RNA–Protein interactions for RNA: ENSMUST00000107938.7

Shank1-203, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Shank1, Length 9,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-203ENSMUST00000107938 Lrsam1Q80ZI6 727 aa18.12■□□□□ 0.49
Shank1-203ENSMUST00000107938 Nop53Q8BK35 484 aaKnown RBP18.12■□□□□ 0.49
Shank1-203ENSMUST00000107938 Speer4aF8VPX6 267 aa18.12■□□□□ 0.49
Shank1-203ENSMUST00000107938 Tmed1Q3V009 227 aa18.12■□□□□ 0.49
Shank1-203ENSMUST00000107938 Xab2Q9DCD2 855 aaKnown RBP18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Znf710Q3U288 666 aa18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Ribc1Q9D0B8 379 aa18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Nek4Q9Z1J2 792 aa18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Rsf1E9PWW9 1441 aaKnown RBP18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Kif6E9PX57 802 aa18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Eftud2O08810 971 aaKnown RBP18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Clip2Q9Z0H8 1047 aa18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Uso1Q9Z1Z0 959 aaKnown RBP18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Ccdc12Q8R344 166 aaKnown RBP18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Paip2bQ91W45 136 aa18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Tmco5aQ9D9D5 303 aa18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Gbp10Q000W5 611 aa18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Nol12Q8BG17 217 aa18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Speer4bQ9D9F7 267 aa18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Vps36Q91XD6 386 aa18.11■□□□□ 0.49
Shank1-203ENSMUST00000107938 Trim6Q8BGE7 488 aa18.1■□□□□ 0.49
Shank1-203ENSMUST00000107938 4931400O07RikQ9D4M5 137 aa18.1■□□□□ 0.49
Shank1-203ENSMUST00000107938 RcvrnP34057 202 aa18.1■□□□□ 0.49
Shank1-203ENSMUST00000107938 Cacna1dQ99246 2179 aa18.1■□□□□ 0.49
Shank1-203ENSMUST00000107938 Gbp5Q8CFB4 590 aa18.1■□□□□ 0.49
Shank1-203ENSMUST00000107938 Tnnc1P19123 161 aa18.1■□□□□ 0.49
Shank1-203ENSMUST00000107938 Ddx58Q6Q899 926 aa18.1■□□□□ 0.49
Shank1-203ENSMUST00000107938 Q8C5K5 320 aa18.1■□□□□ 0.49
Shank1-203ENSMUST00000107938 Nop2Q922K7 793 aaKnown RBP18.1■□□□□ 0.49
Shank1-203ENSMUST00000107938 Sh3gl3Q62421 347 aa18.09■□□□□ 0.49
Shank1-203ENSMUST00000107938 Rnf34Q99KR6 376 aa18.09■□□□□ 0.49
Shank1-203ENSMUST00000107938 Apbb1ipQ8R5A3 670 aa18.09■□□□□ 0.49
Shank1-203ENSMUST00000107938 Cul9Q80TT8 1865 aa18.09■□□□□ 0.49
Shank1-203ENSMUST00000107938 Ube2hP62257 183 aa18.09■□□□□ 0.49
Shank1-203ENSMUST00000107938 Nucb1Q02819 459 aaKnown RBP18.09■□□□□ 0.49
Shank1-203ENSMUST00000107938 Hs1bp3Q3TC93 395 aa18.09■□□□□ 0.49
Shank1-203ENSMUST00000107938 Cetn1P41209 172 aa18.08■□□□□ 0.49
Shank1-203ENSMUST00000107938 Gm15262A0A140LIQ5 728 aa18.08■□□□□ 0.49
Shank1-203ENSMUST00000107938 Mum1l1Q4VA55 681 aa18.08■□□□□ 0.49
Shank1-203ENSMUST00000107938 Adcy3Q8VHH7 1145 aa18.08■□□□□ 0.49
Shank1-203ENSMUST00000107938 Gm10093D3YYI8 482 aa18.08■□□□□ 0.49
Shank1-203ENSMUST00000107938 Hdac1O09106 482 aaKnown RBP18.08■□□□□ 0.49
Shank1-203ENSMUST00000107938 Mier3Q3UHF3 551 aa18.08■□□□□ 0.49
Shank1-203ENSMUST00000107938 Ccdc150Q8CDI7 1110 aa18.08■□□□□ 0.48
Shank1-203ENSMUST00000107938 Vps18Q8R307 973 aa18.08■□□□□ 0.48
Shank1-203ENSMUST00000107938 Tmc1Q8R4P5 757 aa18.08■□□□□ 0.48
Shank1-203ENSMUST00000107938 Atp2a2O55143 1044 aaKnown RBP18.08■□□□□ 0.48
Shank1-203ENSMUST00000107938 Hmox1P14901 289 aa18.08■□□□□ 0.48
Shank1-203ENSMUST00000107938 Cog7Q3UM29 770 aa18.08■□□□□ 0.48
Shank1-203ENSMUST00000107938 Ndufab1Q9CR21 156 aa18.08■□□□□ 0.48
