RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Hoxb7P09024 217 aa18.71■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Eif4a2P10630 407 aa18.71■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Map9Q3TRR0 646 aa18.71■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Ltv1Q6NSQ7 470 aaKnown RBP18.71■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Mcm4P49717 862 aa18.71■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Pof1bQ8K4L4 587 aa18.71■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Pms1Q8K119 917 aa18.71■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 MicalclQ9D5U9 680 aa18.71■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 PzpQ61838 1495 aa18.71■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Spty2d1Q68FG3 682 aa18.71■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Luc7lQ9CYI4 371 aaKnown RBP18.71■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Abcc6Q9R1S7 1498 aa18.7■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Ncbp1Q3UYV9 790 aaKnown RBP18.7■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Rrbp1Q99PL5 1605 aaKnown RBP18.7■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Znf697Q569E7 569 aa18.7■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Zc3h12cQ5DTV4 884 aa18.7■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Psrc1Q9D0P7 329 aa18.7■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 PtprgQ05909 1442 aa18.69■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Igflr1Q3U4N7 345 aa18.69■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Smarca5Q91ZW3 1051 aaKnown RBP18.69■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Krt84Q99M73 603 aa18.69■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Abca5Q8K448 1642 aa18.69■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Mcm3P25206 812 aaKnown RBP18.69■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Rcan3Q9JKK0 239 aa18.69■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Irgm2A0A140LIF8 407 aa18.68■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Fsd2Q8BZ52 692 aa18.68■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Hoxa7P02830 229 aa18.68■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Eno4Q8C042 619 aa18.68■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Brf1Q8CFK2 676 aa18.68■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Adgrl2Q8JZZ7 1487 aa18.68■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Cep170Q6A065 1588 aa18.68■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Pafah1b1P63005 410 aaKnown RBP18.68■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Ankle2Q6P1H6 964 aa18.68■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Dnaaf4Q8R368 420 aa18.68■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Zbtb22Q9Z0G7 638 aa18.68■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Prkar2bP31324 416 aa18.67■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Slc14a2Q8R4T9 930 aa18.67■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Jakmip2D3YXK0 820 aa18.67■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Ppp1r42Q8R1Z4 357 aa18.67■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Ncoa1P70365 1447 aa18.67■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Ssr1Q9CY50 286 aaKnown RBP18.67■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Kdm3bQ6ZPY7 1562 aa18.67■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Idi1P58044 227 aa18.67■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 MpndQ3TV65 487 aa18.67■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Msl1Q6PDM1 616 aa18.67■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Riok1Q922Q2 567 aa18.67■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Fam13aQ8BGI4 693 aa18.66■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Cfap45Q9D9U9 551 aa18.66■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Rai14Q9EP71 979 aaKnown RBP18.66■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Cct4P80315 539 aaKnown RBP18.66■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 ThemisQ8BGW0 636 aa18.66■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Wdr33Q8K4P0 1330 aaKnown RBP18.66■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Zscan20B2KFW1 1030 aa18.66■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Gas2l3Q3UWW6 683 aa18.66■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Rufy2Q8R4C2 606 aa18.66■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Mum1Q6DID5 682 aa18.66■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Tnni2P13412 182 aa18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Gimap8Q75N62 688 aa18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Ppm1eQ80TL0 749 aa18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 ImpactO55091 318 aa18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Cdkl5Q3UTQ8 938 aa18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Iqca1Q9CUL5 857 aa18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Cdca7Q9D0M2 382 aa18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Cwc25Q9DBF7 416 aa18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Znf18Q810A1 556 aa18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 CrklP47941 303 aa18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 AidaQ8C4Q6 305 aa18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 ImmtQ8CAQ8 757 aaKnown RBP18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Ccdc83Q9D4V3 305 aa18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Lrrc7Q80TE7 1490 aa18.65■□□□□ 0.58
Pcdh1-203ENSMUST00000160721 Cyp26c1B2RXA7 518 aa18.64■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Gm7347D3YYI9 267 aa18.64■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Speer4aF8VPX6 267 aa18.64■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Smc5Q8CG46 1101 aaKnown RBP18.64■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Gjb2Q00977 226 aa18.64■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Hvcn1Q3U2S8 269 aa18.64■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 NsmfQ99NF2 532 aa18.64■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Q3UPC7 1272 aa18.64■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Adck5Q80V03 582 aa18.64■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Nup133Q8R0G9 1155 aa18.64■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Pde1cQ64338 706 aa18.63■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 St5Q924W7 1134 aa18.63■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Gm42641I6L9G2 585 aa18.63■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Eya1P97767 591 aa18.63■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 AcrbpQ3V140 540 aa18.63■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 AtripQ8BMG1 785 aa18.63■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Lrrc9Q8CDN9 1456 aa18.63■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 PalldQ9ET54 1408 aa18.63■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 TxlnbQ8VBT1 685 aa18.63■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Amotl1Q9D4H4 968 aa18.63■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Mipol1Q9D9F8 279 aa18.63■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Supt6hQ62383 1726 aaKnown RBP18.63■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Hoxc9P09633 260 aa18.62■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Dydc1Q9D9T0 175 aa18.62■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Map3k19E9Q3S4 1311 aa18.62■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Cep131Q62036 1060 aa18.62■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Lrrc45Q8CIM1 670 aa18.62■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Ccdc85cE9Q6B2 420 aa18.62■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Zap70P43404 618 aa18.62■□□□□ 0.57
Pcdh1-203ENSMUST00000160721 Arhgef11Q68FM7 1552 aa18.62■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms