RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Phactr2B1AVP0 632 aa19.01■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Mum1Q6DID5 682 aa19.01■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Cfdp1O88271 295 aaKnown RBP19■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Ms4a2P20490 235 aa19■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Mphosph10Q810V0 681 aaKnown RBP19■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Tmem119Q8R138 280 aa19■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Simc1E9Q6E9 1354 aa18.99■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Gm45015A0A140LII9 184 aa18.99■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Gm18336A0A140LIU8 765 aa18.99■□□□□ 0.63
Sdc1-205ENSMUST00000171158 EvcP57680 1005 aa18.99■□□□□ 0.63
Sdc1-205ENSMUST00000171158 PsapQ61207 557 aaKnown RBP18.99■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Filip1lQ6P6L0 1131 aa18.99■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Jakmip1Q8BVL9 626 aa18.99■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Atp6v1dP57746 247 aa18.98■□□□□ 0.63
Sdc1-205ENSMUST00000171158 GckrQ91X44 587 aa18.98■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Ccdc7Q9D541 371 aa18.98■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Rad50P70388 1312 aa18.98■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Wnk3Q80XP9 1757 aa18.97■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Vsig10D3YX43 558 aa18.97■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Smarce1O54941 411 aaKnown RBP18.97■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Map3k13Q1HKZ5 959 aa18.97■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Map3k2Q61083 619 aa18.97■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Tgfb1i1Q62219 461 aa18.97■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Tceal9Q9DD24 104 aa18.97■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Col15a1O35206 1367 aa18.97■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Bcl2l13P59017 434 aa18.96■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Pdzrn3Q69ZS0 1063 aa18.96■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Utp18Q5SSI6 552 aaKnown RBP18.96■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Nol11Q8BJW5 723 aaKnown RBP18.96■□□□□ 0.63
Sdc1-205ENSMUST00000171158 KinQ8K339 391 aa18.96■□□□□ 0.63
Sdc1-205ENSMUST00000171158 Abcc4E9Q236 1325 aa18.95■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Eif3aP23116 1344 aaKnown RBP18.95■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Dzip1Q8BMD2 852 aa18.95■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Pdcl3Q8BVF2 240 aa18.95■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Chmp4cQ9D7F7 232 aa18.95■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Mlh1Q9JK91 760 aa18.95■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Nrxn3Q6P9K9 1571 aa18.95■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Brpf1B2RRD7 1212 aa18.95■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Gm10471E9Q1C7 252 aa18.94■□□□□ 0.62
Sdc1-205ENSMUST00000171158 St18Q80TY4 1045 aa18.94■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Stk3Q9JI10 497 aa18.94■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Gm9992B2RWK3 458 aa18.94■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Irf9Q61179 399 aa18.94■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Unc93aQ710D3 458 aa18.94■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Strn4P58404 760 aa18.93■□□□□ 0.62
Sdc1-205ENSMUST00000171158 HellsQ60848 821 aa18.93■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Ddx19aQ61655 478 aaKnown RBP18.92■□□□□ 0.62
Sdc1-205ENSMUST00000171158 SympkQ80X82 1284 aa18.92■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Brf1Q8CFK2 676 aa18.92■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Slx4ipQ9D7Y9 413 aa18.92■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Pa2g4P50580 394 aaKnown RBP18.92■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Ints3Q7TPD0 1041 aaKnown RBP18.92■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Ccdc155Q80VJ8 648 aa18.92■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Pdzd9Q9D9M4 266 aa18.92■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Kcnn1Q9EQR3 537 aa18.92■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Taf7Q9R1C0 341 aa18.92■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Fam228bQ497Q6 232 aa18.91■□□□□ 0.62
Sdc1-205ENSMUST00000171158 4931400O07RikQ9D4M5 137 aa18.91■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Trim44Q9QXA7 346 aa18.91■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Kiaa0232Q80U59 1396 aaKnown RBP18.91■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Elmsan1E9Q2I4 1089 aaKnown RBP18.91■□□□□ 0.62
Sdc1-205ENSMUST00000171158 PogkQ80TC5 607 aa18.91■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Slain2Q8CI08 581 aa18.91■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Ddx60E9PZQ1 1711 aa18.9■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Phlpp1Q8CHE4 1687 aa18.9■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Tnks1bp1P58871 1720 aa18.9■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Gadd45bP22339 160 aa18.9■□□□□ 0.62
Sdc1-205ENSMUST00000171158 EspnlQ3UYR4 1005 aa18.9■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Paxip1Q6NZQ4 1056 aa18.9■□□□□ 0.62
Sdc1-205ENSMUST00000171158 TkfcQ8VC30 578 aa18.9■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Taf5lQ91WQ5 589 aa18.9■□□□□ 0.62
Sdc1-205ENSMUST00000171158 Tjp1P39447 1745 aaKnown RBP18.89■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Kcna6Q61923 529 aa18.89■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Zbtb3Q91X45 518 aa18.89■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Pdia6Q922R8 440 aaKnown RBP18.89■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Bicc1Q99MQ1 977 aaKnown RBP18.89■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Grm8P47743 908 aa18.89■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Farp2Q91VS8 1065 aa18.89■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Add2Q9QYB8 725 aa18.89■□□□□ 0.61
Sdc1-205ENSMUST00000171158 OptnQ8K3K8 584 aa18.88■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Gtf2a1Q99PM3 378 aa18.88■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Tns2Q8CGB6 1400 aa18.88■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Ppfia1B2RXQ2 1266 aa18.88■□□□□ 0.61
Sdc1-205ENSMUST00000171158 PtmaP26350 111 aa18.88■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Gjb2Q00977 226 aa18.88■□□□□ 0.61
Sdc1-205ENSMUST00000171158 VgfQ0VGU4 617 aa18.88■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Cpa2Q504N0 417 aa18.88■□□□□ 0.61
Sdc1-205ENSMUST00000171158 ThemisQ8BGW0 636 aa18.88■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Ubr2Q6WKZ8 1755 aa18.87■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Top1mtQ8R4U6 593 aa18.87■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Igfbp6P47880 238 aa18.86■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Glipr1l2Q9CQ35 332 aa18.86■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Phkg2Q9DB30 406 aa18.86■□□□□ 0.61
Sdc1-205ENSMUST00000171158 CrklP47941 303 aa18.85■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Iqsec3Q3TES0 1195 aa18.85■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Ppm1mQ8BU27 406 aa18.85■□□□□ 0.61
Sdc1-205ENSMUST00000171158 FocadA2AKG8 1798 aa18.85■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Evi5lH3BKQ3 813 aa18.85■□□□□ 0.61
Sdc1-205ENSMUST00000171158 GnpatP98192 678 aa18.85■□□□□ 0.61
Sdc1-205ENSMUST00000171158 Dixdc1Q80Y83 711 aa18.85■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 122.7 ms