RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Btbd11Q6GQW0 1109 aa9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Ccdc178Q8CDV0 866 aa9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 SrrtQ99MR6 875 aaKnown RBP9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Echdc1Q9D9V3 322 aa9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Psma5Q9Z2U1 241 aaKnown RBP9.86□□□□□ -0.83
Bdnf-208ENSMUST00000111049 NktrP30415 1453 aa9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Eif3aP23116 1344 aaKnown RBP9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Zscan25B2RX31 543 aa9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Ube2hP62257 183 aa9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Polr3gQ6NXY9 223 aa9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Sh3bgrQ9WUZ7 214 aa9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Disp3A3KFU9 1347 aa9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Podxl2Q8CAE9 603 aa9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Sytl4Q9R0Q1 673 aa9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Hoxc9P09633 260 aa9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Trim30aP15533 496 aa9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Cnnm3Q32NY4 713 aa9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Bms1Q6PGF5 1284 aaKnown RBP9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Nup88Q8CEC0 753 aaKnown RBP9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Ercc6l2Q9JIM3 1537 aa9.85□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Ppfia1B2RXQ2 1266 aa9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Mcm3P25206 812 aaKnown RBP9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Mum1Q6DID5 682 aa9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Tex2Q6ZPJ0 1128 aaKnown RBP9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Mlh1Q9JK91 760 aa9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Spef2Q8C9J3 1734 aa9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Rad50P70388 1312 aa9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Nckap5lQ6GQX2 1323 aa9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Atf5O70191 283 aa9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Idi1P58044 227 aa9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Hvcn1Q3U2S8 269 aa9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Nol8Q3UHX0 1147 aaKnown RBP9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Gzf1Q4VBD9 706 aa9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Ube2q2Q8K2Z8 378 aa9.84□□□□□ -0.83
Bdnf-208ENSMUST00000111049 Adcy5P84309 1262 aa9.83□□□□□ -0.84
Bdnf-208ENSMUST00000111049 FancaQ9JL70 1439 aa9.83□□□□□ -0.84
Bdnf-208ENSMUST00000111049 CrebrfQ8CDG5 640 aaKnown RBP9.83□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Amotl2Q8K371 772 aa9.83□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Bicd2Q921C5 820 aa9.83□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Cnksr1A2A9K7 700 aa9.83□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Gimap6Q8K349 305 aa9.83□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Ccar2Q8VDP4 922 aaKnown RBP9.83□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Amotl1Q9D4H4 968 aa9.83□□□□□ -0.84
Bdnf-208ENSMUST00000111049 PhaxQ9JJT9 385 aaKnown RBP9.83□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Prdm2A2A7B5 1709 aaKnown RBP9.83□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Nphp3Q7TNH6 1325 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Syt1P46096 421 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Neurod6P48986 337 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Tnnt2P50752 301 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 CemipQ8BI06 1361 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Fmnl2A2APV2 1086 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 EappQ5BU09 281 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Chmp7Q8R1T1 451 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Zbtb22Q9Z0G7 638 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Tpm3P21107 285 aaKnown RBP9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Mindy4Q3UQI9 744 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Map3k2Q61083 619 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Rad17Q6NXW6 688 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Unc5clQ6R653 518 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Slc26a8Q8R0C3 999 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Dip2aQ8BWT5 1523 aa9.82□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Gm10471E9Q1C7 252 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Tpd52l1O54818 204 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Wdr93Q402B2 695 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Anp32cQ64G17 123 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Kiaa0754Q69ZZ9 979 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Ccdc66Q6NS45 935 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Ppp6r1Q7TSI3 856 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Tti2Q8BGV4 512 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Ccdc7Q9D541 371 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Samd1D3YXK1 519 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 F2rP30558 430 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Cep57l1Q8VDS7 400 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Hmgn5Q9JL35 406 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Cdk12Q14AX6 1484 aaKnown RBP9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Q8C5K5 320 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Atg3Q9CPX6 314 aa9.81□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Chd4Q6PDQ2 1915 aaKnown RBP9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 AppP12023 770 aa9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Pa2g4P50580 394 aaKnown RBP9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Ifit2Q64112 472 aa9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Rhot2Q8JZN7 620 aa9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Il1rapl2Q9ERS6 686 aa9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Igbp1bQ9QZ29 343 aa9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Kif1aP33173 1695 aa9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Cfap73J3QPZ5 306 aa9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 TnmdQ9EP64 317 aa9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Mybbp1aQ7TPV4 1344 aaKnown RBP9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 CoilQ5SU73 570 aa9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Nop14Q8R3N1 860 aaKnown RBP9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Mmel1Q9JLI3 765 aa9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Wdr33Q8K4P0 1330 aaKnown RBP9.8□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Rbm8a2A0A0N4SUH6 174 aa9.79□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Kcnh5Q920E3 988 aa9.79□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Rbm8aQ9CWZ3 174 aa9.79□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Krt85Q9Z2T6 507 aa9.79□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Tmem94Q7TSH8 1360 aa9.79□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Cavin1O54724 392 aa9.79□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Fbxo2Q80UW2 297 aa9.79□□□□□ -0.84
Bdnf-208ENSMUST00000111049 Naa30Q8CES0 364 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms