RNA–Protein interactions for RNA: ENST00000261597.8

NDC80-201, Transcript of NDC80, kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC80, Length 2,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-201ENST00000261597 CCDC136Q96JN2 1154 aa8.58□□□□□ -1.04
NDC80-201ENST00000261597 SPATA31A5Q5VU36 1347 aa8.57□□□□□ -1.04
NDC80-201ENST00000261597 SPATA31A7Q8IWB4 1347 aa8.57□□□□□ -1.04
NDC80-201ENST00000261597 EXOC5O00471 708 aa8.57□□□□□ -1.04
NDC80-201ENST00000261597 CCDC30Q5VVM6 783 aa8.57□□□□□ -1.04
NDC80-201ENST00000261597 FTSJ3Q8IY81 847 aaKnown RBP8.57□□□□□ -1.04
NDC80-201ENST00000261597 DDX54Q8TDD1 881 aaKnown RBP8.57□□□□□ -1.04
NDC80-201ENST00000261597 BCL11BQ9C0K0 894 aaPredicted RBP8.57□□□□□ -1.04
NDC80-201ENST00000261597 MRC1P22897 1456 aa8.57□□□□□ -1.04
NDC80-201ENST00000261597 KCNQ3O43525 872 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 CHRM1P11229 460 aaPredicted RBP8.56□□□□□ -1.04
NDC80-201ENST00000261597 B4GALNT3Q6L9W6 998 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 BARGINQ6ZT62 677 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 C8orf37Q96NL8 207 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 STK31Q9BXU1 1019 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 COG6Q9Y2V7 657 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 SHANK3Q9BYB0 1731 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 HEG1Q9ULI3 1381 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 CACNA1FO60840 1977 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.56□□□□□ -1.04
NDC80-201ENST00000261597 TCERG1O14776 1098 aaKnown RBP8.56□□□□□ -1.04
NDC80-201ENST00000261597 RLBP1P12271 317 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 DSG3P32926 999 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 VPS72Q15906 364 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 ZNF790Q6PG37 636 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 CLUAP1Q96AJ1 413 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 ZFP91Q96JP5 570 aaPredicted RBP8.56□□□□□ -1.04
NDC80-201ENST00000261597 API5Q9BZZ5 524 aaKnown RBP8.56□□□□□ -1.04
NDC80-201ENST00000261597 TNNQ9UQP3 1299 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 STK24Q9Y6E0 443 aa8.56□□□□□ -1.04
NDC80-201ENST00000261597 BCL9LQ86UU0 1499 aa8.55□□□□□ -1.04
NDC80-201ENST00000261597 MVPQ14764 893 aaKnown RBP8.55□□□□□ -1.04
NDC80-201ENST00000261597 PTPRCP08575 1304 aa8.55□□□□□ -1.04
NDC80-201ENST00000261597 WNK3Q9BYP7 1800 aa8.55□□□□□ -1.04
NDC80-201ENST00000261597 GIGYF1O75420 1035 aaPredicted RBP8.55□□□□□ -1.04
NDC80-201ENST00000261597 DDX19BQ9UMR2 479 aa8.55□□□□□ -1.04
NDC80-201ENST00000261597 CCDC9Q9Y3X0 531 aaKnown RBP8.55□□□□□ -1.04
NDC80-201ENST00000261597 LRP6O75581 1613 aa8.54□□□□□ -1.04
NDC80-201ENST00000261597 HDGFL1Q5TGJ6 251 aa8.54□□□□□ -1.04
NDC80-201ENST00000261597 TTC5Q8N0Z6 440 aa8.54□□□□□ -1.04
NDC80-201ENST00000261597 ZC3H15Q8WU90 426 aaKnown RBP8.54□□□□□ -1.04
NDC80-201ENST00000261597 CHMP4BQ9H444 224 aaKnown RBP8.54□□□□□ -1.04
NDC80-201ENST00000261597 USP21Q9UK80 565 aa8.54□□□□□ -1.04
NDC80-201ENST00000261597 SLC39A6Q13433 755 aa8.54□□□□□ -1.04
NDC80-201ENST00000261597 DDB1Q16531 1140 aa8.54□□□□□ -1.04
NDC80-201ENST00000261597 MEX3CQ5U5Q3 659 aaKnown RBP8.54□□□□□ -1.04
NDC80-201ENST00000261597 TMEM57Q8N5G2 664 aa8.54□□□□□ -1.04
NDC80-201ENST00000261597 TNS2Q63HR2 1409 aa8.53□□□□□ -1.04
NDC80-201ENST00000261597 EIF2S2P20042 333 aaKnown RBP8.53□□□□□ -1.04
NDC80-201ENST00000261597 ITPRIPQ8IWB1 547 aa8.53□□□□□ -1.04
NDC80-201ENST00000261597 PELP1Q8IZL8 1130 aaKnown RBP8.53□□□□□ -1.04
NDC80-201ENST00000261597 FMNL2Q96PY5 1086 aa8.53□□□□□ -1.04
NDC80-201ENST00000261597 ABCC4O15439 1325 aa8.53□□□□□ -1.04
NDC80-201ENST00000261597 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.53□□□□□ -1.04
NDC80-201ENST00000261597 ZNF496Q96IT1 587 aaPredicted RBP8.52□□□□□ -1.04
NDC80-201ENST00000261597 TMOD3Q9NYL9 352 aa8.52□□□□□ -1.04
NDC80-201ENST00000261597 SNRPA1P09661 255 aaKnown RBP8.52□□□□□ -1.05
NDC80-201ENST00000261597 INTS3Q68E01 1043 aaKnown RBP8.52□□□□□ -1.05
NDC80-201ENST00000261597 G2E3Q7L622 706 aa8.52□□□□□ -1.05
NDC80-201ENST00000261597 NECTIN2Q92692 538 aa8.52□□□□□ -1.05
NDC80-201ENST00000261597 PODXL2Q9NZ53 605 aa8.52□□□□□ -1.05
NDC80-201ENST00000261597 DBF4Q9UBU7 674 aaPredicted RBP8.52□□□□□ -1.05
NDC80-201ENST00000261597 FLIIQ13045 1269 aa8.51□□□□□ -1.05
NDC80-201ENST00000261597 WDR70Q9NW82 654 aa8.51□□□□□ -1.05
NDC80-201ENST00000261597 ZBTB7BO15156 539 aaPredicted RBP8.51□□□□□ -1.05
NDC80-201ENST00000261597 CHPF2Q9P2E5 772 aa8.51□□□□□ -1.05
NDC80-201ENST00000261597 RGS12O14924 1447 aa8.5□□□□□ -1.05
NDC80-201ENST00000261597 TOGARAM1Q9Y4F4 1720 aa8.5□□□□□ -1.05
NDC80-201ENST00000261597 AFF2P51816 1311 aa8.5□□□□□ -1.05
NDC80-201ENST00000261597 PRAMEF22A3QJZ6 481 aa8.5□□□□□ -1.05
NDC80-201ENST00000261597 FKBP5Q13451 457 aaPredicted RBP8.5□□□□□ -1.05
NDC80-201ENST00000261597 FAM98CQ17RN3 349 aaKnown RBP8.5□□□□□ -1.05
NDC80-201ENST00000261597 MARCH10Q8NA82 808 aaPredicted RBP8.5□□□□□ -1.05
NDC80-201ENST00000261597 PIGBQ92521 554 aa8.5□□□□□ -1.05
NDC80-201ENST00000261597 ZBTB40Q9NUA8 1239 aa8.5□□□□□ -1.05
NDC80-201ENST00000261597 HYPKQ9NX55 129 aa8.5□□□□□ -1.05
NDC80-201ENST00000261597 PAPPAQ13219 1627 aa8.5□□□□□ -1.05
NDC80-201ENST00000261597 CCT4P50991 539 aaKnown RBP8.49□□□□□ -1.05
NDC80-201ENST00000261597 CENPQQ7L2Z9 268 aaPredicted RBP8.49□□□□□ -1.05
NDC80-201ENST00000261597 FAM212AQ96EL1 285 aa8.49□□□□□ -1.05
NDC80-201ENST00000261597 GJD4Q96KN9 370 aaPredicted RBP8.49□□□□□ -1.05
NDC80-201ENST00000261597 DDX21Q9NR30 783 aaKnown RBP eCLIP8.49□□□□□ -1.05
NDC80-201ENST00000261597 TRPC5Q9UL62 973 aaPredicted RBP8.49□□□□□ -1.05
NDC80-201ENST00000261597 ITGB4P16144 1822 aa8.49□□□□□ -1.05
NDC80-201ENST00000261597 UBR2Q8IWV8 1755 aa8.49□□□□□ -1.05
NDC80-201ENST00000261597 PHAXQ9H814 394 aaKnown RBP8.49□□□□□ -1.05
NDC80-201ENST00000261597 SLC24A3Q9HC58 644 aa8.49□□□□□ -1.05
NDC80-201ENST00000261597 PCDHB15Q9Y5E8 787 aa8.49□□□□□ -1.05
NDC80-201ENST00000261597 USP16Q9Y5T5 823 aa8.49□□□□□ -1.05
NDC80-201ENST00000261597 BCL9O00512 1426 aa8.49□□□□□ -1.05
NDC80-201ENST00000261597 KDM2BQ8NHM5 1336 aa8.48□□□□□ -1.05
NDC80-201ENST00000261597 ONECUT3O60422 494 aaPredicted RBP8.48□□□□□ -1.05
NDC80-201ENST00000261597 TEX13AQ9BXU3 409 aaPredicted RBP8.48□□□□□ -1.05
NDC80-201ENST00000261597 KCPQ6ZWJ8 1503 aa8.48□□□□□ -1.05
NDC80-201ENST00000261597 ERBB4Q15303 1308 aa8.48□□□□□ -1.05
NDC80-201ENST00000261597 C5P01031 1676 aa8.48□□□□□ -1.05
NDC80-201ENST00000261597 SRCAPQ6ZRS2 3230 aa8.48□□□□□ -1.05
NDC80-201ENST00000261597 F6X3S4 739 aa8.48□□□□□ -1.05
NDC80-201ENST00000261597 PRIM1P49642 420 aaKnown RBP8.48□□□□□ -1.05
NDC80-201ENST00000261597 PDIA6Q15084 440 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms