RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 ERBB3P21860 1342 aa14.47□□□□□ -0.09
CCNA1-201ENST00000255465 CSB-PGBD3P0DP91 1061 aa14.46□□□□□ -0.09
CCNA1-201ENST00000255465 EMILIN1Q9Y6C2 1016 aa14.46□□□□□ -0.09
CCNA1-201ENST00000255465 THSD7AQ9UPZ6 1657 aa14.46□□□□□ -0.09
CCNA1-201ENST00000255465 KIF24Q5T7B8 1368 aa14.46□□□□□ -0.09
CCNA1-201ENST00000255465 ANKRD24Q8TF21 1146 aa14.46□□□□□ -0.1
CCNA1-201ENST00000255465 NPC1L1Q9UHC9 1359 aa14.45□□□□□ -0.1
CCNA1-201ENST00000255465 SYCP1Q15431 976 aa14.45□□□□□ -0.1
CCNA1-201ENST00000255465 SEPT12Q8IYM1 358 aa14.45□□□□□ -0.1
CCNA1-201ENST00000255465 TCP11L2Q8N4U5 519 aa14.45□□□□□ -0.1
CCNA1-201ENST00000255465 POLKQ9UBT6 870 aa14.45□□□□□ -0.1
CCNA1-201ENST00000255465 FLT4P35916 1363 aa14.45□□□□□ -0.1
CCNA1-201ENST00000255465 CLEC17AQ6ZS10 378 aa14.44□□□□□ -0.1
CCNA1-201ENST00000255465 BARGINQ6ZT62 677 aa14.44□□□□□ -0.1
CCNA1-201ENST00000255465 TICAM2Q86XR7 235 aa14.44□□□□□ -0.1
CCNA1-201ENST00000255465 THRAP3Q9Y2W1 955 aaKnown RBP14.44□□□□□ -0.1
CCNA1-201ENST00000255465 A0A0G2JS52 829 aa14.44□□□□□ -0.1
CCNA1-201ENST00000255465 E9PSI1 815 aa14.44□□□□□ -0.1
CCNA1-201ENST00000255465 ZBTB22O15209 634 aa14.44□□□□□ -0.1
CCNA1-201ENST00000255465 DDIT3P35638 169 aa14.44□□□□□ -0.1
CCNA1-201ENST00000255465 KIAA2012Q0VF49 1180 aa14.44□□□□□ -0.1
CCNA1-201ENST00000255465 HSP90AB2PQ58FF8 381 aa14.44□□□□□ -0.1
CCNA1-201ENST00000255465 ANKRD7Q92527 254 aa14.44□□□□□ -0.1
CCNA1-201ENST00000255465 LTV1Q96GA3 475 aaPredicted RBP14.44□□□□□ -0.1
CCNA1-201ENST00000255465 CARD10Q9BWT7 1032 aa14.44□□□□□ -0.1
CCNA1-201ENST00000255465 PARP4Q9UKK3 1724 aaKnown RBP14.43□□□□□ -0.1
CCNA1-201ENST00000255465 BRMS1Q9HCU9 246 aa14.43□□□□□ -0.1
CCNA1-201ENST00000255465 RAD50Q92878 1312 aa14.43□□□□□ -0.1
CCNA1-201ENST00000255465 GOLGA6L22H0YM25 854 aa14.42□□□□□ -0.1
CCNA1-201ENST00000255465 NBPF20Q3BBV1 942 aa14.42□□□□□ -0.1
CCNA1-201ENST00000255465 NLRP2Q9NX02 1062 aa14.42□□□□□ -0.1
CCNA1-201ENST00000255465 SLFN14P0C7P3 912 aa14.42□□□□□ -0.1
CCNA1-201ENST00000255465 KLHL40Q2TBA0 621 aa14.42□□□□□ -0.1
CCNA1-201ENST00000255465 MYCBPQ99417 103 aaPredicted RBP14.42□□□□□ -0.1
CCNA1-201ENST00000255465 MYBBP1AQ9BQG0 1328 aaKnown RBP14.41□□□□□ -0.1
CCNA1-201ENST00000255465 TRIM6-TRIM34B2RNG4 842 aa14.4□□□□□ -0.1
CCNA1-201ENST00000255465 TRIM34Q9BYJ4 488 aa14.4□□□□□ -0.1
CCNA1-201ENST00000255465 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.4□□□□□ -0.1
CCNA1-201ENST00000255465 LRRC37A3O60309 1634 aa14.39□□□□□ -0.11
CCNA1-201ENST00000255465 MYCNP04198 464 aaPredicted RBP14.39□□□□□ -0.11
CCNA1-201ENST00000255465 CAPN2P17655 700 aa14.39□□□□□ -0.11
CCNA1-201ENST00000255465 KRT27Q7Z3Y8 459 aa14.39□□□□□ -0.11
CCNA1-201ENST00000255465 DIAPH3Q9NSV4 1193 aa14.39□□□□□ -0.11
CCNA1-201ENST00000255465 DISP2A7MBM2 1401 aa14.38□□□□□ -0.11
CCNA1-201ENST00000255465 LMOD3Q0VAK6 560 aa14.38□□□□□ -0.11
CCNA1-201ENST00000255465 NCAPGQ9BPX3 1015 aa14.38□□□□□ -0.11
CCNA1-201ENST00000255465 RAB3GAP1Q15042 981 aa14.38□□□□□ -0.11
CCNA1-201ENST00000255465 NBPF6Q5VWK0 638 aa14.38□□□□□ -0.11
CCNA1-201ENST00000255465 SKAP1Q86WV1 359 aa14.38□□□□□ -0.11
CCNA1-201ENST00000255465 SMC5Q8IY18 1101 aa14.38□□□□□ -0.11
CCNA1-201ENST00000255465 NBPF4Q96M43 638 aa14.38□□□□□ -0.11
CCNA1-201ENST00000255465 CDCA7Q9BWT1 371 aaPredicted RBP14.38□□□□□ -0.11
CCNA1-201ENST00000255465 SNX21Q969T3 373 aa14.37□□□□□ -0.11
CCNA1-201ENST00000255465 MTHFSP49914 203 aa14.36□□□□□ -0.11
CCNA1-201ENST00000255465 HSP90AB3PQ58FF7 597 aa14.36□□□□□ -0.11
CCNA1-201ENST00000255465 HSCBQ8IWL3 235 aa14.36□□□□□ -0.11
CCNA1-201ENST00000255465 EP400Q96L91 3159 aa14.36□□□□□ -0.11
CCNA1-201ENST00000255465 HMGB1P09429 215 aaKnown RBP14.35□□□□□ -0.11
CCNA1-201ENST00000255465 IL2RBP14784 551 aa14.35□□□□□ -0.11
CCNA1-201ENST00000255465 BRPF1P55201 1214 aaPredicted RBP14.35□□□□□ -0.11
CCNA1-201ENST00000255465 EIF4A2Q14240 407 aaKnown RBP14.35□□□□□ -0.11
CCNA1-201ENST00000255465 TERF2Q15554 542 aa14.35□□□□□ -0.11
CCNA1-201ENST00000255465 FEZ2Q9UHY8 353 aaPredicted RBP14.35□□□□□ -0.11
CCNA1-201ENST00000255465 MORC2Q9Y6X9 1032 aaPredicted RBP14.35□□□□□ -0.11
CCNA1-201ENST00000255465 PATL2C9JE40 543 aaKnown RBP14.35□□□□□ -0.11
CCNA1-201ENST00000255465 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
CCNA1-201ENST00000255465 DDB1Q16531 1140 aa14.35□□□□□ -0.11
CCNA1-201ENST00000255465 AEBP1Q8IUX7 1158 aa14.35□□□□□ -0.11
CCNA1-201ENST00000255465 USHBP1Q8N6Y0 703 aa14.35□□□□□ -0.11
CCNA1-201ENST00000255465 BCL2L12Q9HB09 334 aa14.35□□□□□ -0.11
CCNA1-201ENST00000255465 CTIFO43310 598 aaKnown RBP14.34□□□□□ -0.11
CCNA1-201ENST00000255465 CLSTN1O94985 981 aa14.34□□□□□ -0.11
CCNA1-201ENST00000255465 FAM182BQ5T319 152 aa14.34□□□□□ -0.11
CCNA1-201ENST00000255465 PIBF1Q8WXW3 757 aa14.34□□□□□ -0.11
CCNA1-201ENST00000255465 SMC4Q9NTJ3 1288 aa14.34□□□□□ -0.11
CCNA1-201ENST00000255465 TNNT3P45378 269 aaPredicted RBP14.33□□□□□ -0.11
CCNA1-201ENST00000255465 NGEFQ8N5V2 710 aa14.33□□□□□ -0.11
CCNA1-201ENST00000255465 UPF1Q92900 1129 aaKnown RBP eCLIP14.33□□□□□ -0.11
CCNA1-201ENST00000255465 TNPO1Q92973 898 aaKnown RBP14.33□□□□□ -0.11
CCNA1-201ENST00000255465 CEP83Q9Y592 693 aa14.33□□□□□ -0.11
CCNA1-201ENST00000255465 KAT6BQ8WYB5 2073 aa14.33□□□□□ -0.12
CCNA1-201ENST00000255465 SBF2Q86WG5 1849 aa14.33□□□□□ -0.12
CCNA1-201ENST00000255465 EXOC5O00471 708 aa14.33□□□□□ -0.12
CCNA1-201ENST00000255465 SATB1Q01826 763 aa14.33□□□□□ -0.12
CCNA1-201ENST00000255465 EGFL6Q8IUX8 553 aa14.33□□□□□ -0.12
CCNA1-201ENST00000255465 BANK1Q8NDB2 785 aa14.33□□□□□ -0.12
CCNA1-201ENST00000255465 EYA1Q99502 592 aa14.33□□□□□ -0.12
CCNA1-201ENST00000255465 SPTLC3Q9NUV7 552 aa14.33□□□□□ -0.12
CCNA1-201ENST00000255465 RGPD1P0DJD0 1748 aa14.32□□□□□ -0.12
CCNA1-201ENST00000255465 NCAPD2Q15021 1401 aa14.32□□□□□ -0.12
CCNA1-201ENST00000255465 DDX41Q9UJV9 622 aaKnown RBP14.32□□□□□ -0.12
CCNA1-201ENST00000255465 SHANK3Q9BYB0 1731 aa14.32□□□□□ -0.12
CCNA1-201ENST00000255465 TNS2Q63HR2 1409 aa14.32□□□□□ -0.12
CCNA1-201ENST00000255465 MEGF6O75095 1541 aa14.32□□□□□ -0.12
CCNA1-201ENST00000255465 KIF1CO43896 1103 aaKnown RBP14.31□□□□□ -0.12
CCNA1-201ENST00000255465 PPP2R1AP30153 589 aa14.31□□□□□ -0.12
CCNA1-201ENST00000255465 GTF2A1P52655 376 aaPredicted RBP14.31□□□□□ -0.12
CCNA1-201ENST00000255465 CHAF1AQ13111 956 aaPredicted RBP14.31□□□□□ -0.12
CCNA1-201ENST00000255465 CERS3Q8IU89 383 aa14.31□□□□□ -0.12
CCNA1-201ENST00000255465 PLCD4Q9BRC7 762 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms