RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 CHPF2Q9P2E5 772 aa13.77□□□□□ -0.21
MSH3-201ENST00000265081 PLCH1Q4KWH8 1693 aa13.77□□□□□ -0.21
MSH3-201ENST00000265081 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
MSH3-201ENST00000265081 WNK3Q9BYP7 1800 aa13.76□□□□□ -0.21
MSH3-201ENST00000265081 BTBD11A6QL63 1104 aa13.76□□□□□ -0.21
MSH3-201ENST00000265081 PDIA6Q15084 440 aa13.76□□□□□ -0.21
MSH3-201ENST00000265081 SLC4A10Q6U841 1118 aa13.76□□□□□ -0.21
MSH3-201ENST00000265081 ALDH1L1O75891 902 aa13.76□□□□□ -0.21
MSH3-201ENST00000265081 MX1P20591 662 aa13.75□□□□□ -0.21
MSH3-201ENST00000265081 LRP10Q7Z4F1 713 aa13.75□□□□□ -0.21
MSH3-201ENST00000265081 DNAAF4Q8WXU2 420 aa13.75□□□□□ -0.21
MSH3-201ENST00000265081 DBF4Q9UBU7 674 aaPredicted RBP13.75□□□□□ -0.21
MSH3-201ENST00000265081 ERC2O15083 957 aa13.75□□□□□ -0.21
MSH3-201ENST00000265081 KCPQ6ZWJ8 1503 aa13.75□□□□□ -0.21
MSH3-201ENST00000265081 PROSER2Q86WR7 435 aaPredicted RBP13.75□□□□□ -0.21
MSH3-201ENST00000265081 PI4K2BQ8TCG2 481 aa13.75□□□□□ -0.21
MSH3-201ENST00000265081 REC8O95072 547 aa13.74□□□□□ -0.21
MSH3-201ENST00000265081 UBTFL1P0CB47 393 aaPredicted RBP13.74□□□□□ -0.21
MSH3-201ENST00000265081 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
MSH3-201ENST00000265081 CASC1Q6TDU7 716 aa13.74□□□□□ -0.21
MSH3-201ENST00000265081 ESYT1Q9BSJ8 1104 aa13.74□□□□□ -0.21
MSH3-201ENST00000265081 EXOC6BQ9Y2D4 811 aa13.74□□□□□ -0.21
MSH3-201ENST00000265081 ANAPC15P60006 121 aa13.73□□□□□ -0.21
MSH3-201ENST00000265081 SPATA31A3Q5VYP0 1347 aa13.73□□□□□ -0.21
MSH3-201ENST00000265081 DDX11L8A8MPP1 907 aa13.73□□□□□ -0.21
MSH3-201ENST00000265081 MPRIPQ6WCQ1 1025 aa13.73□□□□□ -0.21
MSH3-201ENST00000265081 NPHP3Q7Z494 1330 aa13.73□□□□□ -0.21
MSH3-201ENST00000265081 CHMLP26374 656 aa13.72□□□□□ -0.21
MSH3-201ENST00000265081 TNPO1Q92973 898 aaKnown RBP13.72□□□□□ -0.21
MSH3-201ENST00000265081 C1orf141Q5JVX7 400 aa13.72□□□□□ -0.21
MSH3-201ENST00000265081 KSR2Q6VAB6 950 aa13.72□□□□□ -0.21
MSH3-201ENST00000265081 C14orf37Q86TY3 774 aa13.72□□□□□ -0.21
MSH3-201ENST00000265081 NBPF7P0C2Y1 421 aaPredicted RBP13.72□□□□□ -0.21
MSH3-201ENST00000265081 PHKG2P15735 406 aa13.72□□□□□ -0.21
MSH3-201ENST00000265081 TEFQ10587 303 aa13.72□□□□□ -0.21
MSH3-201ENST00000265081 SLC52A2Q9HAB3 445 aa13.72□□□□□ -0.21
MSH3-201ENST00000265081 HYPKQ9NX55 129 aa13.72□□□□□ -0.21
MSH3-201ENST00000265081 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.71□□□□□ -0.21
MSH3-201ENST00000265081 PPP1R42Q7Z4L9 355 aa13.71□□□□□ -0.21
MSH3-201ENST00000265081 PTMSP20962 102 aa13.71□□□□□ -0.21
MSH3-201ENST00000265081 TNS2Q63HR2 1409 aa13.71□□□□□ -0.21
MSH3-201ENST00000265081 COL22A1Q8NFW1 1626 aaPredicted RBP13.71□□□□□ -0.21
MSH3-201ENST00000265081 PI4KAP2A4QPH2 592 aa13.71□□□□□ -0.22
MSH3-201ENST00000265081 PI4KAP1Q8N8J0 262 aa13.71□□□□□ -0.22
MSH3-201ENST00000265081 DDX21Q9NR30 783 aaKnown RBP eCLIP13.7□□□□□ -0.22
MSH3-201ENST00000265081 TTC41PQ6P2S7 1318 aa13.7□□□□□ -0.22
MSH3-201ENST00000265081 LRP6O75581 1613 aa13.7□□□□□ -0.22
MSH3-201ENST00000265081 COL5A2P05997 1499 aaPredicted RBP13.7□□□□□ -0.22
MSH3-201ENST00000265081 PROSER3Q2NL68 480 aa13.69□□□□□ -0.22
MSH3-201ENST00000265081 RHPN1Q8TCX5 695 aa13.69□□□□□ -0.22
MSH3-201ENST00000265081 NECTIN2Q92692 538 aa13.69□□□□□ -0.22
MSH3-201ENST00000265081 KIF1BPQ96EK5 621 aa13.69□□□□□ -0.22
MSH3-201ENST00000265081 SNRKQ9NRH2 765 aa13.69□□□□□ -0.22
MSH3-201ENST00000265081 HSP90AB1P08238 724 aaKnown RBP13.69□□□□□ -0.22
MSH3-201ENST00000265081 KAZALD1Q96I82 304 aa13.69□□□□□ -0.22
MSH3-201ENST00000265081 XPCQ01831 940 aaPredicted RBP13.69□□□□□ -0.22
MSH3-201ENST00000265081 CWC22Q9HCG8 908 aaKnown RBP13.69□□□□□ -0.22
MSH3-201ENST00000265081 ISY1Q9ULR0 285 aaKnown RBP13.69□□□□□ -0.22
MSH3-201ENST00000265081 CICQ96RK0 1608 aaPredicted RBP13.69□□□□□ -0.22
MSH3-201ENST00000265081 JCADQ9P266 1359 aa13.69□□□□□ -0.22
MSH3-201ENST00000265081 CUL4AQ13619 759 aa13.68□□□□□ -0.22
MSH3-201ENST00000265081 HSP90AB4PQ58FF6 505 aa13.68□□□□□ -0.22
MSH3-201ENST00000265081 CADPS2Q86UW7 1296 aa13.68□□□□□ -0.22
MSH3-201ENST00000265081 ZNF790Q6PG37 636 aa13.68□□□□□ -0.22
MSH3-201ENST00000265081 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
MSH3-201ENST00000265081 UNC5CLQ8IV45 518 aa13.68□□□□□ -0.22
MSH3-201ENST00000265081 KCNB2Q92953 911 aa13.68□□□□□ -0.22
MSH3-201ENST00000265081 LINS1Q8NG48 757 aa13.67□□□□□ -0.22
MSH3-201ENST00000265081 SOS2Q07890 1332 aaPredicted RBP13.67□□□□□ -0.22
MSH3-201ENST00000265081 TRAK2O60296 914 aa13.67□□□□□ -0.22
MSH3-201ENST00000265081 MAP3K2Q9Y2U5 619 aa13.67□□□□□ -0.22
MSH3-201ENST00000265081 PRAMEF22A3QJZ6 481 aa13.66□□□□□ -0.22
MSH3-201ENST00000265081 SPG7Q9UQ90 795 aa13.66□□□□□ -0.22
MSH3-201ENST00000265081 SPEF2Q9C093 1822 aa13.66□□□□□ -0.22
MSH3-201ENST00000265081 ATF3P18847 181 aa13.66□□□□□ -0.22
MSH3-201ENST00000265081 MCM2P49736 904 aa13.66□□□□□ -0.22
MSH3-201ENST00000265081 SPRYD3Q8NCJ5 442 aa13.66□□□□□ -0.22
MSH3-201ENST00000265081 HSPA4P34932 840 aa13.65□□□□□ -0.22
MSH3-201ENST00000265081 DCAF5Q96JK2 942 aa13.65□□□□□ -0.22
MSH3-201ENST00000265081 IL25Q9H293 177 aa13.65□□□□□ -0.22
MSH3-201ENST00000265081 HDAC5Q9UQL6 1122 aa13.65□□□□□ -0.22
MSH3-201ENST00000265081 EIF2S2P20042 333 aaKnown RBP13.65□□□□□ -0.22
MSH3-201ENST00000265081 SRGAP3O43295 1099 aa13.65□□□□□ -0.22
MSH3-201ENST00000265081 IGKV5-2P06315 115 aa13.65□□□□□ -0.22
MSH3-201ENST00000265081 NKX1-1Q15270 411 aaPredicted RBP13.65□□□□□ -0.22
MSH3-201ENST00000265081 SKOR2Q2VWA4 1001 aaPredicted RBP13.65□□□□□ -0.22
MSH3-201ENST00000265081 GBP4Q96PP9 640 aa13.65□□□□□ -0.22
MSH3-201ENST00000265081 ANKRD36CQ5JPF3 1778 aa13.65□□□□□ -0.22
MSH3-201ENST00000265081 ITGB4P16144 1822 aa13.65□□□□□ -0.22
MSH3-201ENST00000265081 ST18O60284 1047 aa13.64□□□□□ -0.23
MSH3-201ENST00000265081 IFNL2Q8IZJ0 200 aa13.64□□□□□ -0.23
MSH3-201ENST00000265081 RAD50Q92878 1312 aa13.64□□□□□ -0.23
MSH3-201ENST00000265081 ERBB4Q15303 1308 aa13.64□□□□□ -0.23
MSH3-201ENST00000265081 CYP27B1O15528 508 aa13.64□□□□□ -0.23
MSH3-201ENST00000265081 SGSM2O43147 1006 aa13.64□□□□□ -0.23
MSH3-201ENST00000265081 L1TD1Q5T7N2 865 aaKnown RBP13.64□□□□□ -0.23
MSH3-201ENST00000265081 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
MSH3-201ENST00000265081 INTS4Q96HW7 963 aaKnown RBP13.64□□□□□ -0.23
MSH3-201ENST00000265081 DNAJC5Q9H3Z4 198 aa13.64□□□□□ -0.23
MSH3-201ENST00000265081 TATP17735 454 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms