RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Ccdc158Q8CDI6 1109 aa18.01■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Ankrd26Q811D2 1581 aa18.01■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Txndc16Q7TN22 820 aa18.01■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Mrps27Q8BK72 415 aaKnown RBP18.01■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Mrpl44Q9CY73 333 aaKnown RBP18.01■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Ncapg2Q6DFV1 1138 aa18.01■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Knop1Q9Z2Q2 478 aaKnown RBP18.01■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Ppfia1B2RXQ2 1266 aa18.01■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Echdc1Q9D9V3 322 aa18.01■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Gm10093D3YYI8 482 aa18■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Hdac1O09106 482 aaKnown RBP18■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Gnat3Q3V3I2 354 aa18■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Ccne1Q61457 408 aa18■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Rapgef6Q5NCJ1 1609 aa18■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Cavin2Q63918 418 aaKnown RBP17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Golim4Q8BXA1 655 aa17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 KdrP35918 1367 aa17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Ces1hD3Z298 562 aa17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Ssr1Q9CY50 286 aaKnown RBP17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Cetn2Q9R1K9 172 aa17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Erlin1Q91X78 346 aa17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Fam50bQ9WTJ8 334 aa17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Gapvd1Q6PAR5 1458 aa17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Kdm3aQ6PCM1 1323 aa17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Cbx1P83917 185 aaKnown RBP17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Traf3ip1Q149C2 625 aa17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Soga3Q6NZL0 945 aa17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Dydc1Q9D9T0 175 aa17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Mmel1Q9JLI3 765 aa17.99■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Duxf3A0A0N4SV92 674 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Cers3Q1A3B0 383 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Elp1Q7TT37 1333 aaKnown RBP17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Hmgb2P30681 210 aaKnown RBP17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Vps37dQ810I0 261 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Liat1Q810M6 228 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Slc5a1Q8C3K6 665 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Lrrfip2Q91WK0 415 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Ppip5k1A2ARP1 1436 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Slx4Q6P1D7 1565 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Stat1P42225 749 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Nol11Q8BJW5 723 aaKnown RBP17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 CenppQ9CZ92 286 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Api5O35841 504 aaKnown RBP17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Erich4Q3UNU4 136 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Prm3Q62100 101 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Smc1bQ920F6 1248 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Kdm2bQ6P1G2 1309 aa17.98■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Chpf2Q3UU43 768 aa17.97■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Zbtb22Q9Z0G7 638 aa17.97■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Srgap1Q91Z69 1062 aa17.97■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Ankle2Q6P1H6 964 aa17.97■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Sass6Q80UK7 654 aa17.97■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Snw1Q9CSN1 536 aaKnown RBP17.96■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Gm10563F6WIE4 79 aa17.96■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Nup133Q8R0G9 1155 aa17.96■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Gm18336A0A140LIU8 765 aa17.96■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Pde4dQ01063 747 aa17.96■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Aldh8a1Q8BH00 487 aa17.96■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Eif4g1Q6NZJ6 1600 aaKnown RBP17.96■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Gm42641I6L9G2 585 aa17.96■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 AtripQ8BMG1 785 aa17.96■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Tubb4aQ9D6F9 444 aa17.96■□□□□ 0.47
Pcdha9-201ENSMUST00000115659 Cfap157Q0VFX2 523 aa17.96■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Ccdc93Q7TQK5 629 aa17.96■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Il1rapl2Q9ERS6 686 aa17.96■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Atp7aQ64430 1491 aa17.95■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Nkx1-2P42580 305 aa17.95■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Trim27Q62158 513 aa17.95■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 InsrP15208 1372 aa17.95■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Ktn1Q61595 1327 aaKnown RBP17.95■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Usp25P57080 1055 aa17.95■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Jmjd4Q8BFT6 427 aa17.95■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Krt23Q99PS0 422 aa17.95■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Ttc21aQ8C0S4 1314 aa17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Znf131Q8K3J5 619 aa17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Themis2Q91YX0 663 aa17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Ripk4Q9ERK0 786 aa17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Sdc2P43407 202 aa17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Map3k2Q61083 619 aa17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Smco2Q9DA21 347 aa17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Baiap2l1Q9DBJ3 514 aa17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 IncenpQ9WU62 880 aa17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Cct2P80314 535 aaKnown RBP17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Cep120Q7TSG1 988 aa17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Naa15Q80UM3 865 aaKnown RBP17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Gigyf1Q99MR1 1044 aaKnown RBP17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Fbf1A2A870 1173 aa17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Ltv1Q6NSQ7 470 aaKnown RBP17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Cep135Q6P5D4 1140 aa17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Ccdc73Q8CDM4 1066 aa17.94■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Fancd2Q80V62 1450 aa17.93■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Myd88P22366 296 aa17.93■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 EappQ5BU09 281 aa17.93■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Znf653Q6YND2 615 aa17.93■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Atp10dQ8K2X1 1416 aa17.93■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Brd1E9PZ26 1189 aaKnown RBP17.93■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Cfap53Q9D439 514 aa17.93■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Fez2Q6TYB5 348 aa17.93■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 TimelessQ9R1X4 1197 aa17.93■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Tbc1d2bQ3U0J8 965 aa17.93■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms