RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 EIF2AK4Q9P2K8 1649 aaKnown RBP20.24■□□□□ 0.83
NOTCH3-201ENST00000263388 RRS1Q15050 365 aaKnown RBP20.24■□□□□ 0.83
NOTCH3-201ENST00000263388 METTL24Q5JXM2 366 aa20.24■□□□□ 0.83
NOTCH3-201ENST00000263388 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
NOTCH3-201ENST00000263388 NUP88Q99567 741 aaPredicted RBP20.24■□□□□ 0.83
NOTCH3-201ENST00000263388 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
NOTCH3-201ENST00000263388 USP5P45974 858 aa20.24■□□□□ 0.83
NOTCH3-201ENST00000263388 NAA15Q9BXJ9 866 aaKnown RBP20.24■□□□□ 0.83
NOTCH3-201ENST00000263388 PTPRCP08575 1304 aa20.23■□□□□ 0.83
NOTCH3-201ENST00000263388 PAFAH1B1P43034 410 aa20.23■□□□□ 0.83
NOTCH3-201ENST00000263388 KLHL10Q6JEL2 608 aa20.23■□□□□ 0.83
NOTCH3-201ENST00000263388 CAVIN4Q5BKX8 364 aa20.23■□□□□ 0.83
NOTCH3-201ENST00000263388 STX1AQ16623 288 aa20.23■□□□□ 0.83
NOTCH3-201ENST00000263388 TMEM266Q2M3C6 531 aa20.23■□□□□ 0.83
NOTCH3-201ENST00000263388 KIF4BQ2VIQ3 1234 aa20.23■□□□□ 0.83
NOTCH3-201ENST00000263388 CCDC97Q96F63 343 aaPredicted RBP20.23■□□□□ 0.83
NOTCH3-201ENST00000263388 PYM1Q9BRP8 204 aaKnown RBP20.22■□□□□ 0.83
NOTCH3-201ENST00000263388 POGZQ7Z3K3 1410 aa20.22■□□□□ 0.83
NOTCH3-201ENST00000263388 IQCA1Q86XH1 822 aa20.22■□□□□ 0.83
NOTCH3-201ENST00000263388 PPP4R3AQ6IN85 833 aa20.22■□□□□ 0.83
NOTCH3-201ENST00000263388 KCNH5Q8NCM2 988 aa20.22■□□□□ 0.83
NOTCH3-201ENST00000263388 A0A087WZG4 1122 aa20.22■□□□□ 0.83
NOTCH3-201ENST00000263388 LIMCH1Q9UPQ0 1083 aa20.22■□□□□ 0.83
NOTCH3-201ENST00000263388 HMGXB3Q12766 1538 aa20.22■□□□□ 0.83
NOTCH3-201ENST00000263388 KIF20AO95235 890 aa20.21■□□□□ 0.83
NOTCH3-201ENST00000263388 DUSP27Q5VZP5 1158 aa20.21■□□□□ 0.83
NOTCH3-201ENST00000263388 ALS2CR12Q96Q35 445 aa20.21■□□□□ 0.83
NOTCH3-201ENST00000263388 CCDC113Q9H0I3 377 aa20.21■□□□□ 0.83
NOTCH3-201ENST00000263388 ABCF2Q9UG63 623 aa20.21■□□□□ 0.83
NOTCH3-201ENST00000263388 CDK13Q14004 1512 aaKnown RBP20.21■□□□□ 0.83
NOTCH3-201ENST00000263388 TOPBP1Q92547 1522 aa20.21■□□□□ 0.83
NOTCH3-201ENST00000263388 LRPPRCP42704 1394 aaKnown RBP20.2■□□□□ 0.82
NOTCH3-201ENST00000263388 CCDC178Q5BJE1 867 aa20.2■□□□□ 0.82
NOTCH3-201ENST00000263388 CTCFLQ8NI51 663 aaPredicted RBP20.2■□□□□ 0.82
NOTCH3-201ENST00000263388 DDX19AQ9NUU7 478 aaKnown RBP20.2■□□□□ 0.82
NOTCH3-201ENST00000263388 SLC12A7Q9Y666 1083 aa20.2■□□□□ 0.82
NOTCH3-201ENST00000263388 GSTTP1A0A1W2PQM5 241 aa20.2■□□□□ 0.82
NOTCH3-201ENST00000263388 MKNK2Q9HBH9 465 aa20.2■□□□□ 0.82
NOTCH3-201ENST00000263388 CNNM3Q8NE01 707 aa20.2■□□□□ 0.82
NOTCH3-201ENST00000263388 CFAP57Q96MR6 1250 aa20.2■□□□□ 0.82
NOTCH3-201ENST00000263388 RNF41Q9H4P4 317 aaPredicted RBP20.2■□□□□ 0.82
NOTCH3-201ENST00000263388 HOOK3Q86VS8 718 aa20.2■□□□□ 0.82
NOTCH3-201ENST00000263388 GOPCQ9HD26 462 aa20.2■□□□□ 0.82
NOTCH3-201ENST00000263388 ANKRD18BA2A2Z9 1011 aa20.19■□□□□ 0.82
NOTCH3-201ENST00000263388 YEATS4O95619 227 aa20.19■□□□□ 0.82
NOTCH3-201ENST00000263388 URI1O94763 535 aaPredicted RBP20.19■□□□□ 0.82
NOTCH3-201ENST00000263388 MAP3K12Q12852 859 aa20.19■□□□□ 0.82
NOTCH3-201ENST00000263388 NBPF8Q3BBV2 869 aa20.19■□□□□ 0.82
NOTCH3-201ENST00000263388 NUTM1Q86Y26 1132 aa20.19■□□□□ 0.82
NOTCH3-201ENST00000263388 TMOD2Q9NZR1 351 aa20.19■□□□□ 0.82
NOTCH3-201ENST00000263388 SSRP1Q08945 709 aaKnown RBP20.19■□□□□ 0.82
NOTCH3-201ENST00000263388 CETN1Q12798 172 aa20.19■□□□□ 0.82
NOTCH3-201ENST00000263388 PIBF1Q8WXW3 757 aa20.19■□□□□ 0.82
NOTCH3-201ENST00000263388 CCDC61Q9Y6R9 512 aa20.18■□□□□ 0.82
NOTCH3-201ENST00000263388 KANK3Q6NY19 840 aa20.18■□□□□ 0.82
NOTCH3-201ENST00000263388 SPINK5Q9NQ38 1064 aaPredicted RBP20.18■□□□□ 0.82
NOTCH3-201ENST00000263388 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
NOTCH3-201ENST00000263388 PRDM11Q9NQV5 511 aa20.18■□□□□ 0.82
NOTCH3-201ENST00000263388 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
NOTCH3-201ENST00000263388 TNNT1P13805 278 aa20.18■□□□□ 0.82
NOTCH3-201ENST00000263388 ZNF213O14771 459 aa20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 AMOTQ4VCS5 1084 aa20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 CATIPQ7Z7H3 387 aa20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 HYPKQ9NX55 129 aa20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 PAXBP1Q9Y5B6 917 aa20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 RARSP54136 660 aaKnown RBP20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 SMC1AQ14683 1233 aaKnown RBP20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 MINDY4BA8MYZ0 360 aa20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 SF3B2Q13435 895 aaKnown RBP20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 FAM114A1Q8IWE2 563 aa20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 AMPD3Q01432 767 aa20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 TAF7Q15545 349 aaPredicted RBP20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 C16orf45Q96MC5 204 aaPredicted RBP20.17■□□□□ 0.82
NOTCH3-201ENST00000263388 IFIT1P09914 478 aaKnown RBP20.16■□□□□ 0.82
NOTCH3-201ENST00000263388 UBE2HP62256 183 aa20.16■□□□□ 0.82
NOTCH3-201ENST00000263388 EHBP1Q8NDI1 1231 aa20.16■□□□□ 0.82
NOTCH3-201ENST00000263388 FERMT3Q86UX7 667 aa20.16■□□□□ 0.82
NOTCH3-201ENST00000263388 BOLA2Q9H3K6 86 aa20.16■□□□□ 0.82
NOTCH3-201ENST00000263388 IFIT5Q13325 482 aaKnown RBP20.16■□□□□ 0.82
NOTCH3-201ENST00000263388 CCDC175P0C221 793 aa20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 SLF2Q8IX21 1173 aa20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 PRXQ9BXM0 1461 aa20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 EHMT1Q9H9B1 1298 aa20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 SSH1Q8WYL5 1049 aa20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 GOLGA8BA8MQT2 603 aa20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 POLR3DP05423 398 aaPredicted RBP20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 CTR9Q6PD62 1173 aa20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 CCDC12Q8WUD4 166 aaPredicted RBP20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 EVI5LQ96CN4 794 aa20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 MAP3K1Q13233 1512 aa20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 DYNC1I1O14576 645 aa20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 DZIP1Q86YF9 867 aaKnown RBP20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 DHX37Q8IY37 1157 aaKnown RBP20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 NAIPQ13075 1403 aa20.15■□□□□ 0.82
NOTCH3-201ENST00000263388 POLR3GO15318 223 aaPredicted RBP20.14■□□□□ 0.82
NOTCH3-201ENST00000263388 PRKCSHP14314 528 aaPredicted RBP20.14■□□□□ 0.82
NOTCH3-201ENST00000263388 GIGYF2Q6Y7W6 1299 aaKnown RBP20.14■□□□□ 0.82
NOTCH3-201ENST00000263388 CUL5Q93034 780 aa20.14■□□□□ 0.81
NOTCH3-201ENST00000263388 NSD2O96028 1365 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms