RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 SympkQ80X82 1284 aa34.07■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Tlr7P58681 1050 aa34.06■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Irf9Q61179 399 aa34.06■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Ssh1Q76I79 1042 aa34.06■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Ddx17Q501J6 650 aaKnown RBP34.05■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Mum1Q6DID5 682 aa34.05■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Bcl2l13P59017 434 aa34.04■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Zranb3Q6NZP1 1069 aa34.04■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Ddit3P35639 168 aa34.02■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Slc4a10Q5DTL9 1118 aa34.02■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Iqsec3Q3TES0 1195 aa34.02■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Tpx2A2APB8 745 aaKnown RBP34.01■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Prune1Q8BIW1 454 aa34.01■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Cyp27a1Q9DBG1 533 aa34■■■■□ 3.03
Ldb1-208ENSMUST00000185355 MccE9PWI3 1003 aa33.99■■■■□ 3.03
Ldb1-208ENSMUST00000185355 Tjp1P39447 1745 aaKnown RBP33.99■■■■□ 3.03
Ldb1-208ENSMUST00000185355 Zkscan16A2ALW2 728 aa33.99■■■■□ 3.03
Ldb1-208ENSMUST00000185355 Hsp90b1P08113 802 aaKnown RBP33.99■■■■□ 3.03
Ldb1-208ENSMUST00000185355 4930572O03RikQ8C5Y0 211 aa33.99■■■■□ 3.03
Ldb1-208ENSMUST00000185355 Ddx60E9PZQ1 1711 aa33.98■■■■□ 3.03
Ldb1-208ENSMUST00000185355 Pdia6Q922R8 440 aaKnown RBP33.98■■■■□ 3.03
Ldb1-208ENSMUST00000185355 CalcaP70160 136 aa33.97■■■■□ 3.03
Ldb1-208ENSMUST00000185355 Map3k13Q1HKZ5 959 aa33.97■■■■□ 3.03
Ldb1-208ENSMUST00000185355 TefQ9JLC6 301 aa33.97■■■■□ 3.03
Ldb1-208ENSMUST00000185355 Mcm4P49717 862 aa33.96■■■■□ 3.03
Ldb1-208ENSMUST00000185355 Ssfa2Q922B9 1252 aa33.96■■■■□ 3.03
Ldb1-208ENSMUST00000185355 Anapc15P60007 132 aa33.95■■■■□ 3.03
Ldb1-208ENSMUST00000185355 DiexfQ8BTT6 772 aaKnown RBP33.95■■■■□ 3.03
Ldb1-208ENSMUST00000185355 Plcb2A3KGF7 1181 aa33.95■■■■□ 3.03
Ldb1-208ENSMUST00000185355 Zfp142G5E869 1843 aa33.95■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Abcc4E9Q236 1325 aa33.94■■■■□ 3.02
Ldb1-208ENSMUST00000185355 4933402E13RikQ9D4D2 429 aa33.94■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Zkscan1Q8BGS3 561 aaKnown RBP33.94■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Tgfb1i1Q62219 461 aa33.93■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Shank2Q80Z38 1476 aa33.93■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Ltbp4Q8K4G1 1666 aa33.93■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Plekhd1B2RPU2 505 aa33.92■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Amigo3Q8C2S7 508 aa33.92■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Grm8P47743 908 aa33.92■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Unc5clQ6R653 518 aa33.92■■■■□ 3.02
Ldb1-208ENSMUST00000185355 LlphQ9D945 130 aaKnown RBP33.92■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Irx3P81067 507 aa33.91■■■■□ 3.02
Ldb1-208ENSMUST00000185355 VgfQ0VGU4 617 aa33.91■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Asic4Q7TNS7 539 aa33.91■■■■□ 3.02
Ldb1-208ENSMUST00000185355 AnlnQ8K298 1121 aaKnown RBP33.91■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Bicc1Q99MQ1 977 aaKnown RBP33.91■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Fam50bQ9WTJ8 334 aa33.91■■■■□ 3.02
Ldb1-208ENSMUST00000185355 RgmbQ7TQ33 436 aa33.91■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Eif3bQ8JZQ9 803 aaKnown RBP33.91■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Stk11ipQ3TAA7 1072 aa33.89■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Ppm1mQ8BU27 406 aa33.89■■■■□ 3.02
Ldb1-208ENSMUST00000185355 Kiaa0232Q80U59 1396 aaKnown RBP33.87■■■■□ 3.01
Ldb1-208ENSMUST00000185355 Cnnm1Q0GA42 951 aa33.87■■■■□ 3.01
Ldb1-208ENSMUST00000185355 Dmrtc1Q9D9R7 182 aa33.87■■■■□ 3.01
Ldb1-208ENSMUST00000185355 Cadps2Q8BYR5 1297 aa33.86■■■■□ 3.01
Ldb1-208ENSMUST00000185355 PtmsQ9D0J8 101 aaKnown RBP33.86■■■■□ 3.01
Ldb1-208ENSMUST00000185355 Pde3bQ61409 1100 aa33.84■■■■□ 3.01
Ldb1-208ENSMUST00000185355 Lmbr1lQ9D1E5 489 aa33.83■■■■□ 3.01
Ldb1-208ENSMUST00000185355 Brwd3A2AHJ4 1799 aa33.83■■■■□ 3.01
Ldb1-208ENSMUST00000185355 Zbtb3Q91X45 518 aa33.82■■■■□ 3
Ldb1-208ENSMUST00000185355 Pmfbp1Q9WVQ0 1022 aa33.82■■■■□ 3
Ldb1-208ENSMUST00000185355 Vwa3bJ9JI28 736 aa33.81■■■■□ 3
Ldb1-208ENSMUST00000185355 HdgfP51859 237 aaKnown RBP33.81■■■■□ 3
Ldb1-208ENSMUST00000185355 ZgpatQ8VDM1 511 aa33.81■■■■□ 3
Ldb1-208ENSMUST00000185355 Bloc1s4Q8VED2 215 aa33.81■■■■□ 3
Ldb1-208ENSMUST00000185355 Spryd3E9Q9B3 442 aa33.8■■■■□ 3
Ldb1-208ENSMUST00000185355 Zpr1Q62384 459 aa33.8■■■■□ 3
Ldb1-208ENSMUST00000185355 Prkab2Q6PAM0 271 aa33.8■■■■□ 3
Ldb1-208ENSMUST00000185355 Pip4k2bQ80XI4 416 aa33.8■■■■□ 3
Ldb1-208ENSMUST00000185355 Bag4Q8CI61 457 aa33.8■■■■□ 3
Ldb1-208ENSMUST00000185355 Smarce1O54941 411 aaKnown RBP33.8■■■■□ 3
Ldb1-208ENSMUST00000185355 Igfbp6P47880 238 aa33.8■■■■□ 3
Ldb1-208ENSMUST00000185355 Pa2g4P50580 394 aaKnown RBP33.8■■■■□ 3
Ldb1-208ENSMUST00000185355 NexnQ7TPW1 607 aa33.8■■■■□ 3
Ldb1-208ENSMUST00000185355 Rad50P70388 1312 aa33.79■■■■□ 3
Ldb1-208ENSMUST00000185355 Atp6v1dP57746 247 aa33.79■■■■□ 3
Ldb1-208ENSMUST00000185355 Ms4a2P20490 235 aa33.78■■■■□ 3
Ldb1-208ENSMUST00000185355 Isy1Q69ZQ2 285 aaKnown RBP33.78■■■■□ 3
Ldb1-208ENSMUST00000185355 Slc5a1Q8C3K6 665 aa33.78■■■■□ 3
Ldb1-208ENSMUST00000185355 Brf1Q8CFK2 676 aa33.78■■■■□ 3
Ldb1-208ENSMUST00000185355 Fam228bQ497Q6 232 aa33.77■■■■□ 3
Ldb1-208ENSMUST00000185355 Taf5lQ91WQ5 589 aa33.77■■■■□ 3
Ldb1-208ENSMUST00000185355 Speer4bQ9D9F7 267 aa33.77■■■■□ 3
Ldb1-208ENSMUST00000185355 Gm21663A0A0G2JE01 267 aa33.76■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Brpf1B2RRD7 1212 aa33.76■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Gm7361D3Z6R1 267 aa33.76■■■□□ 2.99
Ldb1-208ENSMUST00000185355 5031410I06RikE9Q4E0 267 aa33.76■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Gm1979E9QAN3 267 aa33.76■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Gm5862K7N5V5 267 aa33.76■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Gm10220K7N660 267 aa33.76■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Brinp3Q499E0 766 aa33.76■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Jakmip1Q8BVL9 626 aa33.76■■■□□ 2.99
Ldb1-208ENSMUST00000185355 PigbQ9JJQ0 542 aa33.76■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Tiam2Q6ZPF3 1715 aa33.75■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Ttll7A4Q9F0 912 aa33.75■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Efcab2Q9CQ46 164 aa33.75■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Stk3Q9JI10 497 aa33.75■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Filip1lQ6P6L0 1131 aa33.75■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Ankle2Q6P1H6 964 aa33.74■■■□□ 2.99
Ldb1-208ENSMUST00000185355 Flad1Q8R123 492 aa33.74■■■□□ 2.99
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms