RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Mdc1Q5PSV9 1707 aa13.06□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Parp14Q2EMV9 1817 aa13.06□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Gse1Q3U3C9 1213 aa13.06□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Ccne1Q61457 408 aa13.06□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Rcan3Q9JKK0 239 aa13.06□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Kif24Q6NWW5 1356 aa13.06□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Zscan25B2RX31 543 aa13.05□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Mcm2P97310 904 aa13.05□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Gtpbp6Q3U6U5 514 aa13.05□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Gripap1Q8VD04 806 aa13.05□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Zhx1P70121 873 aa13.05□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Chl1P70232 1209 aa13.05□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Prkar2bP31324 416 aa13.04□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Tm6sf1P58749 370 aa13.04□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Dmrt2Q8BG36 561 aa13.04□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Prune1Q8BIW1 454 aa13.04□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Dzip1Q8BMD2 852 aa13.04□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Bcar3Q9QZK2 820 aa13.04□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Lmod3E9QA62 571 aa13.04□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Dixdc1Q80Y83 711 aa13.04□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 PtmsQ9D0J8 101 aaKnown RBP13.04□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Hoxc9P09633 260 aa13.04□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Dnajc10Q9DC23 793 aa13.04□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Cyp46a1Q9WVK8 500 aa13.04□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Scn7aB1AYL1 1681 aa13.03□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Zkscan16A2ALW2 728 aa13.03□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 TmpoQ61033 693 aaKnown RBP13.03□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 TatQ8QZR1 454 aa13.03□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Sytl4Q9R0Q1 673 aa13.03□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 NexnQ7TPW1 607 aa13.02□□□□□ -0.32
Prpf40b-202ENSMUST00000118287 Eya1P97767 591 aa13.02□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Ggnbp2Q5SV77 696 aa13.02□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Erc2Q6PH08 957 aa13.02□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Pdcl2Q78Y63 240 aa13.02□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Tshz3Q8CGV9 1081 aa13.02□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Chd1lQ9CXF7 900 aa13.02□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Wnk3Q80XP9 1757 aa13.02□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Atg4a-psA0A0G2JFS9 396 aa13.02□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Kif4P33174 1231 aa13.02□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Atg4aQ8C9S8 396 aa13.02□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Pnma3Q8JZW8 466 aa13.02□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Gimap6Q8K349 305 aa13.02□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Irf6P97431 467 aa13.01□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Pcmtd1P59913 357 aa13.01□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Ncoa4Q5U4H9 625 aa13.01□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 PtprvP70289 1705 aa13.01□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Olfml1Q8BSH2 233 aa13□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Hmox1P14901 289 aa12.99□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Filip1lQ6P6L0 1131 aa12.99□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.99□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Rtf1A2AQ19 715 aaKnown RBP12.99□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Prim1P20664 417 aa12.99□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Sv2bQ8BG39 683 aa12.99□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Gys2Q8VCB3 704 aa12.99□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Nfat5Q9WV30 1534 aa12.98□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 E4f1Q8CCE9 783 aa12.98□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Naa30Q8CES0 364 aa12.98□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Ano8Q6PB70 1060 aa12.98□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Acsbg1Q99PU5 721 aa12.98□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Bcl11bQ99PV8 884 aa12.98□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 AdnpQ9Z103 1108 aaKnown RBP12.98□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Arhgap4B1AUY3 965 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Mindy4Q3UQI9 744 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Phf23Q8BSN5 401 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Elp1Q7TT37 1333 aaKnown RBP12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Lekr1B2RVN1 116 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Snap23O09044 210 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Babam1Q3UI43 333 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Gm21698A0A087WQP8 267 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Gm45015A0A140LII9 184 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Gm18336A0A140LIU8 765 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Gm21671G3UY31 267 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 EvcP57680 1005 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 St18Q80TY4 1045 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Kdm4aQ8BW72 1064 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 WdpcpQ8C456 722 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Amotl2Q8K371 772 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Kcnh5Q920E3 988 aa12.97□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Fmnl2A2APV2 1086 aa12.96□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Casc1Q6TDU8 730 aa12.96□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Smim5Q8BT42 78 aa12.96□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Jakmip1Q8BVL9 626 aa12.96□□□□□ -0.33
Prpf40b-202ENSMUST00000118287 Serpina10Q8R121 448 aa12.96□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Srgap3Q812A2 1099 aa12.95□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 NcapgE9PWG6 1004 aa12.95□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Vwa3bJ9JI28 736 aa12.95□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Nol11Q8BJW5 723 aaKnown RBP12.95□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Mrps27Q8BK72 415 aaKnown RBP12.95□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 RestQ8VIG1 1082 aa12.95□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 ScaperF8VQ70 1398 aaKnown RBP12.95□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Mum1Q6DID5 682 aa12.95□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 TnrQ8BYI9 1358 aa12.94□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Q3TQI7 289 aaKnown RBP12.94□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Ptpdc1Q6NZK8 747 aa12.94□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Txnrd1Q9JMH6 613 aa12.94□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Robo1O89026 1612 aa12.94□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Zkscan2G3X952 960 aa12.93□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Fam13bQ8K2H3 851 aa12.93□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 MccE9PWI3 1003 aa12.93□□□□□ -0.34
Prpf40b-202ENSMUST00000118287 Gnai2P08752 355 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms