RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 ANKRD18BA2A2Z9 1011 aa22.07■■□□□ 1.12
MBD3-201ENST00000156825 ECHDC1Q9NTX5 307 aa22.07■■□□□ 1.12
MBD3-201ENST00000156825 PTPRKQ15262 1439 aa22.07■■□□□ 1.12
MBD3-201ENST00000156825 ZNF213O14771 459 aa22.07■■□□□ 1.12
MBD3-201ENST00000156825 CFAP100Q494V2 611 aa22.06■■□□□ 1.12
MBD3-201ENST00000156825 SEPT11Q9NVA2 429 aaKnown RBP22.06■■□□□ 1.12
MBD3-201ENST00000156825 CRACR2BQ8N4Y2 399 aaPredicted RBP22.06■■□□□ 1.12
MBD3-201ENST00000156825 C8orf76Q96K31 380 aa22.06■■□□□ 1.12
MBD3-201ENST00000156825 CKAP2LQ8IYA6 745 aa22.06■■□□□ 1.12
MBD3-201ENST00000156825 BMP2KQ9NSY1 1161 aaPredicted RBP22.05■■□□□ 1.12
MBD3-201ENST00000156825 TNNQ9UQP3 1299 aa22.05■■□□□ 1.12
MBD3-201ENST00000156825 CDR1P51861 262 aa22.05■■□□□ 1.12
MBD3-201ENST00000156825 CHPF2Q9P2E5 772 aa22.05■■□□□ 1.12
MBD3-201ENST00000156825 PTPRCP08575 1304 aa22.05■■□□□ 1.12
MBD3-201ENST00000156825 PCDHB15Q9Y5E8 787 aa22.05■■□□□ 1.12
MBD3-201ENST00000156825 PAF1Q8N7H5 531 aa22.04■■□□□ 1.12
MBD3-201ENST00000156825 CCDC112Q8NEF3 446 aa22.04■■□□□ 1.12
MBD3-201ENST00000156825 TTC21BQ7Z4L5 1316 aa22.04■■□□□ 1.12
MBD3-201ENST00000156825 GPATCH8Q9UKJ3 1502 aaKnown RBP22.04■■□□□ 1.12
MBD3-201ENST00000156825 CABLES1Q8TDN4 633 aa22.04■■□□□ 1.12
MBD3-201ENST00000156825 AXDND1Q5T1B0 1012 aaPredicted RBP22.04■■□□□ 1.12
MBD3-201ENST00000156825 WASF1Q92558 559 aa22.04■■□□□ 1.12
MBD3-201ENST00000156825 TCEANC2Q96MN5 208 aa22.04■■□□□ 1.12
MBD3-201ENST00000156825 CUL7Q14999 1698 aa22.04■■□□□ 1.12
MBD3-201ENST00000156825 IFIT3O14879 490 aaKnown RBP22.04■■□□□ 1.12
MBD3-201ENST00000156825 GOLGA8BA8MQT2 603 aa22.03■■□□□ 1.12
MBD3-201ENST00000156825 SLC5A1P13866 664 aa22.03■■□□□ 1.12
MBD3-201ENST00000156825 C8orf58Q8NAV2 365 aa22.03■■□□□ 1.12
MBD3-201ENST00000156825 TMOD2Q9NZR1 351 aa22.03■■□□□ 1.12
MBD3-201ENST00000156825 C6orf229H3BNL8 230 aa22.03■■□□□ 1.12
MBD3-201ENST00000156825 LIMCH1Q9UPQ0 1083 aa22.03■■□□□ 1.12
MBD3-201ENST00000156825 TNPO1Q92973 898 aaKnown RBP22.03■■□□□ 1.12
MBD3-201ENST00000156825 ESPNB1AK53 854 aa22.03■■□□□ 1.12
MBD3-201ENST00000156825 DDX46Q7L014 1031 aaKnown RBP22.03■■□□□ 1.12
MBD3-201ENST00000156825 TRMT1LQ7Z2T5 733 aaKnown RBP22.03■■□□□ 1.12
MBD3-201ENST00000156825 KRT24Q2M2I5 525 aa22.02■■□□□ 1.12
MBD3-201ENST00000156825 IQSEC3Q9UPP2 1182 aaPredicted RBP22.02■■□□□ 1.12
MBD3-201ENST00000156825 PANK2Q9BZ23 570 aa22.02■■□□□ 1.12
MBD3-201ENST00000156825 HMGN5P82970 282 aaKnown RBP22.02■■□□□ 1.12
MBD3-201ENST00000156825 SLC12A7Q9Y666 1083 aa22.02■■□□□ 1.12
MBD3-201ENST00000156825 EIF5P55010 431 aaKnown RBP22.02■■□□□ 1.11
MBD3-201ENST00000156825 CCP110O43303 1012 aa22.01■■□□□ 1.11
MBD3-201ENST00000156825 CTCFLQ8NI51 663 aaPredicted RBP22.01■■□□□ 1.11
MBD3-201ENST00000156825 LRRC59Q96AG4 307 aaKnown RBP22.01■■□□□ 1.11
MBD3-201ENST00000156825 CWC25Q9NXE8 425 aaPredicted RBP22.01■■□□□ 1.11
MBD3-201ENST00000156825 ANKRD13DQ6ZTN6 518 aa22.01■■□□□ 1.11
MBD3-201ENST00000156825 KAT6BQ8WYB5 2073 aa22■■□□□ 1.11
MBD3-201ENST00000156825 NCKAP5LQ9HCH0 1330 aa22■■□□□ 1.11
MBD3-201ENST00000156825 CHMP4BP1P59074 171 aa22■■□□□ 1.11
MBD3-201ENST00000156825 ACSBG1Q96GR2 724 aa22■■□□□ 1.11
MBD3-201ENST00000156825 HSP90AB3PQ58FF7 597 aa22■■□□□ 1.11
MBD3-201ENST00000156825 CCDC181Q5TID7 509 aa22■■□□□ 1.11
MBD3-201ENST00000156825 WWC2Q6AWC2 1192 aa22■■□□□ 1.11
MBD3-201ENST00000156825 ZNF444Q8N0Y2 327 aaPredicted RBP22■■□□□ 1.11
MBD3-201ENST00000156825 SEC63Q9UGP8 760 aaKnown RBP22■■□□□ 1.11
MBD3-201ENST00000156825 IQCA1Q86XH1 822 aa21.99■■□□□ 1.11
MBD3-201ENST00000156825 COPS6Q7L5N1 327 aa21.99■■□□□ 1.11
MBD3-201ENST00000156825 MICU3Q86XE3 530 aa21.99■■□□□ 1.11
MBD3-201ENST00000156825 XAGE3Q8WTP9 111 aa21.99■■□□□ 1.11
MBD3-201ENST00000156825 RPGRQ92834 1020 aaKnown RBP21.99■■□□□ 1.11
MBD3-201ENST00000156825 EVI5LQ96CN4 794 aa21.99■■□□□ 1.11
MBD3-201ENST00000156825 CCDC96Q2M329 555 aa21.99■■□□□ 1.11
MBD3-201ENST00000156825 LRRC2Q9BYS8 371 aa21.99■■□□□ 1.11
MBD3-201ENST00000156825 GOLGA8AA7E2F4 631 aa21.99■■□□□ 1.11
MBD3-201ENST00000156825 BIN1O00499 593 aa21.99■■□□□ 1.11
MBD3-201ENST00000156825 CBFA2T2O43439 604 aa21.99■■□□□ 1.11
MBD3-201ENST00000156825 SNRPA1P09661 255 aaKnown RBP21.99■■□□□ 1.11
MBD3-201ENST00000156825 BMP2KLQ5H9B9 411 aa21.98■■□□□ 1.11
MBD3-201ENST00000156825 C16orf71Q8IYS4 520 aaPredicted RBP21.98■■□□□ 1.11
MBD3-201ENST00000156825 KDM5BQ9UGL1 1544 aa21.98■■□□□ 1.11
MBD3-201ENST00000156825 RHPN1Q8TCX5 695 aa21.98■■□□□ 1.11
MBD3-201ENST00000156825 SH2B1Q9NRF2 756 aaPredicted RBP21.98■■□□□ 1.11
MBD3-201ENST00000156825 ERCC4Q92889 916 aaPredicted RBP21.98■■□□□ 1.11
MBD3-201ENST00000156825 VAT1LQ9HCJ6 419 aa21.98■■□□□ 1.11
MBD3-201ENST00000156825 GJB2P29033 226 aa21.97■■□□□ 1.11
MBD3-201ENST00000156825 SCAND2PQ9GZW5 306 aaPredicted RBP21.97■■□□□ 1.11
MBD3-201ENST00000156825 MATR3P43243 847 aaKnown RBP eCLIP21.97■■□□□ 1.11
MBD3-201ENST00000156825 TTC22Q5TAA0 569 aa21.96■■□□□ 1.11
MBD3-201ENST00000156825 PIK3R4Q99570 1358 aa21.96■■□□□ 1.11
MBD3-201ENST00000156825 DCAF8L1A6NGE4 600 aa21.96■■□□□ 1.11
MBD3-201ENST00000156825 EIF4A2Q14240 407 aaKnown RBP21.96■■□□□ 1.11
MBD3-201ENST00000156825 ENOX2Q16206 610 aaKnown RBP21.96■■□□□ 1.11
MBD3-201ENST00000156825 CENPHQ9H3R5 247 aa21.96■■□□□ 1.11
MBD3-201ENST00000156825 USP16Q9Y5T5 823 aa21.96■■□□□ 1.11
MBD3-201ENST00000156825 TNRQ92752 1358 aa21.96■■□□□ 1.11
MBD3-201ENST00000156825 SDSP20132 328 aa21.96■■□□□ 1.11
MBD3-201ENST00000156825 ISM2Q6H9L7 571 aa21.96■■□□□ 1.11
MBD3-201ENST00000156825 CADPS2Q86UW7 1296 aa21.96■■□□□ 1.11
MBD3-201ENST00000156825 NECAB1Q8N987 351 aa21.96■■□□□ 1.11
MBD3-201ENST00000156825 TSPYL6Q8N831 410 aa21.96■■□□□ 1.11
MBD3-201ENST00000156825 UBA5Q9GZZ9 404 aa21.96■■□□□ 1.11
MBD3-201ENST00000156825 MAP3K1Q13233 1512 aa21.95■■□□□ 1.11
MBD3-201ENST00000156825 POLKQ9UBT6 870 aa21.95■■□□□ 1.1
MBD3-201ENST00000156825 CCDC196A0A1B0GTZ2 297 aa21.95■■□□□ 1.1
MBD3-201ENST00000156825 USP25Q9UHP3 1055 aa21.95■■□□□ 1.1
MBD3-201ENST00000156825 NSD2O96028 1365 aa21.95■■□□□ 1.1
MBD3-201ENST00000156825 ANKRD36BQ8N2N9 1353 aa21.95■■□□□ 1.1
MBD3-201ENST00000156825 CEP131Q9UPN4 1083 aa21.95■■□□□ 1.1
MBD3-201ENST00000156825 UQCRHLA0A096LP55 91 aa21.95■■□□□ 1.1
MBD3-201ENST00000156825 SMTNL1A8MU46 457 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 205.6 ms