RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Terf2O35144 541 aa16.55■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Il4rP16382 810 aa16.55■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Cnnm1Q0GA42 951 aa16.55■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Cwc27Q3TKY6 469 aa16.55■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Map3k2Q61083 619 aa16.55■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Bend3Q6PAL0 825 aa16.55■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Atg4aQ8C9S8 396 aa16.55■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Bcl11bQ99PV8 884 aa16.55■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Hspa2P17156 633 aa16.54■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Tlr7P58681 1050 aa16.54■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Aldh8a1Q8BH00 487 aa16.54■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Mcm4P49717 862 aa16.54■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Slc39a6Q8C145 765 aa16.54■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Eif3bQ8JZQ9 803 aaKnown RBP16.54■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Tmem119Q8R138 280 aa16.54■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Cfdp1O88271 295 aaKnown RBP16.53■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Stk11ipQ3TAA7 1072 aa16.53■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Iqsec3Q3TES0 1195 aa16.53■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Slx1bQ8BX32 270 aa16.53■□□□□ 0.24
Rnf4-204ENSMUST00000182047 BcorQ8CGN4 1759 aa16.52■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Ttll7A4Q9F0 912 aa16.52■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Dmrtc1Q9D9R7 182 aa16.52■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Nek4Q9Z1J2 792 aa16.52■□□□□ 0.24
Rnf4-204ENSMUST00000182047 Tfip11Q9ERA6 838 aaKnown RBP16.52■□□□□ 0.23
Rnf4-204ENSMUST00000182047 SlkO54988 1233 aa16.51■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Atp8b2P98199 1209 aa16.51■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Pdcl3Q8BVF2 240 aa16.51■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Ssfa2Q922B9 1252 aa16.51■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Stk36Q69ZM6 1316 aa16.51■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Pknox2Q8BG99 474 aa16.51■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Ints5Q8CHT3 1018 aa16.51■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Efcab2Q9CQ46 164 aa16.51■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Nphp1Q9QY53 687 aa16.51■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Flt4P35917 1363 aa16.5■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Tbc1d9Q3UYK3 1264 aa16.5■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Irf9Q61179 399 aa16.5■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Cgnl1Q6AW69 1298 aa16.5■□□□□ 0.23
Rnf4-204ENSMUST00000182047 TefQ9JLC6 301 aa16.5■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Gcc1Q9D4H2 778 aa16.5■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Ubr2Q6WKZ8 1755 aa16.5■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Pard3Q99NH2 1333 aa16.5■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Mmp8O70138 465 aa16.49■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Znf526Q8BI66 675 aa16.49■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Paxip1Q6NZQ4 1056 aa16.49■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Bicc1Q99MQ1 977 aaKnown RBP16.49■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Bcar3Q9QZK2 820 aa16.48■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Ier5O89113 308 aa16.47■□□□□ 0.23
Rnf4-204ENSMUST00000182047 CalcaP70160 136 aa16.47■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Slc4a10Q5DTL9 1118 aa16.47■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Cyp46a1Q9WVK8 500 aa16.47■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Tgfb1i1Q62219 461 aa16.46■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Clcn1Q64347 994 aa16.46■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Atg3Q9CPX6 314 aa16.46■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Bcl2l12Q9D3J3 255 aa16.46■□□□□ 0.23
Rnf4-204ENSMUST00000182047 Ybx3Q9JKB3 361 aaKnown RBP16.46■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Col4a1P02463 1669 aa16.45■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Akap11E9Q777 1895 aa16.45■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Rtn4Q99P72 1162 aaKnown RBP16.45■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Lmbr1lQ9D1E5 489 aa16.44■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Qtrt2B8ZXI1 415 aa16.43■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Mcmdc2E9Q956 681 aa16.43■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Mcm2P97310 904 aa16.43■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Ppm1mQ8BU27 406 aa16.43■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Phf14Q9D4H9 881 aa16.43■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Pa2g4P50580 394 aaKnown RBP16.42■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Tjp1P39447 1745 aaKnown RBP16.42■□□□□ 0.22
Rnf4-204ENSMUST00000182047 AceP09470 1312 aa16.42■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Ccnl1Q52KE7 532 aaKnown RBP16.42■□□□□ 0.22
Rnf4-204ENSMUST00000182047 CenppQ9CZ92 286 aa16.42■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Jarid2Q62315 1234 aa16.41■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Grm8P47743 908 aa16.41■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Taok2Q6ZQ29 1240 aa16.41■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Gtf2a1Q99PM3 378 aa16.41■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Ddit3P35639 168 aa16.4■□□□□ 0.22
Rnf4-204ENSMUST00000182047 HellsQ60848 821 aa16.4■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Prune1Q8BIW1 454 aa16.4■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Cap2Q9CYT6 476 aa16.4■□□□□ 0.22
Rnf4-204ENSMUST00000182047 ScaperF8VQ70 1398 aaKnown RBP16.4■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Marf1Q8BJ34 1730 aaKnown RBP16.4■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Hmox1P14901 289 aa16.4■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Pdia3P27773 505 aaKnown RBP16.4■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Ptpdc1Q6NZK8 747 aa16.4■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Flad1Q8R123 492 aa16.4■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Q9D2X8 372 aa16.4■□□□□ 0.22
Rnf4-204ENSMUST00000182047 Rsph3aQ3UFY4 516 aa16.39■□□□□ 0.21
Rnf4-204ENSMUST00000182047 ApobrQ8VBT6 942 aa16.39■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Ppp6r3Q922D4 844 aa16.39■□□□□ 0.21
Rnf4-204ENSMUST00000182047 MypnQ5DTJ9 1315 aa16.39■□□□□ 0.21
Rnf4-204ENSMUST00000182047 NmiO35309 314 aa16.39■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Lrrc59Q922Q8 307 aaKnown RBP16.39■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Tceal9Q9DD24 104 aa16.39■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Trim44Q9QXA7 346 aa16.39■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Tpx2A2APB8 745 aaKnown RBP16.37■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Syde2E9PUP1 1314 aa16.37■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Elp1Q7TT37 1333 aaKnown RBP16.37■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Tiam2Q6ZPF3 1715 aa16.37■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Tom1O88746 492 aa16.37■□□□□ 0.21
Rnf4-204ENSMUST00000182047 RestQ8VIG1 1082 aa16.37■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Gm10093D3YYI8 482 aa16.36■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Hdac1O09106 482 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms