RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 TAF1LQ8IZX4 1826 aa13.09□□□□□ -0.31
CD9-201ENST00000009180 ELL2O00472 640 aaPredicted RBP13.08□□□□□ -0.32
CD9-201ENST00000009180 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
CD9-201ENST00000009180 AMIGO3Q86WK7 504 aa13.08□□□□□ -0.32
CD9-201ENST00000009180 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.32
CD9-201ENST00000009180 LAMB4A4D0S4 1761 aa13.07□□□□□ -0.32
CD9-201ENST00000009180 GIGYF1O75420 1035 aaPredicted RBP13.07□□□□□ -0.32
CD9-201ENST00000009180 SNRPA1P09661 255 aaKnown RBP13.07□□□□□ -0.32
CD9-201ENST00000009180 CYP19A1P11511 503 aaPredicted RBP13.07□□□□□ -0.32
CD9-201ENST00000009180 PIP4K2AP48426 406 aaPredicted RBP13.07□□□□□ -0.32
CD9-201ENST00000009180 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
CD9-201ENST00000009180 SLFN5Q08AF3 891 aa13.07□□□□□ -0.32
CD9-201ENST00000009180 VSIG10Q8N0Z9 540 aa13.07□□□□□ -0.32
CD9-201ENST00000009180 TSPYL6Q8N831 410 aa13.07□□□□□ -0.32
CD9-201ENST00000009180 NECTIN2Q92692 538 aa13.07□□□□□ -0.32
CD9-201ENST00000009180 USP16Q9Y5T5 823 aa13.07□□□□□ -0.32
CD9-201ENST00000009180 E9PSI1 815 aa13.06□□□□□ -0.32
CD9-201ENST00000009180 CRKLP46109 303 aaKnown RBP13.06□□□□□ -0.32
CD9-201ENST00000009180 DUSP27Q5VZP5 1158 aa13.06□□□□□ -0.32
CD9-201ENST00000009180 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
CD9-201ENST00000009180 MYH16Q9H6N6 1097 aa13.06□□□□□ -0.32
CD9-201ENST00000009180 TUBGCP6Q96RT7 1819 aa13.05□□□□□ -0.32
CD9-201ENST00000009180 A1BGP04217 495 aa13.05□□□□□ -0.32
CD9-201ENST00000009180 EIF2S2P20042 333 aaKnown RBP13.05□□□□□ -0.32
CD9-201ENST00000009180 INTS5Q6P9B9 1019 aaKnown RBP13.05□□□□□ -0.32
CD9-201ENST00000009180 AK7Q96M32 723 aa13.05□□□□□ -0.32
CD9-201ENST00000009180 ZBTB1Q9Y2K1 713 aa13.05□□□□□ -0.32
CD9-201ENST00000009180 CNTNAP4Q9C0A0 1308 aa13.05□□□□□ -0.32
CD9-201ENST00000009180 GNPATO15228 680 aa13.04□□□□□ -0.32
CD9-201ENST00000009180 PHF14O94880 888 aa13.04□□□□□ -0.32
CD9-201ENST00000009180 STARD3NLO95772 234 aa13.04□□□□□ -0.32
CD9-201ENST00000009180 R3HDM1Q15032 1099 aaKnown RBP13.04□□□□□ -0.32
CD9-201ENST00000009180 CCDC87Q9NVE4 849 aa13.04□□□□□ -0.32
CD9-201ENST00000009180 STK32BQ9NY57 414 aa13.04□□□□□ -0.32
CD9-201ENST00000009180 PSDA5PKW4 1024 aaPredicted RBP13.03□□□□□ -0.32
CD9-201ENST00000009180 TCERG1O14776 1098 aaKnown RBP13.03□□□□□ -0.32
CD9-201ENST00000009180 CANXP27824 592 aaKnown RBP13.03□□□□□ -0.32
CD9-201ENST00000009180 SLC15A2Q16348 729 aa13.03□□□□□ -0.32
CD9-201ENST00000009180 TRMT2AQ8IZ69 625 aaKnown RBP13.03□□□□□ -0.32
CD9-201ENST00000009180 TEX13AQ9BXU3 409 aaPredicted RBP13.03□□□□□ -0.32
CD9-201ENST00000009180 MYH14Q7Z406 1995 aaKnown RBP13.03□□□□□ -0.32
CD9-201ENST00000009180 NBPF26B4DH59 902 aa13.02□□□□□ -0.33
CD9-201ENST00000009180 ANXA1P04083 346 aa13.02□□□□□ -0.33
CD9-201ENST00000009180 PROSER3Q2NL68 480 aa13.02□□□□□ -0.33
CD9-201ENST00000009180 TWISTNBQ3B726 338 aaPredicted RBP13.02□□□□□ -0.33
CD9-201ENST00000009180 HDGFL1Q5TGJ6 251 aa13.02□□□□□ -0.33
CD9-201ENST00000009180 NBPF14Q5TI25 921 aa13.02□□□□□ -0.33
CD9-201ENST00000009180 NBPF10Q6P3W6 841 aaKnown RBP13.02□□□□□ -0.33
CD9-201ENST00000009180 NBPF15Q8N660 670 aa13.02□□□□□ -0.33
CD9-201ENST00000009180 PDGFDQ9GZP0 370 aaPredicted RBP13.02□□□□□ -0.33
CD9-201ENST00000009180 TFCP2L1Q9NZI6 479 aa13.02□□□□□ -0.33
CD9-201ENST00000009180 UBR3Q6ZT12 1888 aa13.02□□□□□ -0.33
CD9-201ENST00000009180 HOXB7P09629 217 aa13.01□□□□□ -0.33
CD9-201ENST00000009180 RC3H1Q5TC82 1133 aaKnown RBP13.01□□□□□ -0.33
CD9-201ENST00000009180 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
CD9-201ENST00000009180 SOS1Q07889 1333 aaPredicted RBP13.01□□□□□ -0.33
CD9-201ENST00000009180 PNPLA7Q6ZV29 1317 aa13.01□□□□□ -0.33
CD9-201ENST00000009180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
CD9-201ENST00000009180 RPS6KA4O75676 772 aa13□□□□□ -0.33
CD9-201ENST00000009180 MYL6BP14649 208 aa13□□□□□ -0.33
CD9-201ENST00000009180 CHPF2Q9P2E5 772 aa13□□□□□ -0.33
CD9-201ENST00000009180 COL15A1P39059 1388 aa12.99□□□□□ -0.33
CD9-201ENST00000009180 VAMP4O75379 141 aa12.99□□□□□ -0.33
CD9-201ENST00000009180 PDIA6Q15084 440 aa12.99□□□□□ -0.33
CD9-201ENST00000009180 COL23A1Q86Y22 540 aaPredicted RBP12.99□□□□□ -0.33
CD9-201ENST00000009180 RTCBQ9Y3I0 505 aaKnown RBP12.99□□□□□ -0.33
CD9-201ENST00000009180 C4AP0C0L4 1744 aa12.99□□□□□ -0.33
CD9-201ENST00000009180 EIF5P55010 431 aaKnown RBP12.98□□□□□ -0.33
CD9-201ENST00000009180 QSER1Q2KHR3 1735 aa12.98□□□□□ -0.33
CD9-201ENST00000009180 CASZ1Q86V15 1759 aa12.97□□□□□ -0.33
CD9-201ENST00000009180 SSFA2P28290 1259 aa12.97□□□□□ -0.33
CD9-201ENST00000009180 IL6STP40189 918 aaPredicted RBP12.97□□□□□ -0.33
CD9-201ENST00000009180 LRP10Q7Z4F1 713 aa12.97□□□□□ -0.33
CD9-201ENST00000009180 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
CD9-201ENST00000009180 SRP68Q9UHB9 627 aaKnown RBP12.97□□□□□ -0.33
CD9-201ENST00000009180 ERBB4Q15303 1308 aa12.96□□□□□ -0.33
CD9-201ENST00000009180 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
CD9-201ENST00000009180 CCDC30Q5VVM6 783 aa12.96□□□□□ -0.33
CD9-201ENST00000009180 TTLL7Q6ZT98 887 aa12.96□□□□□ -0.33
CD9-201ENST00000009180 ARXQ96QS3 562 aa12.96□□□□□ -0.33
CD9-201ENST00000009180 DDX21Q9NR30 783 aaKnown RBP eCLIP12.96□□□□□ -0.33
CD9-201ENST00000009180 TBC1D2BQ9UPU7 963 aa12.96□□□□□ -0.33
CD9-201ENST00000009180 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
CD9-201ENST00000009180 AIMP1Q12904 312 aaKnown RBP12.95□□□□□ -0.34
CD9-201ENST00000009180 TRAPPC3LQ5T215 181 aa12.95□□□□□ -0.34
CD9-201ENST00000009180 MSL1Q68DK7 614 aa12.95□□□□□ -0.34
CD9-201ENST00000009180 G2E3Q7L622 706 aa12.95□□□□□ -0.34
CD9-201ENST00000009180 XAGE3Q8WTP9 111 aa12.95□□□□□ -0.34
CD9-201ENST00000009180 BCL2L13Q9BXK5 485 aa12.95□□□□□ -0.34
CD9-201ENST00000009180 PHAXQ9H814 394 aaKnown RBP12.95□□□□□ -0.34
CD9-201ENST00000009180 DBF4Q9UBU7 674 aaPredicted RBP12.95□□□□□ -0.34
CD9-201ENST00000009180 SCN7AQ01118 1682 aa12.95□□□□□ -0.34
CD9-201ENST00000009180 USP42Q9H9J4 1324 aaKnown RBP12.94□□□□□ -0.34
CD9-201ENST00000009180 ZBTB7AO95365 584 aa12.94□□□□□ -0.34
CD9-201ENST00000009180 RFC4P35249 363 aa12.94□□□□□ -0.34
CD9-201ENST00000009180 USPL1Q5W0Q7 1092 aa12.94□□□□□ -0.34
CD9-201ENST00000009180 DZIP3Q86Y13 1208 aaKnown RBP12.94□□□□□ -0.34
CD9-201ENST00000009180 STK31Q9BXU1 1019 aa12.94□□□□□ -0.34
CD9-201ENST00000009180 FOXD4L1Q9NU39 408 aa12.94□□□□□ -0.34
CD9-201ENST00000009180 SRCAPQ6ZRS2 3230 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms