RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 RIMS1Q86UR5 1692 aaKnown RBP28.18■■■□□ 2.1
PREB-201ENST00000260643 TTC14Q96N46 770 aa28.18■■■□□ 2.1
PREB-201ENST00000260643 USP44Q9H0E7 712 aa28.18■■■□□ 2.1
PREB-201ENST00000260643 CACNA1FO60840 1977 aa28.17■■■□□ 2.1
PREB-201ENST00000260643 GDPD2Q9HCC8 539 aa28.17■■■□□ 2.1
PREB-201ENST00000260643 CEP170BQ9Y4F5 1589 aaPredicted RBP28.16■■■□□ 2.1
PREB-201ENST00000260643 SGSM2O43147 1006 aa28.16■■■□□ 2.1
PREB-201ENST00000260643 ADAMTS13Q76LX8 1427 aa28.16■■■□□ 2.1
PREB-201ENST00000260643 PIBF1Q8WXW3 757 aa28.16■■■□□ 2.1
PREB-201ENST00000260643 PTPRUQ92729 1446 aa28.15■■■□□ 2.1
PREB-201ENST00000260643 ZSCAN22P10073 491 aaPredicted RBP28.15■■■□□ 2.1
PREB-201ENST00000260643 POLA2Q14181 598 aa28.15■■■□□ 2.1
PREB-201ENST00000260643 EYA1Q99502 592 aa28.15■■■□□ 2.1
PREB-201ENST00000260643 UBE2HP62256 183 aa28.14■■■□□ 2.1
PREB-201ENST00000260643 PI4K2BQ8TCG2 481 aa28.14■■■□□ 2.1
PREB-201ENST00000260643 SNX14Q9Y5W7 946 aa28.14■■■□□ 2.09
PREB-201ENST00000260643 TMEM2Q9UHN6 1383 aa28.14■■■□□ 2.09
PREB-201ENST00000260643 UBTFL1P0CB47 393 aaPredicted RBP28.13■■■□□ 2.09
PREB-201ENST00000260643 MYRIPQ8NFW9 859 aa28.13■■■□□ 2.09
PREB-201ENST00000260643 PRIMPOLQ96LW4 560 aa28.13■■■□□ 2.09
PREB-201ENST00000260643 LSG1Q9H089 658 aaKnown RBP28.12■■■□□ 2.09
PREB-201ENST00000260643 LIMCH1Q9UPQ0 1083 aa28.11■■■□□ 2.09
PREB-201ENST00000260643 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.11■■■□□ 2.09
PREB-201ENST00000260643 GNAT3A8MTJ3 354 aa28.11■■■□□ 2.09
PREB-201ENST00000260643 CRYBG1Q9Y4K1 1723 aa28.1■■■□□ 2.09
PREB-201ENST00000260643 ATP6V1DQ9Y5K8 247 aa28.1■■■□□ 2.09
PREB-201ENST00000260643 STX6O43752 255 aa28.1■■■□□ 2.09
PREB-201ENST00000260643 IL1RAPL2Q9NP60 686 aa28.1■■■□□ 2.09
PREB-201ENST00000260643 CNPY2Q9Y2B0 182 aa28.1■■■□□ 2.09
PREB-201ENST00000260643 RHPN1Q8TCX5 695 aa28.09■■■□□ 2.09
PREB-201ENST00000260643 MAP3K5Q99683 1374 aa28.09■■■□□ 2.09
PREB-201ENST00000260643 SYT1P21579 422 aa28.09■■■□□ 2.09
PREB-201ENST00000260643 GTF2F1P35269 517 aaKnown RBP eCLIP28.09■■■□□ 2.09
PREB-201ENST00000260643 FOXD4L6Q3SYB3 417 aaPredicted RBP28.09■■■□□ 2.09
PREB-201ENST00000260643 FOXD4L3Q6VB84 417 aaPredicted RBP28.09■■■□□ 2.09
PREB-201ENST00000260643 SPTLC3Q9NUV7 552 aa28.09■■■□□ 2.09
PREB-201ENST00000260643 USP25Q9UHP3 1055 aa28.09■■■□□ 2.09
PREB-201ENST00000260643 USP42Q9H9J4 1324 aaKnown RBP28.08■■■□□ 2.09
PREB-201ENST00000260643 ADCY5O95622 1261 aa28.08■■■□□ 2.09
PREB-201ENST00000260643 AK2P54819 239 aa28.08■■■□□ 2.09
PREB-201ENST00000260643 HMGN5P82970 282 aaKnown RBP28.08■■■□□ 2.09
PREB-201ENST00000260643 NOLC1Q14978 699 aaKnown RBP eCLIP28.08■■■□□ 2.09
PREB-201ENST00000260643 RUFY3Q7L099 469 aa28.08■■■□□ 2.09
PREB-201ENST00000260643 NUTM1Q86Y26 1132 aa28.08■■■□□ 2.09
PREB-201ENST00000260643 FUCA2Q9BTY2 467 aa28.08■■■□□ 2.09
PREB-201ENST00000260643 F13A1P00488 732 aa28.07■■■□□ 2.08
PREB-201ENST00000260643 KIF1BPQ96EK5 621 aa28.07■■■□□ 2.08
PREB-201ENST00000260643 DIP2BQ9P265 1576 aa28.07■■■□□ 2.08
PREB-201ENST00000260643 PPP1R42Q7Z4L9 355 aa28.07■■■□□ 2.08
PREB-201ENST00000260643 CNTROBQ8N137 903 aa28.07■■■□□ 2.08
PREB-201ENST00000260643 KDM4AO75164 1064 aa28.06■■■□□ 2.08
PREB-201ENST00000260643 TAF7Q15545 349 aaPredicted RBP28.06■■■□□ 2.08
PREB-201ENST00000260643 RASEFQ8IZ41 740 aa28.06■■■□□ 2.08
PREB-201ENST00000260643 UBR1Q8IWV7 1749 aa28.06■■■□□ 2.08
PREB-201ENST00000260643 SURF6O75683 361 aaKnown RBP28.05■■■□□ 2.08
PREB-201ENST00000260643 TNRQ92752 1358 aa28.05■■■□□ 2.08
PREB-201ENST00000260643 SOX12O15370 315 aa28.04■■■□□ 2.08
PREB-201ENST00000260643 AMPHP49418 695 aa28.04■■■□□ 2.08
PREB-201ENST00000260643 IL17REQ8NFR9 667 aa28.04■■■□□ 2.08
PREB-201ENST00000260643 PLEKHG1Q9ULL1 1385 aa28.04■■■□□ 2.08
PREB-201ENST00000260643 NWD1Q149M9 1564 aa28.04■■■□□ 2.08
PREB-201ENST00000260643 HCLS1P14317 486 aaPredicted RBP28.04■■■□□ 2.08
PREB-201ENST00000260643 MLECQ14165 292 aa28.04■■■□□ 2.08
PREB-201ENST00000260643 SMC3Q9UQE7 1217 aa28.04■■■□□ 2.08
PREB-201ENST00000260643 FAM69CQ0P6D2 419 aa28.03■■■□□ 2.08
PREB-201ENST00000260643 TCHHQ07283 1943 aa28.03■■■□□ 2.08
PREB-201ENST00000260643 NECTIN2Q92692 538 aa28.02■■■□□ 2.08
PREB-201ENST00000260643 KCNB2Q92953 911 aa28.02■■■□□ 2.08
PREB-201ENST00000260643 TTC41PQ6P2S7 1318 aa28.02■■■□□ 2.08
PREB-201ENST00000260643 HSP90AB4PQ58FF6 505 aa28.01■■■□□ 2.08
PREB-201ENST00000260643 HYPKQ9NX55 129 aa28.01■■■□□ 2.08
PREB-201ENST00000260643 SMAP1Q8IYB5 467 aaPredicted RBP28.01■■■□□ 2.07
PREB-201ENST00000260643 TM6SF1Q9BZW5 370 aa28.01■■■□□ 2.07
PREB-201ENST00000260643 NUTM2FA1L443 756 aa28■■■□□ 2.07
PREB-201ENST00000260643 DNTTIP2Q5QJE6 756 aaKnown RBP28■■■□□ 2.07
PREB-201ENST00000260643 VPS53Q5VIR6 699 aa28■■■□□ 2.07
PREB-201ENST00000260643 ZSCAN31Q96LW9 406 aaPredicted RBP28■■■□□ 2.07
PREB-201ENST00000260643 MAP4K4O95819 1239 aaPredicted RBP27.99■■■□□ 2.07
PREB-201ENST00000260643 HDGFL1Q5TGJ6 251 aa27.99■■■□□ 2.07
PREB-201ENST00000260643 ZNF830Q96NB3 372 aaPredicted RBP27.99■■■□□ 2.07
PREB-201ENST00000260643 TTC12Q9H892 705 aaPredicted RBP27.99■■■□□ 2.07
PREB-201ENST00000260643 PIK3C2AO00443 1686 aa27.99■■■□□ 2.07
PREB-201ENST00000260643 TPM3P06753 285 aa27.99■■■□□ 2.07
PREB-201ENST00000260643 CCDC94Q9BW85 323 aaPredicted RBP27.99■■■□□ 2.07
PREB-201ENST00000260643 SH2B1Q9NRF2 756 aaPredicted RBP27.99■■■□□ 2.07
PREB-201ENST00000260643 SRGAP3O43295 1099 aa27.98■■■□□ 2.07
PREB-201ENST00000260643 PHAXQ9H814 394 aaKnown RBP27.98■■■□□ 2.07
PREB-201ENST00000260643 MTMR6Q9Y217 621 aa27.98■■■□□ 2.07
PREB-201ENST00000260643 GLRX3O76003 335 aaKnown RBP27.97■■■□□ 2.07
PREB-201ENST00000260643 PDIA4P13667 645 aaKnown RBP27.97■■■□□ 2.07
PREB-201ENST00000260643 RUFY2Q8WXA3 655 aa27.97■■■□□ 2.07
PREB-201ENST00000260643 PRDM4Q9UKN5 801 aa27.97■■■□□ 2.07
PREB-201ENST00000260643 ESF1Q9H501 851 aaKnown RBP27.96■■■□□ 2.07
PREB-201ENST00000260643 FIBPO43427 364 aa27.96■■■□□ 2.07
PREB-201ENST00000260643 HOXB7P09629 217 aa27.96■■■□□ 2.07
PREB-201ENST00000260643 CASTP20810 708 aaKnown RBP27.96■■■□□ 2.07
PREB-201ENST00000260643 ZSWIM6Q9HCJ5 1215 aa27.96■■■□□ 2.07
PREB-201ENST00000260643 CWC27Q6UX04 472 aaKnown RBP27.95■■■□□ 2.06
PREB-201ENST00000260643 LARGE1O95461 756 aa27.94■■■□□ 2.06
PREB-201ENST00000260643 GJB2P29033 226 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms