RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Nip7Q9CXK8 180 aaKnown RBP12.89□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Tmem87bQ8BKU8 555 aa12.89□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Chaf1aQ9QWF0 911 aa12.89□□□□□ -0.35
Scn8a-203ENSMUST00000108908 TnnQ80Z71 1560 aa12.89□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Pde4dQ01063 747 aa12.89□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Erlin2Q8BFZ9 340 aa12.89□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ripply1Q2WG77 201 aa12.89□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Trim30cD3YVI9 513 aa12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 EvcP57680 1005 aa12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 CenpqQ9CPQ5 267 aa12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ythdc2B2RR83 1445 aaKnown RBP12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Smarcc1P97496 1104 aa12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Znf131Q8K3J5 619 aa12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Spg7Q3ULF4 781 aa12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Paxip1Q6NZQ4 1056 aa12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 PaskQ8CEE6 1383 aa12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Phf14Q9D4H9 881 aa12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Kif21bQ9QXL1 1668 aa12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Pet2A2AHY8 747 aa12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ankrd44B2RXR6 993 aa12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Lrrfip1Q3UZ39 729 aaKnown RBP12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Slc14a2Q8R4T9 930 aa12.88□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Pla2r1Q62028 1487 aa12.87□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Rbm27Q5SFM8 1060 aaKnown RBP12.87□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Fam170aQ66LM6 333 aa12.87□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Znf653Q6YND2 615 aa12.87□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Knop1Q9Z2Q2 478 aaKnown RBP12.87□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Trim25Q61510 634 aaKnown RBP12.87□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ccdc66Q6NS45 935 aa12.87□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Hs1bp3Q3TC93 395 aa12.87□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Kcnj4P52189 445 aa12.87□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Wdr63B2RY71 923 aa12.87□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ssh2Q5SW75 1423 aa12.87□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ift57Q8BXG3 429 aa12.87□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Luzp1Q8R4U7 1068 aaKnown RBP12.87□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ankle2Q6P1H6 964 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Znf18Q810A1 556 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Rbm19Q8R3C6 952 aaKnown RBP12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Asxl2Q8BZ32 1370 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Trim11Q99PQ2 467 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 RarsQ9D0I9 660 aaKnown RBP12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Cdk13Q69ZA1 1511 aaKnown RBP12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 PrkcshO08795 521 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ppp1r21Q3TDD9 780 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Cep120Q7TSG1 988 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Abcc1O35379 1528 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Gm156Q58A37 223 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Znf287Q9EQB9 759 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Nap1l5Q9JJF0 156 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Disp1Q3TDN0 1521 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Dctn1O08788 1281 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Cacna2d4Q5RJF7 1116 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ddx19aQ61655 478 aaKnown RBP12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ccdc158Q8CDI6 1109 aa12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ccar2Q8VDP4 922 aaKnown RBP12.86□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Wdr7Q920I9 1489 aa12.85□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Lmbr1lQ9D1E5 489 aa12.85□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Echdc1Q9D9V3 322 aa12.85□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Mrvi1Q9WUX5 899 aaKnown RBP12.85□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ppip5k1A2ARP1 1436 aa12.85□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Kif1bQ60575 1816 aaKnown RBP12.85□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Uspl1Q3ULM6 1089 aa12.85□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Duxf3A0A0N4SV92 674 aa12.85□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ccnl1Q52KE7 532 aaKnown RBP12.85□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Cwc15Q9JHS9 229 aaKnown RBP12.85□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Limch1Q3UH68 1057 aa12.85□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Tmc2Q8R4P4 888 aa12.85□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Kank1E9Q238 1360 aa12.85□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Speer4dL7N216 212 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ddx46Q569Z5 1032 aaKnown RBP12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Txndc16Q7TN22 820 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Znf428Q8C1M2 176 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Q9D5Q8 446 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Stxbp4Q9WV89 557 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Traf3ip1Q149C2 625 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 FanclQ9CR14 375 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Phlpp2Q8BXA7 1320 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Gcc2Q8CHG3 1679 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Rad23bP54728 416 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Zc3h12cQ5DTV4 884 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Rnf41Q8BH75 317 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Ptcd1Q8C2E4 695 aaKnown RBP12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Bloc1s2Q9CWG9 143 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Rasa1E9PYG6 1038 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Eif4a2P10630 407 aa12.84□□□□□ -0.35
Scn8a-203ENSMUST00000108908 Fam83gQ5SWY7 812 aa12.83□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Mipol1Q9D9F8 279 aa12.83□□□□□ -0.36
Scn8a-203ENSMUST00000108908 ParvgQ9ERD8 331 aa12.83□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Anapc15-psA0A140T8L6 141 aa12.83□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Nfxl1E9Q8I7 918 aaKnown RBP12.83□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Bin1O08539 588 aaKnown RBP12.83□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Tsg101Q61187 391 aa12.83□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Larp6Q8BN59 492 aa12.83□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Stx6Q9JKK1 255 aa12.83□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Gli2Q0VGT2 1544 aa12.83□□□□□ -0.36
Scn8a-203ENSMUST00000108908 KdrP35918 1367 aa12.83□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Cdan1Q8CC12 1239 aa12.83□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Cul5Q9D5V5 780 aa12.83□□□□□ -0.36
Scn8a-203ENSMUST00000108908 LyarQ08288 388 aaKnown RBP12.82□□□□□ -0.36
Scn8a-203ENSMUST00000108908 Plagl1Q9JLQ4 704 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms