RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Ano10Q8BH79 659 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ccdc12Q8R344 166 aaKnown RBP7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Akap8Q9DBR0 687 aaKnown RBP7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Gm3409A0A0G2JE67 319 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Bach2P97303 839 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Dzip1Q8BMD2 852 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ppp4r3bQ922R5 820 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Npdc1Q64322 332 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 RalylQ8BTF8 293 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Nop2Q922K7 793 aaKnown RBP7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Kdm2bQ6P1G2 1309 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Strn4P58404 760 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Limch1Q3UH68 1057 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Cfap53Q9D439 514 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Dync1i2O88487 612 aaKnown RBP7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ptpdc1Q6NZK8 747 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 RpainQ9CWY9 219 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Stx1aO35526 288 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ebag9Q9D0V7 213 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 March6Q6ZQ89 909 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Sv2bQ8BG39 683 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Rlbp1Q9Z275 317 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Mmp14P53690 582 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Psmd7P26516 321 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Slc13a4Q8BZ82 625 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Wdr60Q8C761 999 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 EvcP57680 1005 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ccdc110Q3V125 848 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Zpr1Q62384 459 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Smarcc2Q6PDG5 1213 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 MlecQ6ZQI3 291 aaKnown RBP7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Apbb1ipQ8R5A3 670 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Psmd6Q99JI4 389 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Tacc1Q6Y685 774 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Snrnp27Q8K194 155 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Hip1rQ9JKY5 1068 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ccdc43Q9CR29 222 aaKnown RBP7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 SufuQ9Z0P7 484 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Gnai2P08752 355 aaKnown RBP7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Gjb2Q00977 226 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 SfswapQ3USH5 945 aaKnown RBP7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ankrd49Q8VE42 238 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Nlrp4fQ66X05 959 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Larp1Q6ZQ58 1072 aaKnown RBP7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Wdr3Q8BHB4 942 aaKnown RBP7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ppp1r18Q8BQ30 594 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Smc1aQ9CU62 1233 aaKnown RBP7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 NeblQ0II04 452 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 PrimpolQ6P1E7 537 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ddx58Q6Q899 926 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Cnksr2Q80YA9 1032 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Luzp1Q8R4U7 1068 aaKnown RBP7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Luc7lQ9CYI4 371 aaKnown RBP7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Gas2l3Q3UWW6 683 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Atxn3Q9CVD2 355 aa7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 LrpprcQ6PB66 1392 aaKnown RBP7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Kif1cO35071 1100 aaKnown RBP7.03□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Smarca5Q91ZW3 1051 aaKnown RBP7.02□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Rfc1P35601 1131 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Enox2Q8R0Z2 598 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Znf704Q9ERQ3 566 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Ttll12Q3UDE2 639 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Sdad1Q80UZ2 687 aaKnown RBP7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Gle1Q8R322 699 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Top1mtQ8R4U6 593 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Cfap45Q9D9U9 551 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Gm11983V9GXS8 105 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Lonp2Q9DBN5 852 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Ccdc91Q9D8L5 442 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Atp1a4Q9WV27 1032 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Neurod6P48986 337 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Tyro3P55144 880 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Fam71bQ5STT6 665 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Zmynd15Q8C0R7 736 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Apol7cQ8C6E1 369 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Q8VDP2 222 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Prc1Q99K43 603 aaKnown RBP7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Stxbp4Q9WV89 557 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Tspyl3Q3UYP3 334 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Srgap3Q812A2 1099 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Nrg3O35181 713 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Me1P06801 572 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Atp8b1Q148W0 1251 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Acbd5Q5XG73 508 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Skor1Q8BX46 964 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Ccdc57Q6PHN1 1016 aa7.02□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Rbm42Q91V81 474 aaKnown RBP7.01□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Ccdc162pQ0VG85 912 aa7.01□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Bin1O08539 588 aaKnown RBP7.01□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Naip1Q9QWK5 1403 aa7.01□□□□□ -1.29
Ubr4-212ENSMUST00000165860 HdgfP51859 237 aaKnown RBP7.01□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Nrde2Q80XC6 1172 aa7.01□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Cacna2d3Q9Z1L5 1091 aa7.01□□□□□ -1.29
Ubr4-212ENSMUST00000165860 GmnnO88513 206 aa7.01□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Adcy2Q80TL1 1090 aa7.01□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Ift74Q8BKE9 600 aa7.01□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Ribc1Q9D0B8 379 aa7.01□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Cecr2E9Q2Z1 1453 aa7.01□□□□□ -1.29
Ubr4-212ENSMUST00000165860 Atp2b3Q0VF55 1220 aa7.01□□□□□ -1.29
Ubr4-212ENSMUST00000165860 EappQ5BU09 281 aa7.01□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms