RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Smc2Q8CG48 1191 aaKnown RBP16.34■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Aldh1l2Q8K009 923 aa16.34■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Efcab2Q9CQ46 164 aa16.34■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Ttc21aQ8C0S4 1314 aa16.34■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Slf2Q6P9P0 1278 aa16.34■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Myom2Q14BI5 1463 aa16.34■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Strn4P58404 760 aa16.34■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Mbd5B1AYB6 1498 aa16.33■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 CrklP47941 303 aa16.33■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Kdm3aQ6PCM1 1323 aa16.33■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Zap70P43404 618 aa16.33■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Ell2Q3UKU1 639 aa16.33■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Trim28Q62318 834 aa16.33■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Kri1Q8VDQ9 704 aaKnown RBP16.33■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Trpm2Q91YD4 1506 aa16.33■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Wdr63B2RY71 923 aa16.33■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Fam13aQ8BGI4 693 aa16.33■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Tfip11Q9ERA6 838 aaKnown RBP16.33■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Gabpb2P81069 414 aa16.32■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Med4Q9CQA5 270 aa16.32■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Irgm2A0A140LIF8 407 aa16.32■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 AidaQ8C4Q6 305 aa16.32■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Ginm1Q91WR6 327 aa16.32■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Arhgap23Q69ZH9 1483 aa16.32■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 LifrP42703 1092 aa16.31■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Nol12Q8BG17 217 aa16.31■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Cep57l1Q8VDS7 400 aa16.31■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 FosbP13346 338 aa16.31■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 BccipQ9CWI3 316 aa16.31■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Ccnl1Q52KE7 532 aaKnown RBP16.31■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 EappQ5BU09 281 aa16.31■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Ncbp1Q3UYV9 790 aaKnown RBP16.31■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Trim27Q62158 513 aa16.31■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Polr3gQ6NXY9 223 aa16.31■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Olfml1Q8BSH2 233 aa16.3■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Vps53Q8CCB4 832 aa16.3■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Cep131Q62036 1060 aa16.3■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Dnaaf4Q8R368 420 aa16.3■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Prim1P20664 417 aa16.3■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Atp8b2P98199 1209 aa16.3■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Gse1Q3U3C9 1213 aa16.3■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Nsfl1cQ9CZ44 370 aaKnown RBP16.3■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 TbcaP48428 108 aaKnown RBP16.3■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Cfap69Q8BH53 942 aa16.3■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Slc7a3P70423 618 aa16.29■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Bcar3Q9QZK2 820 aa16.29■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Gm32742A0A1B0GT42 1604 aa16.29■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Myo3aQ8K3H5 1613 aa16.29■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Cdkl5Q3UTQ8 938 aa16.29■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Ppp6r1Q7TSI3 856 aa16.29■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Nip7Q9CXK8 180 aaKnown RBP16.29■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Cavin1O54724 392 aa16.29■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Card10P58660 1021 aa16.29■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Ifit1bl2Q3U687 466 aa16.29■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Gcom1E9PZ54 550 aa16.29■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Grm8P47743 908 aa16.29■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 MyzapQ3UIJ9 466 aa16.29■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Fsd2Q8BZ52 692 aa16.28■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Kdm6aO70546 1401 aa16.28■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Kif3cO35066 796 aa16.28■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Pdia4P08003 638 aaKnown RBP16.28■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Tpm4Q6IRU2 248 aa16.28■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Aldh8a1Q8BH00 487 aa16.28■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Tbc1d9Q3UYK3 1264 aa16.28■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Ncoa4Q5U4H9 625 aa16.28■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 IbspQ61711 324 aa16.28■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Mrvi1Q9WUX5 899 aaKnown RBP16.28■□□□□ 0.2
Pcdha1-202ENSMUST00000193839 Fsd1Q7TPM6 496 aa16.27■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Hnrnpul1Q8VDM6 859 aaKnown RBP16.27■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Spty2d1Q68FG3 682 aa16.26■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Ddb1Q3U1J4 1140 aaKnown RBP16.26■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 CalrP14211 416 aaKnown RBP16.26■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Lmbr1lQ9D1E5 489 aa16.26■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Plekho1Q9JIY0 408 aa16.26■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Cdc45Q9Z1X9 566 aa16.26■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Stk38Q91VJ4 465 aa16.25■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Kiaa0556Q8C753 1610 aa16.25■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Ppm1eQ80TL0 749 aa16.25■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Gjb2Q00977 226 aa16.24■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Tbc1d32Q3URV1 1296 aa16.24■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Pms1Q8K119 917 aa16.24■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Gimap8Q75N62 688 aa16.24■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Mical1Q8VDP3 1048 aa16.24■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Clasp1Q80TV8 1535 aaKnown RBP16.24■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Setbp1Q9Z180 1582 aa16.24■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Speer4dL7N216 212 aa16.24■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Ddx19aQ61655 478 aaKnown RBP16.24■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Tmem266Q8BZB3 538 aa16.24■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 GptQ8QZR5 496 aa16.24■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Smarcc1P97496 1104 aa16.23■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Cyp7a1Q64505 503 aa16.23■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Mcmdc2E9Q956 681 aa16.23■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Morc2aQ69ZX6 1030 aa16.23■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Rbm26Q6NZN0 1012 aaKnown RBP16.23■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Ppp4r3aQ6P2K6 820 aa16.23■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Otud6bQ8K2H2 294 aa16.23■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Nsd3Q6P2L6 1439 aa16.23■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Brd1E9PZ26 1189 aaKnown RBP16.23■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 Rufy2Q8R4C2 606 aa16.23■□□□□ 0.19
Pcdha1-202ENSMUST00000193839 FanclQ9CR14 375 aa16.23■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms