RNA–Protein interactions for RNA: ENSMUST00000101616.8

Smarca1-203, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca1, Length 3,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-203ENSMUST00000101616 Zkscan4Q5SZT6 480 aa9.73□□□□□ -0.85
Smarca1-203ENSMUST00000101616 TatQ8QZR1 454 aa9.73□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Zap70P43404 618 aa9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Agtpbp1Q641K1 1218 aa9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Frat2Q8K025 231 aa9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Bloc1s2Q9CWG9 143 aa9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Mrps25Q9D125 171 aaKnown RBP9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Odf2lQ9D478 642 aa9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Mlh1Q9JK91 760 aa9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Gm14025A2AP89 1413 aa9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 IbtkQ6ZPR6 1352 aaKnown RBP9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Znf653Q6YND2 615 aa9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Rufy2Q8R4C2 606 aa9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Tubb6Q922F4 447 aa9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Sos1Q62245 1319 aa9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Elp1Q7TT37 1333 aaKnown RBP9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Zfp51Q3U4L8 781 aa9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Kri1Q8VDQ9 704 aaKnown RBP9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Elf2Q9JHC9 593 aa9.72□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Fam135bQ9DAI6 1403 aa9.71□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Rbm8a2A0A0N4SUH6 174 aa9.71□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Cct4P80315 539 aaKnown RBP9.71□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Fam107bQ3TGF2 131 aa9.71□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Limch1Q3UH68 1057 aa9.71□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Ccdc158Q8CDI6 1109 aa9.71□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Rbm8aQ9CWZ3 174 aa9.71□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Zkscan5Q9Z1D8 819 aa9.71□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Ppip5k1A2ARP1 1436 aa9.71□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Urb2E9Q7L1 1524 aaKnown RBP9.71□□□□□ -0.85
Smarca1-203ENSMUST00000101616 Prim1P20664 417 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Chpf2Q3UU43 768 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ano1Q8BHY3 960 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ccdc73Q8CDM4 1066 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Paf1Q8K2T8 535 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Fam76aQ922G2 307 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 BC005561E9Q5E2 1589 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ankrd50F7BE84 1390 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ktn1Q61595 1327 aaKnown RBP9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ppp1r15aP17564 657 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Kif2aP28740 705 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Gsdma3Q5Y4Y6 464 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Hand2Q61039 217 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Nrbp1Q99J45 535 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Lonp2Q9DBN5 852 aa9.71□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ppfia1B2RXQ2 1266 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 CalrP14211 416 aaKnown RBP9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ankrd40Q5SUE8 363 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 PsapQ61207 557 aaKnown RBP9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Fsd2Q8BZ52 692 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Smc2Q8CG48 1191 aaKnown RBP9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Tbc1d7Q9D0K0 293 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Cdc45Q9Z1X9 566 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Crocc2F6XLV1 1638 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Adamts12Q811B3 1600 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Adgrb2Q8CGM1 1561 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Pafah1b1P63005 410 aaKnown RBP9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Cep120Q7TSG1 988 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ercc6lQ8BHK9 1240 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Phldb2Q8K1N2 1249 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Srgap1Q91Z69 1062 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Evi5lH3BKQ3 813 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Psmb7P70195 277 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 HmmrQ00547 794 aaKnown RBP9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Atp2b3Q0VF55 1220 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Erich4Q3UNU4 136 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Tti2Q8BGV4 512 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Vps37cQ8R105 352 aa9.7□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Atg4a-psA0A0G2JFS9 396 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Kif3cO35066 796 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Stat1P42225 749 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Pa2g4P50580 394 aaKnown RBP9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Tmem67Q8BR76 992 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Atg4aQ8C9S8 396 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Vps53Q8CCB4 832 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Znf131Q8K3J5 619 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Trim29Q8R2Q0 587 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Pik3r4Q8VD65 1358 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Btn2a2A4QPC6 514 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Mknk2Q8CDB0 459 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Atf7Q8R0S1 413 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Rrs1Q9CYH6 365 aaKnown RBP9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Bag3Q9JLV1 577 aaKnown RBP9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Smarcc1P97496 1104 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Pdlim2Q8R1G6 349 aa9.69□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Znf568E9PYI1 671 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ubash3aQ3V3E1 624 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Sycp1Q62209 993 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Atp1a2Q6PIE5 1020 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Rassf4Q8CB96 322 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Iqca1Q9CUL5 857 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ccdc112A0AUP1 442 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Tpx2A2APB8 745 aaKnown RBP9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ccdc162pQ0VG85 912 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Necab1Q8BG18 352 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Tango6Q8C3S2 1079 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 HnrnpmQ9D0E1 729 aaKnown RBP9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Nsd3Q6P2L6 1439 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 GmnnO88513 206 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 Ccne1Q61457 408 aa9.68□□□□□ -0.86
Smarca1-203ENSMUST00000101616 March6Q6ZQ89 909 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms