00000266735 NBPF10Q6P3W6 841 aaKnown RBP21.26■□□□□ 0.99
SNRPF-201ENST00000266735 NBPF15Q8N660 670 aa21.26■□□□□ 0.99
SNRPF-201ENST00000266735 ARHGEF1Q92888 912 aaKnown RBP21.26■□□□□ 0.99
SNRPF-201ENST00000266735 COL15A1P39059 1388 aa21.26■□□□□ 0.99
SNRPF-201ENST00000266735 A0A087WZG4 1122 aa21.25■□□□□ 0.99
SNRPF-201ENST00000266735 RFC4P35249 363 aa21.25■□□□□ 0.99
SNRPF-201ENST00000266735 SMIM5Q71RC9 77 aa21.25■□□□□ 0.99
SNRPF-201ENST00000266735 NECTIN2Q92692 538 aa21.25■□□□□ 0.99
SNRPF-201ENST00000266735 LAMB4A4D0S4 1761 aa21.25■□□□□ 0.99
SNRPF-201ENST00000266735 PIP4K2AP48426 406 aaPredicted RBP21.24■□□□□ 0.99
SNRPF-201ENST00000266735 CCDC30Q5VVM6 783 aa21.24■□□□□ 0.99
SNRPF-201ENST00000266735 SLC16A10Q8TF71 515 aa21.24■□□□□ 0.99
SNRPF-201ENST00000266735 DBF4Q9UBU7 674 aaPredicted RBP21.24■□□□□ 0.99
SNRPF-201ENST00000266735 ZNF330Q9Y3S2 320 aaPredicted RBP21.24■□□□□ 0.99
SNRPF-201ENST00000266735 PDGFDQ9GZP0 370 aaPredicted RBP21.23■□□□□ 0.99
SNRPF-201ENST00000266735 VAMP4O75379 141 aa21.23■□□□□ 0.99
SNRPF-201ENST00000266735 MYL6BP14649 208 aa21.23■□□□□ 0.99
SNRPF-201ENST00000266735 PDIA6Q15084 440 aa21.23■□□□□ 0.99
SNRPF-201ENST00000266735 DDX21Q9NR30 783 aaKnown RBP eCLIP21.23■□□□□ 0.99
SNRPF-201ENST00000266735 CHPF2Q9P2E5 772 aa21.23■□□□□ 0.99
SNRPF-201ENST00000266735 QSER1Q2KHR3 1735 aa21.21■□□□□ 0.99
SNRPF-201ENST00000266735 USP42Q9H9J4 1324 aaKnown RBP21.21■□□□□ 0.99
SNRPF-201ENST00000266735 NARFQ9UHQ1 456 aa21.21■□□□□ 0.99
SNRPF-201ENST00000266735 UBR3Q6ZT12 1888 aa21.21■□□□□ 0.99
SNRPF-201ENST00000266735 ZPR1O75312 459 aa21.2■□□□□ 0.98
SNRPF-201ENST00000266735 PROSER3Q2NL68 480 aa21.2■□□□□ 0.98
SNRPF-201ENST00000266735 LRP10Q7Z4F1 713 aa21.2■□□□□ 0.98
SNRPF-201ENST00000266735 DZIP3Q86Y13 1208 aaKnown RBP21.2■□□□□ 0.98
SNRPF-201ENST00000266735 STK31Q9BXU1 1019 aa21.2■□□□□ 0.98
SNRPF-201ENST00000266735 MTFR1LQ9H019 292 aa21.2■□□□□ 0.98
SNRPF-201ENST00000266735 HYPKQ9NX55 129 aa21.2■□□□□ 0.98
SNRPF-201ENST00000266735 MYH14Q7Z406 1995 aaKnown RBP21.2■□□□□ 0.98
SNRPF-201ENST00000266735 CT47B1P0C2W7 299 aaPredicted RBP21.19■□□□□ 0.98
SNRPF-201ENST00000266735 YTHDC1Q96MU7 727 aaKnown RBP21.19■□□□□ 0.98
SNRPF-201ENST00000266735 ARXQ96QS3 562 aa21.19■□□□□ 0.98
SNRPF-201ENST00000266735 ZBTB7AO95365 584 aa21.18■□□□□ 0.98
SNRPF-201ENST00000266735 ANXA1P04083 346 aa21.18■□□□□ 0.98
SNRPF-201ENST00000266735 ZNF428Q96B54 188 aa21.18■□□□□ 0.98
SNRPF-201ENST00000266735 TBC1D2BQ9UPU7 963 aa21.18■□□□□ 0.98
SNRPF-201ENST00000266735 USPL1Q5W0Q7 1092 aa21.17■□□□□ 0.98
SNRPF-201ENST00000266735 SRP68Q9UHB9 627 aaKnown RBP21.17■□□□□ 0.98
SNRPF-201ENST00000266735 CASZ1Q86V15 1759 aa21.17■□□□□ 0.98
SNRPF-201ENST00000266735 TUBGCP6Q96RT7 1819 aa21.16■□□□□ 0.98
SNRPF-201ENST00000266735 RGL2O15211 777 aa21.16■□□□□ 0.98
SNRPF-201ENST00000266735 GYS1P13807 737 aa21.16■□□□□ 0.98
SNRPF-201ENST00000266735 KIF6Q6ZMV9 814 aa21.16■□□□□ 0.98
SNRPF-201ENST00000266735 NLGN1Q8N2Q7 840 aa21.16■□□□□ 0.98
SNRPF-201ENST00000266735 CAMTA2O94983 1202 aa21.15■□□□□ 0.98
SNRPF-201ENST00000266735 COPS6Q7L5N1 327 aa21.15■□□□□ 0.98
SNRPF-201ENST00000266735 XAGE3Q8WTP9 111 aa21.15■□□□□ 0.98
SNRPF-201ENST00000266735 TTLL7Q6ZT98 887 aa21.14■□□□□ 0.98
SNRPF-201ENST00000266735 SPON1Q9HCB6 807 aa21.14■□□□□ 0.98
SNRPF-201ENST00000266735 ERVV-1B6SEH8 477 aa21.13■□□□□ 0.97
SNRPF-201ENST00000266735 TCERG1O14776 1098 aaKnown RBP21.13■□□□□ 0.97
SNRPF-201ENST00000266735 SLC4A2P04920 1241 aa21.13■□□□□ 0.97
SNRPF-201ENST00000266735 BCL2L12Q9HB09 334 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms