RNA–Protein interactions for RNA: ENSMUST00000120987.1

Trappc11-202, Transcript of Trafficking protein particle complex subunit 11, mousemouse

TSL 1 (best) BASIC

Gene Trappc11, Length 2,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc11-202ENSMUST00000120987 Triml2E9PW10 424 aa20.01■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Zap70P43404 618 aa20.01■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Bicc1Q99MQ1 977 aaKnown RBP20.01■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Erbb4Q61527 1308 aa20■□□□□ 0.79
Trappc11-202ENSMUST00000120987 4930523C07RikE9Q2T4 99 aa20■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Dmrt2Q8BG36 561 aa20■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Ppm1mQ8BU27 406 aa20■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Fbxo41Q6NS60 873 aa19.99■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Jmjd4Q8BFT6 427 aa19.99■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Gm12185Q5NCB2 835 aa19.99■□□□□ 0.79
Trappc11-202ENSMUST00000120987 B4galnt3Q6L8S8 986 aa19.99■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Mphosph10Q810V0 681 aaKnown RBP19.99■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Fgd1P52734 960 aa19.98■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Taok3Q8BYC6 898 aa19.98■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Dbr1Q923B1 550 aa19.98■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Chmp5Q9D7S9 219 aa19.98■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Ank1Q02357 1862 aa19.98■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Hs1bp3Q3TC93 395 aa19.97■□□□□ 0.79
Trappc11-202ENSMUST00000120987 HellsQ60848 821 aa19.97■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Ly75Q60767 1723 aa19.97■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Stk36Q69ZM6 1316 aa19.97■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Trim27Q62158 513 aa19.96■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Ankle2Q6P1H6 964 aa19.96■□□□□ 0.79
Trappc11-202ENSMUST00000120987 MypnQ5DTJ9 1315 aa19.96■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Gnai2P08752 355 aaKnown RBP19.96■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Rps6ka4Q9Z2B9 773 aa19.96■□□□□ 0.79
Trappc11-202ENSMUST00000120987 Fam13aQ8BGI4 693 aa19.95■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Klc3Q91W40 508 aa19.95■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Cfdp1O88271 295 aaKnown RBP19.95■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Cers3Q1A3B0 383 aa19.95■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Map3k13Q1HKZ5 959 aa19.95■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Lrit1Q8K099 624 aa19.94■□□□□ 0.78
Trappc11-202ENSMUST00000120987 MetP16056 1379 aa19.94■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Tlr7P58681 1050 aa19.93■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Zbtb40Q6PCS8 1258 aa19.93■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Atl3Q91YH5 541 aa19.93■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Gigyf1Q99MR1 1044 aaKnown RBP19.93■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Ppfibp2O35711 882 aa19.92■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Pde4dQ01063 747 aa19.92■□□□□ 0.78
Trappc11-202ENSMUST00000120987 EspnQ9ET47 871 aa19.91■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Zbtb1Q91VL9 713 aa19.91■□□□□ 0.78
Trappc11-202ENSMUST00000120987 SkilQ60665 675 aa19.9■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Liat1Q810M6 228 aa19.9■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Nip7Q9CXK8 180 aaKnown RBP19.9■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Lmbr1lQ9D1E5 489 aa19.9■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Ric1Q69ZJ7 1422 aa19.9■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Sos2Q02384 1333 aa19.9■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Zcrb1Q9CZ96 217 aaKnown RBP19.9■□□□□ 0.78
Trappc11-202ENSMUST00000120987 Wwc1Q5SXA9 1104 aa19.89■□□□□ 0.77
Trappc11-202ENSMUST00000120987 HnrnpuQ8VEK3 800 aaKnown RBP19.89■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Pnmal2G3X9N3 661 aa19.88■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Atp8b2P98199 1209 aa19.88■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Afg3l2Q8JZQ2 802 aaKnown RBP19.88■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Ppp1r42Q8R1Z4 357 aa19.88■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Grm8P47743 908 aa19.88■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Miga2Q8BK03 593 aa19.88■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Eif3aP23116 1344 aaKnown RBP19.87■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Ripor2Q80U16 1078 aa19.87■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Srgap3Q812A2 1099 aa19.87■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Arhgap33Q80YF9 1305 aa19.87■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Slfnl1Q8BHW9 410 aa19.87■□□□□ 0.77
Trappc11-202ENSMUST00000120987 CarsQ9ER72 831 aaKnown RBP19.87■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Ltb4r2Q9JJL9 360 aa19.87■□□□□ 0.77
Trappc11-202ENSMUST00000120987 C4bP01029 1738 aa19.86■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Mrc1Q61830 1456 aa19.86■□□□□ 0.77
Trappc11-202ENSMUST00000120987 NmiO35309 314 aa19.86■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Cwc27Q3TKY6 469 aa19.86■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Ddx58Q6Q899 926 aa19.86■□□□□ 0.77
Trappc11-202ENSMUST00000120987 AK157302I3ITR1 129 aa19.85■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Ier5O89113 308 aa19.85■□□□□ 0.77
Trappc11-202ENSMUST00000120987 LifrP42703 1092 aa19.85■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Tgfb1i1Q62219 461 aa19.85■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Kiaa0319lQ8K135 1048 aa19.85■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Isca1Q9D924 129 aa19.85■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Ssc5dQ8BV57 1371 aa19.85■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Arap2Q8BZ05 1703 aa19.85■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Bicdl1A0JNT9 577 aa19.84■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Fkbp5Q64378 456 aa19.84■□□□□ 0.77
Trappc11-202ENSMUST00000120987 FanclQ9CR14 375 aa19.84■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Brd1E9PZ26 1189 aaKnown RBP19.83■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Ubap1lG3UW59 384 aa19.83■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Mmp8O70138 465 aa19.83■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Adam1aQ60813 791 aa19.83■□□□□ 0.77
Trappc11-202ENSMUST00000120987 Soga3Q6NZL0 945 aa19.83■□□□□ 0.76
Trappc11-202ENSMUST00000120987 ScaperF8VQ70 1398 aaKnown RBP19.82■□□□□ 0.76
Trappc11-202ENSMUST00000120987 Lama4P97927 1816 aa19.82■□□□□ 0.76
Trappc11-202ENSMUST00000120987 Casz1Q9CWL2 1761 aa19.82■□□□□ 0.76
Trappc11-202ENSMUST00000120987 Mum1Q6DID5 682 aa19.82■□□□□ 0.76
Trappc11-202ENSMUST00000120987 Ppp6r1Q7TSI3 856 aa19.82■□□□□ 0.76
Trappc11-202ENSMUST00000120987 Eif4g2Q62448 906 aaKnown RBP19.81■□□□□ 0.76
Trappc11-202ENSMUST00000120987 Nlrp9bQ66X22 1003 aa19.81■□□□□ 0.76
Trappc11-202ENSMUST00000120987 Smarca5Q91ZW3 1051 aaKnown RBP19.81■□□□□ 0.76
Trappc11-202ENSMUST00000120987 Nphp1Q9QY53 687 aa19.81■□□□□ 0.76
Trappc11-202ENSMUST00000120987 Prr5lA2AVJ5 370 aa19.8■□□□□ 0.76
Trappc11-202ENSMUST00000120987 AbraQ8BUZ1 375 aa19.8■□□□□ 0.76
Trappc11-202ENSMUST00000120987 Sart3Q9JLI8 962 aaKnown RBP19.8■□□□□ 0.76
Trappc11-202ENSMUST00000120987 Ankrd31A0A140LI88 1765 aa19.8■□□□□ 0.76
Trappc11-202ENSMUST00000120987 Atg4a-psA0A0G2JFS9 396 aa19.8■□□□□ 0.76
Trappc11-202ENSMUST00000120987 Fam71e1A1L3C1 212 aa19.8■□□□□ 0.76
Trappc11-202ENSMUST00000120987 GalcP54818 684 aa19.8■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms