RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 ArxO35085 564 aa18.42■□□□□ 0.54
Trim11-203ENSMUST00000108810 PigbQ9JJQ0 542 aa18.42■□□□□ 0.54
Trim11-203ENSMUST00000108810 Pdia3P27773 505 aaKnown RBP18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 Bcar3Q9QZK2 820 aa18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 Cfdp1O88271 295 aaKnown RBP18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 Nucb1Q02819 459 aaKnown RBP18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 Ppm1mQ8BU27 406 aa18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 Slc5a1Q8C3K6 665 aa18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 TefQ9JLC6 301 aa18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 Gm21663A0A0G2JE01 267 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Gm7361D3Z6R1 267 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 5031410I06RikE9Q4E0 267 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Gm1979E9QAN3 267 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Gm5862K7N5V5 267 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Gm10220K7N660 267 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Prkab2Q6PAM0 271 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Smim5Q8BT42 78 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Eif3aP23116 1344 aaKnown RBP18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Bicc1Q99MQ1 977 aaKnown RBP18.39■□□□□ 0.53
Trim11-203ENSMUST00000108810 Col4a1P02463 1669 aa18.39■□□□□ 0.53
Trim11-203ENSMUST00000108810 Akap11E9Q777 1895 aa18.39■□□□□ 0.53
Trim11-203ENSMUST00000108810 Cnnm1Q0GA42 951 aa18.39■□□□□ 0.53
Trim11-203ENSMUST00000108810 Map3k13Q1HKZ5 959 aa18.39■□□□□ 0.53
Trim11-203ENSMUST00000108810 Ints5Q8CHT3 1018 aa18.38■□□□□ 0.53
Trim11-203ENSMUST00000108810 Efcab2Q9CQ46 164 aa18.38■□□□□ 0.53
Trim11-203ENSMUST00000108810 Ttll7A4Q9F0 912 aa18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 Tgfb1i1Q62219 461 aa18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 Ptpdc1Q6NZK8 747 aa18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 Tfip11Q9ERA6 838 aaKnown RBP18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 Gm21680A0A0G2JGR8 267 aa18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 Zkscan2G3X952 960 aa18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 GorabQ8BRM2 368 aa18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 Hoxa7P02830 229 aa18.36■□□□□ 0.53
Trim11-203ENSMUST00000108810 RestQ8VIG1 1082 aa18.36■□□□□ 0.53
Trim11-203ENSMUST00000108810 AceP09470 1312 aa18.36■□□□□ 0.53
Trim11-203ENSMUST00000108810 Mum1Q6DID5 682 aa18.35■□□□□ 0.53
Trim11-203ENSMUST00000108810 Grm8P47743 908 aa18.35■□□□□ 0.53
Trim11-203ENSMUST00000108810 Kiaa0232Q80U59 1396 aaKnown RBP18.35■□□□□ 0.53
Trim11-203ENSMUST00000108810 Ppip5k2Q6ZQB6 1129 aa18.34■□□□□ 0.53
Trim11-203ENSMUST00000108810 Q9D2X8 372 aa18.34■□□□□ 0.53
Trim11-203ENSMUST00000108810 Tceal9Q9DD24 104 aa18.34■□□□□ 0.53
Trim11-203ENSMUST00000108810 Rnf123Q5XPI3 1314 aa18.34■□□□□ 0.53
Trim11-203ENSMUST00000108810 Terf2O35144 541 aa18.34■□□□□ 0.53
Trim11-203ENSMUST00000108810 Slc39a6Q8C145 765 aa18.34■□□□□ 0.53
Trim11-203ENSMUST00000108810 Catsper2A2ARP9 588 aa18.33■□□□□ 0.53
Trim11-203ENSMUST00000108810 EngaseQ8BX80 734 aa18.33■□□□□ 0.53
Trim11-203ENSMUST00000108810 Abcc4E9Q236 1325 aa18.33■□□□□ 0.53
Trim11-203ENSMUST00000108810 Tpx2A2APB8 745 aaKnown RBP18.33■□□□□ 0.52
Trim11-203ENSMUST00000108810 Hspa2P17156 633 aa18.33■□□□□ 0.52
Trim11-203ENSMUST00000108810 Slc4a10Q5DTL9 1118 aa18.33■□□□□ 0.52
Trim11-203ENSMUST00000108810 MypnQ5DTJ9 1315 aa18.33■□□□□ 0.52
Trim11-203ENSMUST00000108810 Lmbr1lQ9D1E5 489 aa18.32■□□□□ 0.52
Trim11-203ENSMUST00000108810 Elp1Q7TT37 1333 aaKnown RBP18.32■□□□□ 0.52
Trim11-203ENSMUST00000108810 Ank1Q02357 1862 aa18.32■□□□□ 0.52
Trim11-203ENSMUST00000108810 Crb1Q8VHS2 1405 aa18.32■□□□□ 0.52
Trim11-203ENSMUST00000108810 Hmox1P14901 289 aa18.32■□□□□ 0.52
Trim11-203ENSMUST00000108810 CalcaP70160 136 aa18.31■□□□□ 0.52
Trim11-203ENSMUST00000108810 Cct4P80315 539 aaKnown RBP18.31■□□□□ 0.52
Trim11-203ENSMUST00000108810 Prune1Q8BIW1 454 aa18.31■□□□□ 0.52
Trim11-203ENSMUST00000108810 Trim52Q8CDV4 233 aa18.31■□□□□ 0.52
Trim11-203ENSMUST00000108810 Gimap5Q8BWF2 308 aa18.31■□□□□ 0.52
Trim11-203ENSMUST00000108810 Flad1Q8R123 492 aa18.31■□□□□ 0.52
Trim11-203ENSMUST00000108810 Sipa1l3G3X9J0 1776 aa18.3■□□□□ 0.52
Trim11-203ENSMUST00000108810 Noc3lQ8VI84 807 aaKnown RBP18.3■□□□□ 0.52
Trim11-203ENSMUST00000108810 Erbb4Q61527 1308 aa18.3■□□□□ 0.52
Trim11-203ENSMUST00000108810 Nlrp9bQ66X22 1003 aa18.29■□□□□ 0.52
Trim11-203ENSMUST00000108810 Kdm4cQ8VCD7 1054 aa18.29■□□□□ 0.52
Trim11-203ENSMUST00000108810 Nol8Q3UHX0 1147 aaKnown RBP18.29■□□□□ 0.52
Trim11-203ENSMUST00000108810 Ankle2Q6P1H6 964 aa18.29■□□□□ 0.52
Trim11-203ENSMUST00000108810 Erc2Q6PH08 957 aa18.29■□□□□ 0.52
Trim11-203ENSMUST00000108810 Pa2g4P50580 394 aaKnown RBP18.28■□□□□ 0.52
Trim11-203ENSMUST00000108810 Znf526Q8BI66 675 aa18.28■□□□□ 0.52
Trim11-203ENSMUST00000108810 Ybx3Q9JKB3 361 aaKnown RBP18.28■□□□□ 0.52
Trim11-203ENSMUST00000108810 Cyb5rlB1AS42 316 aa18.28■□□□□ 0.52
Trim11-203ENSMUST00000108810 VgfQ0VGU4 617 aa18.27■□□□□ 0.52
Trim11-203ENSMUST00000108810 1700010I14RikQ7TPG0 532 aa18.27■□□□□ 0.52
Trim11-203ENSMUST00000108810 Ripor2Q80U16 1078 aa18.27■□□□□ 0.52
Trim11-203ENSMUST00000108810 Nav1Q8CH77 1875 aa18.27■□□□□ 0.52
Trim11-203ENSMUST00000108810 Kcnh4A2A5F7 1018 aa18.27■□□□□ 0.51
Trim11-203ENSMUST00000108810 Unc5clQ6R653 518 aa18.27■□□□□ 0.51
Trim11-203ENSMUST00000108810 Zbtb3Q91X45 518 aa18.26■□□□□ 0.51
Trim11-203ENSMUST00000108810 Nsfl1cQ9CZ44 370 aaKnown RBP18.26■□□□□ 0.51
Trim11-203ENSMUST00000108810 Mrc1Q61830 1456 aa18.26■□□□□ 0.51
Trim11-203ENSMUST00000108810 Syde2E9PUP1 1314 aa18.25■□□□□ 0.51
Trim11-203ENSMUST00000108810 InsrrQ9WTL4 1300 aa18.25■□□□□ 0.51
Trim11-203ENSMUST00000108810 Zbtb40Q6PCS8 1258 aa18.25■□□□□ 0.51
Trim11-203ENSMUST00000108810 Kat6bQ8BRB7 1872 aa18.25■□□□□ 0.51
Trim11-203ENSMUST00000108810 Tnrc6cQ3UHC0 1690 aaKnown RBP18.25■□□□□ 0.51
Trim11-203ENSMUST00000108810 Mast2Q60592 1734 aa18.24■□□□□ 0.51
Trim11-203ENSMUST00000108810 Lrp6O88572 1613 aa18.24■□□□□ 0.51
Trim11-203ENSMUST00000108810 Pdlim2Q8R1G6 349 aa18.24■□□□□ 0.51
Trim11-203ENSMUST00000108810 Antxr1Q9CZ52 562 aa18.24■□□□□ 0.51
Trim11-203ENSMUST00000108810 Ddx58Q6Q899 926 aa18.23■□□□□ 0.51
Trim11-203ENSMUST00000108810 Htatsf1Q8BGC0 757 aa18.23■□□□□ 0.51
Trim11-203ENSMUST00000108810 Bcl2l12Q9D3J3 255 aa18.23■□□□□ 0.51
Trim11-203ENSMUST00000108810 NmiO35309 314 aa18.23■□□□□ 0.51
Trim11-203ENSMUST00000108810 Fam228bQ497Q6 232 aa18.23■□□□□ 0.51
Trim11-203ENSMUST00000108810 Zeb2Q9R0G7 1215 aa18.23■□□□□ 0.51
Trim11-203ENSMUST00000108810 Lrrc59Q922Q8 307 aaKnown RBP18.22■□□□□ 0.51
Trim11-203ENSMUST00000108810 Ccnl1Q52KE7 532 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms