RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 LIMCH1Q9UPQ0 1083 aa13.54□□□□□ -0.24
PCDH12-201ENST00000231484 RIOK3O14730 519 aaKnown RBP13.53□□□□□ -0.24
PCDH12-201ENST00000231484 FMNL3Q8IVF7 1028 aa13.53□□□□□ -0.24
PCDH12-201ENST00000231484 CEP131Q9UPN4 1083 aa13.53□□□□□ -0.24
PCDH12-201ENST00000231484 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
PCDH12-201ENST00000231484 CUX1P39880 1505 aa13.53□□□□□ -0.24
PCDH12-201ENST00000231484 SWAP70Q9UH65 585 aa13.53□□□□□ -0.24
PCDH12-201ENST00000231484 RUSC2Q8N2Y8 1516 aa13.53□□□□□ -0.24
PCDH12-201ENST00000231484 STAMBPO95630 424 aa13.53□□□□□ -0.24
PCDH12-201ENST00000231484 ANO6Q4KMQ2 910 aa13.53□□□□□ -0.24
PCDH12-201ENST00000231484 FKBP15Q5T1M5 1219 aa13.52□□□□□ -0.24
PCDH12-201ENST00000231484 FSIP1Q8NA03 581 aa13.52□□□□□ -0.24
PCDH12-201ENST00000231484 SEPT11Q9NVA2 429 aaKnown RBP13.52□□□□□ -0.24
PCDH12-201ENST00000231484 NEBLO76041 1014 aa13.52□□□□□ -0.25
PCDH12-201ENST00000231484 CCDC50Q8IVM0 306 aa13.52□□□□□ -0.25
PCDH12-201ENST00000231484 FAM76AQ8TAV0 307 aa13.52□□□□□ -0.25
PCDH12-201ENST00000231484 POLA1P09884 1462 aaPredicted RBP13.52□□□□□ -0.25
PCDH12-201ENST00000231484 KIF21BO75037 1637 aa13.52□□□□□ -0.25
PCDH12-201ENST00000231484 B4GALNT4Q76KP1 1039 aa13.52□□□□□ -0.25
PCDH12-201ENST00000231484 CTCFLQ8NI51 663 aaPredicted RBP13.52□□□□□ -0.25
PCDH12-201ENST00000231484 CCDC160A6NGH7 325 aa13.51□□□□□ -0.25
PCDH12-201ENST00000231484 PIP4K2BP78356 416 aa13.51□□□□□ -0.25
PCDH12-201ENST00000231484 RIC3Q7Z5B4 369 aa13.51□□□□□ -0.25
PCDH12-201ENST00000231484 SLC3A2P08195 630 aaKnown RBP13.51□□□□□ -0.25
PCDH12-201ENST00000231484 PTGS1P23219 599 aa13.51□□□□□ -0.25
PCDH12-201ENST00000231484 ATP6V1AP38606 617 aa13.51□□□□□ -0.25
PCDH12-201ENST00000231484 TBC1D9Q6ZT07 1266 aa13.51□□□□□ -0.25
PCDH12-201ENST00000231484 JADE2Q9NQC1 790 aa13.51□□□□□ -0.25
PCDH12-201ENST00000231484 CCDC69A6NI79 296 aa13.51□□□□□ -0.25
PCDH12-201ENST00000231484 INPP5BP32019 993 aa13.51□□□□□ -0.25
PCDH12-201ENST00000231484 BMP2KLQ5H9B9 411 aa13.51□□□□□ -0.25
PCDH12-201ENST00000231484 PIBF1Q8WXW3 757 aa13.5□□□□□ -0.25
PCDH12-201ENST00000231484 TBC1D2BQ9UPU7 963 aa13.5□□□□□ -0.25
PCDH12-201ENST00000231484 TUBBP07437 444 aa13.5□□□□□ -0.25
PCDH12-201ENST00000231484 GJB2P29033 226 aa13.5□□□□□ -0.25
PCDH12-201ENST00000231484 KLHL10Q6JEL2 608 aa13.5□□□□□ -0.25
PCDH12-201ENST00000231484 WASF1Q92558 559 aa13.5□□□□□ -0.25
PCDH12-201ENST00000231484 TAOK3Q9H2K8 898 aa13.5□□□□□ -0.25
PCDH12-201ENST00000231484 CCDC57Q2TAC2 916 aa13.5□□□□□ -0.25
PCDH12-201ENST00000231484 DNAJC21Q5F1R6 531 aaKnown RBP13.5□□□□□ -0.25
PCDH12-201ENST00000231484 USP48Q86UV5 1035 aa13.5□□□□□ -0.25
PCDH12-201ENST00000231484 KLHL34Q8N239 644 aa13.5□□□□□ -0.25
PCDH12-201ENST00000231484 AFAP1L1Q8TED9 768 aa13.5□□□□□ -0.25
PCDH12-201ENST00000231484 STAC3Q96MF2 364 aa13.5□□□□□ -0.25
PCDH12-201ENST00000231484 ARID4AP29374 1257 aaPredicted RBP13.49□□□□□ -0.25
PCDH12-201ENST00000231484 PSME1Q06323 249 aa13.49□□□□□ -0.25
PCDH12-201ENST00000231484 GOLIM4O00461 696 aa13.49□□□□□ -0.25
PCDH12-201ENST00000231484 PHACTR2O75167 634 aa13.49□□□□□ -0.25
PCDH12-201ENST00000231484 SYT10Q6XYQ8 523 aa13.49□□□□□ -0.25
PCDH12-201ENST00000231484 FAM114A1Q8IWE2 563 aa13.49□□□□□ -0.25
PCDH12-201ENST00000231484 SMC5Q8IY18 1101 aa13.49□□□□□ -0.25
PCDH12-201ENST00000231484 ZNF622Q969S3 477 aaKnown RBP eCLIP13.49□□□□□ -0.25
PCDH12-201ENST00000231484 MYOM3Q5VTT5 1437 aa13.49□□□□□ -0.25
PCDH12-201ENST00000231484 ZSCAN22P10073 491 aaPredicted RBP13.49□□□□□ -0.25
PCDH12-201ENST00000231484 MATR3P43243 847 aaKnown RBP eCLIP13.49□□□□□ -0.25
PCDH12-201ENST00000231484 DNA2P51530 1060 aa13.49□□□□□ -0.25
PCDH12-201ENST00000231484 RPAINQ86UA6 219 aa13.49□□□□□ -0.25
PCDH12-201ENST00000231484 LRRC9Q6ZRR7 1453 aa13.49□□□□□ -0.25
PCDH12-201ENST00000231484 CTAGE9A4FU28 777 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 GSTTP1A0A1W2PQM5 241 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
PCDH12-201ENST00000231484 RARSP54136 660 aaKnown RBP13.48□□□□□ -0.25
PCDH12-201ENST00000231484 AP1ARQ63HQ0 302 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 TOP2AP11388 1531 aaKnown RBP13.48□□□□□ -0.25
PCDH12-201ENST00000231484 IGHDP01880 384 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 SLC4A2P04920 1241 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 PRKAR2BP31323 418 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 PRPF40BQ6NWY9 871 aaKnown RBP13.48□□□□□ -0.25
PCDH12-201ENST00000231484 CCDC129Q6ZRS4 1044 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 CACNA2D4Q7Z3S7 1137 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 LMNTD2Q8IXW0 634 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 GGNBP2Q9H3C7 697 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 MKRN1Q9UHC7 482 aaKnown RBP13.48□□□□□ -0.25
PCDH12-201ENST00000231484 UBASH3AP57075 661 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 CNNM3Q8NE01 707 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 SIL1Q9H173 461 aa13.48□□□□□ -0.25
PCDH12-201ENST00000231484 BIN1O00499 593 aa13.47□□□□□ -0.25
PCDH12-201ENST00000231484 PRDM2Q13029 1718 aa13.47□□□□□ -0.25
PCDH12-201ENST00000231484 VGFO15240 615 aaPredicted RBP13.47□□□□□ -0.25
PCDH12-201ENST00000231484 ZEB2O60315 1214 aa13.47□□□□□ -0.25
PCDH12-201ENST00000231484 BUB1BO60566 1050 aaPredicted RBP13.47□□□□□ -0.25
PCDH12-201ENST00000231484 CCDC155Q8N6L0 562 aa13.47□□□□□ -0.25
PCDH12-201ENST00000231484 RBSNQ9H1K0 784 aa13.47□□□□□ -0.25
PCDH12-201ENST00000231484 CNPY2Q9Y2B0 182 aa13.47□□□□□ -0.25
PCDH12-201ENST00000231484 KIF4AO95239 1232 aa13.47□□□□□ -0.25
PCDH12-201ENST00000231484 SSBP05455 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
PCDH12-201ENST00000231484 ZFYP08048 801 aaPredicted RBP13.47□□□□□ -0.25
PCDH12-201ENST00000231484 LACTBP83111 547 aaPredicted RBP13.47□□□□□ -0.25
PCDH12-201ENST00000231484 CFAP57Q96MR6 1250 aa13.47□□□□□ -0.25
PCDH12-201ENST00000231484 SYT1P21579 422 aa13.46□□□□□ -0.25
PCDH12-201ENST00000231484 TFIP11Q9UBB9 837 aaKnown RBP13.46□□□□□ -0.25
PCDH12-201ENST00000231484 ARFGAP2Q8N6H7 521 aa13.46□□□□□ -0.25
PCDH12-201ENST00000231484 EVCP57679 992 aa13.46□□□□□ -0.26
PCDH12-201ENST00000231484 ZSCAN26Q16670 478 aa13.46□□□□□ -0.26
PCDH12-201ENST00000231484 DDX46Q7L014 1031 aaKnown RBP13.46□□□□□ -0.26
PCDH12-201ENST00000231484 BCL2L12Q9HB09 334 aa13.46□□□□□ -0.26
PCDH12-201ENST00000231484 CTNNA3Q9UI47 895 aa13.46□□□□□ -0.26
PCDH12-201ENST00000231484 MRVI1Q9Y6F6 885 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms