RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 ITGB4P16144 1822 aa16.19■□□□□ 0.18
CLNS1A-201ENST00000263309 GIGYF1O75420 1035 aaPredicted RBP16.18■□□□□ 0.18
CLNS1A-201ENST00000263309 EIF2S2P20042 333 aaKnown RBP16.18■□□□□ 0.18
CLNS1A-201ENST00000263309 IL6STP40189 918 aaPredicted RBP16.18■□□□□ 0.18
CLNS1A-201ENST00000263309 NLGN1Q8N2Q7 840 aa16.18■□□□□ 0.18
CLNS1A-201ENST00000263309 STK31Q9BXU1 1019 aa16.18■□□□□ 0.18
CLNS1A-201ENST00000263309 ZNF652Q9Y2D9 606 aa16.18■□□□□ 0.18
CLNS1A-201ENST00000263309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.17■□□□□ 0.18
CLNS1A-201ENST00000263309 CCDC30Q5VVM6 783 aa16.17■□□□□ 0.18
CLNS1A-201ENST00000263309 MTFR1LQ9H019 292 aa16.17■□□□□ 0.18
CLNS1A-201ENST00000263309 MBIPQ9NS73 344 aa16.17■□□□□ 0.18
CLNS1A-201ENST00000263309 ERBB4Q15303 1308 aa16.17■□□□□ 0.18
CLNS1A-201ENST00000263309 DCAF8L1A6NGE4 600 aa16.16■□□□□ 0.18
CLNS1A-201ENST00000263309 KCNQ3O43525 872 aa16.16■□□□□ 0.18
CLNS1A-201ENST00000263309 KIF6Q6ZMV9 814 aa16.16■□□□□ 0.18
CLNS1A-201ENST00000263309 TOGARAM1Q9Y4F4 1720 aa16.16■□□□□ 0.18
CLNS1A-201ENST00000263309 NPHP1O15259 732 aa16.15■□□□□ 0.18
CLNS1A-201ENST00000263309 HDGFL1Q5TGJ6 251 aa16.15■□□□□ 0.18
CLNS1A-201ENST00000263309 DUSP27Q5VZP5 1158 aa16.15■□□□□ 0.18
CLNS1A-201ENST00000263309 DBF4Q9UBU7 674 aaPredicted RBP16.15■□□□□ 0.18
CLNS1A-201ENST00000263309 USP16Q9Y5T5 823 aa16.15■□□□□ 0.18
CLNS1A-201ENST00000263309 ADAMTS7Q9UKP4 1686 aa16.14■□□□□ 0.18
CLNS1A-201ENST00000263309 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
CLNS1A-201ENST00000263309 ZNF853P0CG23 659 aa16.14■□□□□ 0.17
CLNS1A-201ENST00000263309 ZNF827Q17R98 1081 aa16.14■□□□□ 0.17
CLNS1A-201ENST00000263309 ANO8Q9HCE9 1232 aaPredicted RBP16.14■□□□□ 0.17
CLNS1A-201ENST00000263309 DDX58O95786 925 aaKnown RBP16.13■□□□□ 0.17
CLNS1A-201ENST00000263309 ARHGEF1Q92888 912 aaKnown RBP16.13■□□□□ 0.17
CLNS1A-201ENST00000263309 SLC4A9Q96Q91 983 aa16.13■□□□□ 0.17
CLNS1A-201ENST00000263309 HYPKQ9NX55 129 aa16.13■□□□□ 0.17
CLNS1A-201ENST00000263309 LY75O60449 1722 aa16.13■□□□□ 0.17
CLNS1A-201ENST00000263309 ELL2O00472 640 aaPredicted RBP16.12■□□□□ 0.17
CLNS1A-201ENST00000263309 A1BGP04217 495 aa16.12■□□□□ 0.17
CLNS1A-201ENST00000263309 TWISTNBQ3B726 338 aaPredicted RBP16.12■□□□□ 0.17
CLNS1A-201ENST00000263309 INTS5Q6P9B9 1019 aaKnown RBP16.12■□□□□ 0.17
CLNS1A-201ENST00000263309 COL23A1Q86Y22 540 aaPredicted RBP16.12■□□□□ 0.17
CLNS1A-201ENST00000263309 ZBTB7AO95365 584 aa16.11■□□□□ 0.17
CLNS1A-201ENST00000263309 MYL6BP14649 208 aa16.11■□□□□ 0.17
CLNS1A-201ENST00000263309 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
CLNS1A-201ENST00000263309 ZNF428Q96B54 188 aa16.11■□□□□ 0.17
CLNS1A-201ENST00000263309 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
CLNS1A-201ENST00000263309 ZBTB1Q9Y2K1 713 aa16.11■□□□□ 0.17
CLNS1A-201ENST00000263309 PARP3Q9Y6F1 533 aa16.11■□□□□ 0.17
CLNS1A-201ENST00000263309 PNPLA7Q6ZV29 1317 aa16.11■□□□□ 0.17
CLNS1A-201ENST00000263309 UTRNP46939 3433 aa16.1■□□□□ 0.17
CLNS1A-201ENST00000263309 TSR2Q969E8 191 aaKnown RBP16.1■□□□□ 0.17
CLNS1A-201ENST00000263309 PDGFDQ9GZP0 370 aaPredicted RBP16.1■□□□□ 0.17
CLNS1A-201ENST00000263309 NARFQ9UHQ1 456 aa16.1■□□□□ 0.17
CLNS1A-201ENST00000263309 ZNF831Q5JPB2 1677 aa16.1■□□□□ 0.17
CLNS1A-201ENST00000263309 DLG5Q8TDM6 1919 aa16.09■□□□□ 0.17
CLNS1A-201ENST00000263309 CT47B1P0C2W7 299 aaPredicted RBP16.09■□□□□ 0.17
CLNS1A-201ENST00000263309 EIF5P55010 431 aaKnown RBP16.09■□□□□ 0.17
CLNS1A-201ENST00000263309 HSP90AB3PQ58FF7 597 aa16.09■□□□□ 0.17
CLNS1A-201ENST00000263309 NECTIN2Q92692 538 aa16.09■□□□□ 0.17
CLNS1A-201ENST00000263309 DDX21Q9NR30 783 aaKnown RBP eCLIP16.09■□□□□ 0.17
CLNS1A-201ENST00000263309 KCPQ6ZWJ8 1503 aa16.09■□□□□ 0.17
CLNS1A-201ENST00000263309 RGL2O15211 777 aa16.08■□□□□ 0.16
CLNS1A-201ENST00000263309 GTF2E1P29083 439 aaPredicted RBP16.08■□□□□ 0.16
CLNS1A-201ENST00000263309 PTGER2P43116 358 aa16.08■□□□□ 0.16
CLNS1A-201ENST00000263309 CLEC4GQ6UXB4 293 aa16.08■□□□□ 0.16
CLNS1A-201ENST00000263309 SETDB2Q96T68 719 aa16.08■□□□□ 0.16
CLNS1A-201ENST00000263309 COL15A1P39059 1388 aa16.08■□□□□ 0.16
CLNS1A-201ENST00000263309 C5P01031 1676 aa16.08■□□□□ 0.16
CLNS1A-201ENST00000263309 C4BP0C0L5 1744 aa16.08■□□□□ 0.16
CLNS1A-201ENST00000263309 CASZ1Q86V15 1759 aa16.08■□□□□ 0.16
CLNS1A-201ENST00000263309 EXOSC9Q06265 439 aaKnown RBP16.07■□□□□ 0.16
CLNS1A-201ENST00000263309 TBC1D2BQ9UPU7 963 aa16.07■□□□□ 0.16
CLNS1A-201ENST00000263309 FANCIQ9NVI1 1328 aa16.07■□□□□ 0.16
CLNS1A-201ENST00000263309 PRAMEF22A3QJZ6 481 aa16.06■□□□□ 0.16
CLNS1A-201ENST00000263309 ERVV-1B6SEH8 477 aa16.06■□□□□ 0.16
CLNS1A-201ENST00000263309 SLFN5Q08AF3 891 aa16.06■□□□□ 0.16
CLNS1A-201ENST00000263309 AIMP1Q12904 312 aaKnown RBP16.06■□□□□ 0.16
CLNS1A-201ENST00000263309 USPL1Q5W0Q7 1092 aa16.06■□□□□ 0.16
CLNS1A-201ENST00000263309 USP42Q9H9J4 1324 aaKnown RBP16.05■□□□□ 0.16
CLNS1A-201ENST00000263309 HSP90B1P14625 803 aaKnown RBP16.05■□□□□ 0.16
CLNS1A-201ENST00000263309 NEXNQ0ZGT2 675 aa16.05■□□□□ 0.16
CLNS1A-201ENST00000263309 RIC3Q7Z5B4 369 aa16.05■□□□□ 0.16
CLNS1A-201ENST00000263309 C8orf58Q8NAV2 365 aa16.05■□□□□ 0.16
CLNS1A-201ENST00000263309 SIPA1L3O60292 1781 aaPredicted RBP16.05■□□□□ 0.16
CLNS1A-201ENST00000263309 PAPPAQ13219 1627 aa16.05■□□□□ 0.16
CLNS1A-201ENST00000263309 ZBED9Q6R2W3 1325 aa16.04■□□□□ 0.16
CLNS1A-201ENST00000263309 VIRMAQ69YN4 1812 aaKnown RBP16.04■□□□□ 0.16
CLNS1A-201ENST00000263309 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
CLNS1A-201ENST00000263309 ANKRD13DQ6ZTN6 518 aa16.04■□□□□ 0.16
CLNS1A-201ENST00000263309 KLHL34Q8N239 644 aa16.04■□□□□ 0.16
CLNS1A-201ENST00000263309 CHPF2Q9P2E5 772 aa16.04■□□□□ 0.16
CLNS1A-201ENST00000263309 MSL1Q68DK7 614 aa16.03■□□□□ 0.16
CLNS1A-201ENST00000263309 TPTE2Q6XPS3 522 aa16.03■□□□□ 0.16
CLNS1A-201ENST00000263309 COPS6Q7L5N1 327 aa16.03■□□□□ 0.16
CLNS1A-201ENST00000263309 NYXQ9GZU5 481 aa16.03■□□□□ 0.16
CLNS1A-201ENST00000263309 ZNF521Q96K83 1311 aa16.02■□□□□ 0.16
CLNS1A-201ENST00000263309 GYS1P13807 737 aa16.02■□□□□ 0.16
CLNS1A-201ENST00000263309 ST5P78524 1137 aa16.02■□□□□ 0.16
CLNS1A-201ENST00000263309 BICDL1Q6ZP65 573 aa16.02■□□□□ 0.16
CLNS1A-201ENST00000263309 PPP1R42Q7Z4L9 355 aa16.02■□□□□ 0.16
CLNS1A-201ENST00000263309 MAP3K15Q6ZN16 1313 aa16.01■□□□□ 0.15
CLNS1A-201ENST00000263309 UBR2Q8IWV8 1755 aa16.01■□□□□ 0.15
CLNS1A-201ENST00000263309 VAMP4O75379 141 aa16.01■□□□□ 0.15
CLNS1A-201ENST00000263309 MMP10P09238 476 aa16.01■□□□□ 0.15
CLNS1A-201ENST00000263309 PIP4K2AP48426 406 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms