RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Kdm3aQ6PCM1 1323 aa13.33□□□□□ -0.28
Chd3-202ENSMUST00000108661 PrxO55103 1391 aa13.33□□□□□ -0.28
Chd3-202ENSMUST00000108661 Txnrd1Q9JMH6 613 aa13.33□□□□□ -0.28
Chd3-202ENSMUST00000108661 Letm1Q9Z2I0 738 aa13.33□□□□□ -0.28
Chd3-202ENSMUST00000108661 Dpp7Q9ET22 506 aa13.32□□□□□ -0.28
Chd3-202ENSMUST00000108661 Igflr1Q3U4N7 345 aa13.32□□□□□ -0.28
Chd3-202ENSMUST00000108661 Ttll13A4Q9F6 804 aa13.32□□□□□ -0.28
Chd3-202ENSMUST00000108661 Lrrfip1Q3UZ39 729 aaKnown RBP13.32□□□□□ -0.28
Chd3-202ENSMUST00000108661 Thoc2B1AZI6 1594 aaKnown RBP13.31□□□□□ -0.28
Chd3-202ENSMUST00000108661 Bag4Q8CI61 457 aa13.31□□□□□ -0.28
Chd3-202ENSMUST00000108661 Talpid3E9PV87 1520 aa13.31□□□□□ -0.28
Chd3-202ENSMUST00000108661 Znhit6Q3UFB2 460 aaKnown RBP13.31□□□□□ -0.28
Chd3-202ENSMUST00000108661 Arhgef1Q61210 920 aaKnown RBP13.31□□□□□ -0.28
Chd3-202ENSMUST00000108661 Sh3d21Q7TSG5 549 aa13.31□□□□□ -0.28
Chd3-202ENSMUST00000108661 Eif5P59325 429 aaKnown RBP13.31□□□□□ -0.28
Chd3-202ENSMUST00000108661 Zrsr2Q62377 462 aaKnown RBP13.3□□□□□ -0.28
Chd3-202ENSMUST00000108661 Prkag2Q91WG5 566 aa13.3□□□□□ -0.28
Chd3-202ENSMUST00000108661 Dph6Q9CQ28 267 aa13.3□□□□□ -0.28
Chd3-202ENSMUST00000108661 Ppp2r3aB2RXC8 1150 aa13.3□□□□□ -0.28
Chd3-202ENSMUST00000108661 Hoxa7P02830 229 aa13.3□□□□□ -0.28
Chd3-202ENSMUST00000108661 Mctp2Q5RJH2 878 aa13.3□□□□□ -0.28
Chd3-202ENSMUST00000108661 PtprgQ05909 1442 aa13.3□□□□□ -0.28
Chd3-202ENSMUST00000108661 Usp5P56399 858 aaKnown RBP13.3□□□□□ -0.28
Chd3-202ENSMUST00000108661 Gpatch8A2A6A1 1505 aa13.3□□□□□ -0.28
Chd3-202ENSMUST00000108661 Tmem143Q8VD26 458 aa13.3□□□□□ -0.28
Chd3-202ENSMUST00000108661 Gli2Q0VGT2 1544 aa13.29□□□□□ -0.28
Chd3-202ENSMUST00000108661 Asxl2Q8BZ32 1370 aa13.29□□□□□ -0.28
Chd3-202ENSMUST00000108661 IntuQ059U7 942 aa13.29□□□□□ -0.28
Chd3-202ENSMUST00000108661 SrrtQ99MR6 875 aaKnown RBP13.29□□□□□ -0.28
Chd3-202ENSMUST00000108661 Cetn1P41209 172 aa13.29□□□□□ -0.28
Chd3-202ENSMUST00000108661 Rbm10Q99KG3 930 aaKnown RBP13.29□□□□□ -0.28
Chd3-202ENSMUST00000108661 InhbeO08717 350 aa13.29□□□□□ -0.28
Chd3-202ENSMUST00000108661 Ppp1r1bQ60829 194 aa13.29□□□□□ -0.28
Chd3-202ENSMUST00000108661 Slc13a4Q8BZ82 625 aa13.29□□□□□ -0.28
Chd3-202ENSMUST00000108661 Q9D5Q8 446 aa13.29□□□□□ -0.28
Chd3-202ENSMUST00000108661 Taf7Q9R1C0 341 aa13.29□□□□□ -0.28
Chd3-202ENSMUST00000108661 Rnf214Q8BFU3 668 aaKnown RBP13.28□□□□□ -0.28
Chd3-202ENSMUST00000108661 Tmem67Q8BR76 992 aa13.28□□□□□ -0.28
Chd3-202ENSMUST00000108661 OscarQ8VBT3 265 aa13.28□□□□□ -0.28
Chd3-202ENSMUST00000108661 Snx25Q3ZT31 840 aa13.28□□□□□ -0.28
Chd3-202ENSMUST00000108661 Disp1Q3TDN0 1521 aa13.28□□□□□ -0.28
Chd3-202ENSMUST00000108661 Ppp1r42Q8R1Z4 357 aa13.28□□□□□ -0.28
Chd3-202ENSMUST00000108661 CarsQ9ER72 831 aaKnown RBP13.28□□□□□ -0.28
Chd3-202ENSMUST00000108661 Zmynd15Q8C0R7 736 aa13.28□□□□□ -0.28
Chd3-202ENSMUST00000108661 Luc7lQ9CYI4 371 aaKnown RBP13.28□□□□□ -0.28
Chd3-202ENSMUST00000108661 4933402E13RikQ9D4D2 429 aa13.28□□□□□ -0.28
Chd3-202ENSMUST00000108661 ParnQ8VDG3 624 aa13.28□□□□□ -0.28
Chd3-202ENSMUST00000108661 Ccar2Q8VDP4 922 aaKnown RBP13.27□□□□□ -0.28
Chd3-202ENSMUST00000108661 NinlQ6ZQ12 1394 aa13.27□□□□□ -0.28
Chd3-202ENSMUST00000108661 Map4k4P97820 1233 aaKnown RBP13.27□□□□□ -0.28
Chd3-202ENSMUST00000108661 ScaperF8VQ70 1398 aaKnown RBP13.27□□□□□ -0.29
Chd3-202ENSMUST00000108661 Prdm11A2AGX3 565 aa13.27□□□□□ -0.29
Chd3-202ENSMUST00000108661 Tmem87aQ8BXN9 555 aa13.27□□□□□ -0.29
Chd3-202ENSMUST00000108661 Myl6bQ8CI43 207 aa13.27□□□□□ -0.29
Chd3-202ENSMUST00000108661 Slc1a4O35874 532 aa13.27□□□□□ -0.29
Chd3-202ENSMUST00000108661 Maco1Q7TQE6 664 aaKnown RBP13.27□□□□□ -0.29
Chd3-202ENSMUST00000108661 Adck5Q80V03 582 aa13.27□□□□□ -0.29
Chd3-202ENSMUST00000108661 Znf526Q8BI66 675 aa13.27□□□□□ -0.29
Chd3-202ENSMUST00000108661 ThemisQ8BGW0 636 aa13.26□□□□□ -0.29
Chd3-202ENSMUST00000108661 Usp33Q8R5K2 909 aa13.26□□□□□ -0.29
Chd3-202ENSMUST00000108661 Eif4g3Q80XI3 1579 aaKnown RBP13.26□□□□□ -0.29
Chd3-202ENSMUST00000108661 Anp32eP97822 260 aaKnown RBP13.26□□□□□ -0.29
Chd3-202ENSMUST00000108661 Zcrb1Q9CZ96 217 aaKnown RBP13.26□□□□□ -0.29
Chd3-202ENSMUST00000108661 Naip2Q9QUK4 1447 aa13.26□□□□□ -0.29
Chd3-202ENSMUST00000108661 Hoxb7P09024 217 aa13.26□□□□□ -0.29
Chd3-202ENSMUST00000108661 Casp1P29452 402 aa13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Zfp444Q3TDV8 331 aaKnown RBP13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 1700010I14RikQ7TPG0 532 aa13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Slc27a3O88561 667 aa13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Atp6v1aP50516 617 aaKnown RBP13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Aplp1Q03157 653 aa13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Nsrp1Q5NCR9 542 aa13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Ccdc173A0JLY1 547 aa13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Cnnm3Q32NY4 713 aa13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Rfx7F8VPJ6 1459 aa13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Abcd1P48410 736 aa13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Cep57l1Q8VDS7 400 aa13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Epb41l2O70318 988 aaKnown RBP13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Larp1Q6ZQ58 1072 aaKnown RBP13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Olfr247E9PVJ7 320 aa13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Olfr819K7N727 320 aa13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Rbm19Q8R3C6 952 aaKnown RBP13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 MthfsQ9D110 203 aa13.25□□□□□ -0.29
Chd3-202ENSMUST00000108661 Slc4a8Q8JZR6 1089 aa13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 Smarca5Q91ZW3 1051 aaKnown RBP13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 PzpQ61838 1495 aa13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 Secisbp2lQ6A098 1086 aaKnown RBP13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 Trappc8E9PWG2 1437 aa13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 Stx8O88983 236 aa13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 Esco1Q69Z69 843 aa13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 Echdc1Q9D9V3 322 aa13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 PdcQ9QW08 244 aa13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 Ncoa3O09000 1398 aa13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 Svs3aF2Z472 265 aa13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 Klhdc4Q921I2 584 aa13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 Tsg101Q61187 391 aa13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 GckrQ91X44 587 aa13.24□□□□□ -0.29
Chd3-202ENSMUST00000108661 BC005561E9Q5E2 1589 aa13.23□□□□□ -0.29
Chd3-202ENSMUST00000108661 Ankrd26Q811D2 1581 aa13.23□□□□□ -0.29
Chd3-202ENSMUST00000108661 Ccdc183A2AJB1 534 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms