RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Tlr7P58681 1050 aa12.9□□□□□ -0.34
Msh3-202ENSMUST00000185852 TbcaP48428 108 aaKnown RBP12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 Eif4a1P60843 406 aaKnown RBP12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 Nap1l3Q794H2 544 aa12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 Prune1Q8BIW1 454 aa12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 Sf3a1Q8K4Z5 791 aaKnown RBP12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 PhaxQ9JJT9 385 aaKnown RBP12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 Gtf2f1Q3THK3 508 aaKnown RBP12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 Gpatch11Q3UFS4 262 aa12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 Sh3bgrQ9WUZ7 214 aa12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 Pprc1Q6NZN1 1644 aa12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 Samd1D3YXK1 519 aa12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 Gsdma2Q32M21 443 aa12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 Gnat3Q3V3I2 354 aa12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 Krt82Q99M74 516 aa12.89□□□□□ -0.35
Msh3-202ENSMUST00000185852 Adgrb3Q80ZF8 1522 aa12.88□□□□□ -0.35
Msh3-202ENSMUST00000185852 Casp1P29452 402 aa12.88□□□□□ -0.35
Msh3-202ENSMUST00000185852 R3hcc1Q8BSI6 488 aa12.88□□□□□ -0.35
Msh3-202ENSMUST00000185852 Plcd4Q8K3R3 807 aa12.88□□□□□ -0.35
Msh3-202ENSMUST00000185852 Tut1Q8R3F9 869 aa12.88□□□□□ -0.35
Msh3-202ENSMUST00000185852 Cadps2Q8BYR5 1297 aa12.88□□□□□ -0.35
Msh3-202ENSMUST00000185852 Ier5O89113 308 aa12.88□□□□□ -0.35
Msh3-202ENSMUST00000185852 Pram1Q6BCL1 675 aa12.88□□□□□ -0.35
Msh3-202ENSMUST00000185852 NsmfQ99NF2 532 aa12.88□□□□□ -0.35
Msh3-202ENSMUST00000185852 Cdca7Q9D0M2 382 aa12.88□□□□□ -0.35
Msh3-202ENSMUST00000185852 Lamc1P02468 1607 aaKnown RBP12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Cap2Q9CYT6 476 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 ShprhQ7TPQ3 1674 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Syde2E9PUP1 1314 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Wwc1Q5SXA9 1104 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Fsd1Q7TPM6 496 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Tmem67Q8BR76 992 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Polr3dQ91WD1 398 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Pik3r4Q8VD65 1358 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Cul7Q8VE73 1689 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Cct2P80314 535 aaKnown RBP12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Atp8b2P98199 1209 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Gjb2Q00977 226 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Vps54Q5SPW0 977 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Zbtb22Q9Z0G7 638 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Kidins220E9Q9B7 1793 aa12.87□□□□□ -0.35
Msh3-202ENSMUST00000185852 Cfap69Q8BH53 942 aa12.86□□□□□ -0.35
Msh3-202ENSMUST00000185852 Vps53Q8CCB4 832 aa12.86□□□□□ -0.35
Msh3-202ENSMUST00000185852 Utp3Q9JI13 469 aaKnown RBP12.86□□□□□ -0.35
Msh3-202ENSMUST00000185852 Brd1E9PZ26 1189 aaKnown RBP12.86□□□□□ -0.35
Msh3-202ENSMUST00000185852 Cnnm3Q32NY4 713 aa12.86□□□□□ -0.35
Msh3-202ENSMUST00000185852 Ints3Q7TPD0 1041 aaKnown RBP12.86□□□□□ -0.35
Msh3-202ENSMUST00000185852 Larp6Q8BN59 492 aa12.86□□□□□ -0.35
Msh3-202ENSMUST00000185852 Lmbrd2Q8C561 694 aa12.86□□□□□ -0.35
Msh3-202ENSMUST00000185852 EvcP57680 1005 aa12.86□□□□□ -0.35
Msh3-202ENSMUST00000185852 Zc3h12cQ5DTV4 884 aa12.86□□□□□ -0.35
Msh3-202ENSMUST00000185852 4930504O13RikQ8C5Z9 145 aa12.86□□□□□ -0.35
Msh3-202ENSMUST00000185852 Plch2A2AP18 1501 aa12.86□□□□□ -0.35
Msh3-202ENSMUST00000185852 AampJ3QN89 436 aa12.85□□□□□ -0.35
Msh3-202ENSMUST00000185852 Cplx2P84086 134 aa12.85□□□□□ -0.35
Msh3-202ENSMUST00000185852 Tpx2A2APB8 745 aaKnown RBP12.85□□□□□ -0.35
Msh3-202ENSMUST00000185852 Tpd52l1O54818 204 aa12.85□□□□□ -0.35
Msh3-202ENSMUST00000185852 Cct4P80315 539 aaKnown RBP12.85□□□□□ -0.35
Msh3-202ENSMUST00000185852 Pde4dQ01063 747 aa12.85□□□□□ -0.35
Msh3-202ENSMUST00000185852 1700010I14RikQ7TPG0 532 aa12.85□□□□□ -0.35
Msh3-202ENSMUST00000185852 MycnP03966 462 aaKnown RBP12.85□□□□□ -0.35
Msh3-202ENSMUST00000185852 EspnlQ3UYR4 1005 aa12.85□□□□□ -0.35
Msh3-202ENSMUST00000185852 Adora1Q60612 326 aa12.85□□□□□ -0.35
Msh3-202ENSMUST00000185852 Fnbp4Q6ZQ03 1031 aa12.85□□□□□ -0.35
Msh3-202ENSMUST00000185852 Slc14a2Q8R4T9 930 aa12.84□□□□□ -0.35
Msh3-202ENSMUST00000185852 Ssh1Q76I79 1042 aa12.84□□□□□ -0.35
Msh3-202ENSMUST00000185852 Tns3Q5SSZ5 1440 aa12.84□□□□□ -0.35
Msh3-202ENSMUST00000185852 Ahdc1Q6PAL7 1594 aaKnown RBP12.84□□□□□ -0.35
Msh3-202ENSMUST00000185852 Pdia3P27773 505 aaKnown RBP12.84□□□□□ -0.35
Msh3-202ENSMUST00000185852 Phlpp2Q8BXA7 1320 aa12.83□□□□□ -0.35
Msh3-202ENSMUST00000185852 Rbbp8nlA2ABX0 614 aa12.83□□□□□ -0.35
Msh3-202ENSMUST00000185852 Kifc2O08672 792 aa12.83□□□□□ -0.35
Msh3-202ENSMUST00000185852 IntuQ059U7 942 aa12.83□□□□□ -0.35
Msh3-202ENSMUST00000185852 Med14A2ABV5 1459 aaKnown RBP12.83□□□□□ -0.36
Msh3-202ENSMUST00000185852 Pms1Q8K119 917 aa12.83□□□□□ -0.36
Msh3-202ENSMUST00000185852 Tmem143Q8VD26 458 aa12.83□□□□□ -0.36
Msh3-202ENSMUST00000185852 PtmsQ9D0J8 101 aaKnown RBP12.83□□□□□ -0.36
Msh3-202ENSMUST00000185852 Fam84aQ9D650 292 aa12.83□□□□□ -0.36
Msh3-202ENSMUST00000185852 Mdm2P23804 489 aa12.83□□□□□ -0.36
Msh3-202ENSMUST00000185852 Tgfb1i1Q62219 461 aa12.83□□□□□ -0.36
Msh3-202ENSMUST00000185852 Cyp2d12Q8BVD2 504 aa12.83□□□□□ -0.36
Msh3-202ENSMUST00000185852 Prex1Q69ZK0 1650 aa12.83□□□□□ -0.36
Msh3-202ENSMUST00000185852 Atg4a-psA0A0G2JFS9 396 aa12.82□□□□□ -0.36
Msh3-202ENSMUST00000185852 Atg4aQ8C9S8 396 aa12.82□□□□□ -0.36
Msh3-202ENSMUST00000185852 Rai14Q9EP71 979 aaKnown RBP12.82□□□□□ -0.36
Msh3-202ENSMUST00000185852 IncenpQ9WU62 880 aa12.82□□□□□ -0.36
Msh3-202ENSMUST00000185852 Mcmdc2E9Q956 681 aa12.82□□□□□ -0.36
Msh3-202ENSMUST00000185852 Gm21969J3QJZ1 289 aa12.82□□□□□ -0.36
Msh3-202ENSMUST00000185852 Znf697Q569E7 569 aa12.82□□□□□ -0.36
Msh3-202ENSMUST00000185852 AidaQ8C4Q6 305 aa12.82□□□□□ -0.36
Msh3-202ENSMUST00000185852 Znf704Q9ERQ3 566 aa12.82□□□□□ -0.36
Msh3-202ENSMUST00000185852 Arhgap23Q69ZH9 1483 aa12.82□□□□□ -0.36
Msh3-202ENSMUST00000185852 Ncoa4Q5U4H9 625 aa12.82□□□□□ -0.36
Msh3-202ENSMUST00000185852 Nup133Q8R0G9 1155 aa12.82□□□□□ -0.36
Msh3-202ENSMUST00000185852 Psma5Q9Z2U1 241 aaKnown RBP12.82□□□□□ -0.36
Msh3-202ENSMUST00000185852 Fam213aQ9CYH2 218 aa12.81□□□□□ -0.36
Msh3-202ENSMUST00000185852 Slx4ipQ9D7Y9 413 aa12.81□□□□□ -0.36
Msh3-202ENSMUST00000185852 Setbp1Q9Z180 1582 aa12.81□□□□□ -0.36
Msh3-202ENSMUST00000185852 Disp3A3KFU9 1347 aa12.81□□□□□ -0.36
Msh3-202ENSMUST00000185852 Sik1Q60670 779 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms