RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Cald1E9QA15 768 aaKnown RBP8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 VgfQ0VGU4 617 aa8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Ppm1eQ80TL0 749 aa8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Epb41l5Q8BGS1 731 aa8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Rapgef3Q8VCC8 918 aa8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 CactinQ9CS00 772 aaKnown RBP8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Rims2Q9EQZ7 1530 aa8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Rfx7F8VPJ6 1459 aa8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Mre11Q61216 706 aa8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Best3Q6H1V1 669 aa8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Iqcf4Q6P8Y2 204 aa8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Fbxo2Q80UW2 297 aa8.17□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Scaf11E9PZM7 1456 aaKnown RBP8.16□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Gm21663A0A0G2JE01 267 aa8.16□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 5031410I06RikE9Q4E0 267 aa8.16□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Gm5862K7N5V5 267 aa8.16□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Gm10220K7N660 267 aa8.16□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Pla2g2cP48076 150 aa8.16□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Cops2P61202 443 aaKnown RBP8.16□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Smpd1Q04519 627 aa8.16□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Kif3bQ61771 747 aa8.16□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Fkbp5Q64378 456 aa8.16□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Gtf2iQ9ESZ8 998 aaKnown RBP8.16□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Abcc6Q9R1S7 1498 aa8.16□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Duxf3A0A0N4SV92 674 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Kcng1A2BDX4 514 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Psmd1Q3TXS7 953 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Kiaa0753Q6A000 959 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Gimap8Q75N62 688 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Cxxc1Q9CWW7 660 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Fmn2Q9JL04 1578 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Plch2A2AP18 1501 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Uggt2E9Q4X2 1504 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Mphosph9A6H5Y1 991 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 MsmpB1AWI6 139 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Brpf3B2KF05 1204 aaKnown RBP8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Gja8P28236 440 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 SkiQ60698 725 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 IbspQ61711 324 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Edem1Q925U4 652 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Rrp7aQ9D1C9 280 aaKnown RBP8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Znf354bQ9QXT9 601 aa8.15□□□□□ -1.1
Ccdc38-203ENSMUST00000132214 Arhgap23Q69ZH9 1483 aa8.15□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Naip5Q9R016 1403 aa8.15□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Zfp644E9QA22 1323 aa8.14□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 PzpQ61838 1495 aa8.14□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 CltaO08585 235 aa8.14□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Fzd6Q61089 709 aa8.14□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Ddrgk1Q80WW9 315 aa8.14□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Klhl34A2AI76 644 aa8.14□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Hoxb3P09026 433 aa8.14□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Rnf19aP50636 840 aa8.14□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 NntQ61941 1086 aaKnown RBP8.14□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 UstQ8BUB6 407 aa8.14□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Kdm3bQ6ZPY7 1562 aa8.14□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Adgrb2Q8CGM1 1561 aa8.13□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Kcnn2P58390 839 aa8.13□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Tcerg1Q8CGF7 1100 aaKnown RBP8.13□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Ndufb5Q9CQH3 189 aa8.13□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Mei1Q9D4I2 1268 aa8.13□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Mapk1P63085 358 aa8.13□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Ptk7Q8BKG3 1062 aa8.13□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Erbb3Q61526 1339 aa8.12□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 A0A0U1RNP2 1173 aa8.12□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Vamp1Q62442 118 aa8.12□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Zfp251Q6PCX8 632 aa8.12□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Xrn1P97789 1719 aaKnown RBP8.12□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Topbp1Q6ZQF0 1515 aa8.12□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Kiaa1522A2A7S8 1013 aa8.11□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Wbp1lQ8BGW2 348 aa8.11□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Gtpbp4Q99ME9 634 aaKnown RBP8.11□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Tcea2Q9QVN7 299 aa8.11□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Il16O54824 1322 aa8.11□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Erich6D3Z6S9 713 aa8.11□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 PtprcP06800 1291 aa8.11□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Gse1Q3U3C9 1213 aa8.11□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Paxip1Q6NZQ4 1056 aa8.11□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Nop9Q8BMC4 636 aaKnown RBP8.11□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Fam212aQ9CX62 282 aa8.11□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Plpp6Q9D4F2 292 aa8.11□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 DroshaQ5HZJ0 1373 aaKnown RBP8.1□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Ppp4cP97470 307 aa8.1□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Rmi1Q9D4G9 616 aa8.1□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Fxr2Q9WVR4 673 aaKnown RBP8.1□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Hfm1D3Z4R1 1434 aa8.1□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 1700020D05RikQ99PB1 294 aa8.1□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 AdnpQ9Z103 1108 aaKnown RBP8.1□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Mast1Q9R1L5 1570 aa8.09□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Zc3h13E9Q784 1729 aaKnown RBP8.09□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Map3k9Q3U1V8 1077 aa8.09□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Pak2Q8CIN4 524 aa8.09□□□□□ -1.11
Ccdc38-203ENSMUST00000132214 Prss12O08762 761 aa8.09□□□□□ -1.12
Ccdc38-203ENSMUST00000132214 Ubxn4Q8VCH8 506 aa8.09□□□□□ -1.12
Ccdc38-203ENSMUST00000132214 Clp1Q99LI9 425 aa8.09□□□□□ -1.12
Ccdc38-203ENSMUST00000132214 Stau1Q9Z108 487 aaKnown RBP8.09□□□□□ -1.12
Ccdc38-203ENSMUST00000132214 Mecp2Q9Z2D6 484 aaKnown RBP8.09□□□□□ -1.12
Ccdc38-203ENSMUST00000132214 Kif21bQ9QXL1 1668 aa8.08□□□□□ -1.12
Ccdc38-203ENSMUST00000132214 KitP05532 979 aa8.08□□□□□ -1.12
Ccdc38-203ENSMUST00000132214 Gabpb2P81069 414 aa8.08□□□□□ -1.12
Ccdc38-203ENSMUST00000132214 Rab11fip3Q8CHD8 1047 aa8.08□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 213.5 ms