Shank1-203ENSMUST00000107938 Gm21190A0A0G2JGJ6 266 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Atad3Q925I1 591 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Ube3aO08759 870 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Tagap1P0CAX8 505 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Tsg101Q61187 391 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Fgfr1opQ66JX5 399 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Rabgap1A2AWA9 1064 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Cracr2aQ3UP38 310 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Mybbp1aQ7TPV4 1344 aaKnown RBP18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Gnai1B2RSH2 354 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Gnai3Q9DC51 354 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Rlbp1Q9Z275 317 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Maml3D4QGC2 1135 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Zfp42P22227 288 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Ano10Q8BH79 659 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Zbtb12Q9Z150 459 aa18.07■□□□□ 0.48
Shank1-203ENSMUST00000107938 Gng11P61953 73 aa18.06■□□□□ 0.48
Shank1-203ENSMUST00000107938 Caprin2Q05A80 1031 aaKnown RBP18.06■□□□□ 0.48
Shank1-203ENSMUST00000107938 Cc2d1aQ8K1A6 943 aa18.06■□□□□ 0.48
Shank1-203ENSMUST00000107938 Diaph2O70566 1098 aa18.06■□□□□ 0.48
Shank1-203ENSMUST00000107938 Hdhd2Q3UGR5 259 aa18.06■□□□□ 0.48
Shank1-203ENSMUST00000107938 Q8R1Y2 203 aa18.06■□□□□ 0.48
Shank1-203ENSMUST00000107938 Zfp597E9Q6S0 419 aa18.06■□□□□ 0.48
Shank1-203ENSMUST00000107938 Eps15P42567 897 aa18.06■□□□□ 0.48
Shank1-203ENSMUST00000107938 Hdac9Q99N13 588 aa18.06■□□□□ 0.48
Shank1-203ENSMUST00000107938 Samm50Q8BGH2 469 aa18.06■□□□□ 0.48
Shank1-203ENSMUST00000107938 Arhgef6Q8K4I3 771 aa18.05■□□□□ 0.48
Shank1-203ENSMUST00000107938 Prl7d1P04769 244 aa18.05■□□□□ 0.48
Shank1-203ENSMUST00000107938 Psmc4P54775 418 aa18.05■□□□□ 0.48
Shank1-203ENSMUST00000107938 Ppfibp1Q8C8U0 969 aaKnown RBP18.05■□□□□ 0.48
Shank1-203ENSMUST00000107938 Srcin1Q9QWI6 1250 aa18.05■□□□□ 0.48
Shank1-203ENSMUST00000107938 Ppp1r12cQ3UMT1 782 aa18.05■□□□□ 0.48
Shank1-203ENSMUST00000107938 Trim7Q923T7 510 aa18.05■□□□□ 0.48
Shank1-203ENSMUST00000107938 Pcyt1aP49586 367 aa18.05■□□□□ 0.48
Shank1-203ENSMUST00000107938 Cep85lA0A1W2P884 806 aa18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 Tsen2Q6P7W5 460 aa18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 Rufy2Q8R4C2 606 aa18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 Dcaf11Q91VU6 549 aa18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 Olr1Q9EQ09 363 aa18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 VeztQ3ZK22 780 aa18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 Taok1Q5F2E8 1001 aa18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 Rai14Q9EP71 979 aaKnown RBP18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 GfapP03995 430 aa18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 Ccdc66Q6NS45 935 aa18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 Usp47Q8BY87 1376 aa18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 Zmynd8A2A484 1235 aaKnown RBP18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 Strn4P58404 760 aa18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 Yeats4Q9CR11 227 aaKnown RBP18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 Ccdc175E9PVB3 822 aa18.04■□□□□ 0.48
Shank1-203ENSMUST00000107938 LnpkQ7TQ95 425 aa18.03■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms