RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Atp1a4Q9WV27 1032 aa11.86□□□□□ -0.51
Lig4-201ENSMUST00000095476 Top2bQ64511 1612 aa11.86□□□□□ -0.51
Lig4-201ENSMUST00000095476 Btn2a2A4QPC6 514 aa11.86□□□□□ -0.51
Lig4-201ENSMUST00000095476 Syt1P46096 421 aa11.86□□□□□ -0.51
Lig4-201ENSMUST00000095476 Ankrd24Q80VM7 985 aa11.86□□□□□ -0.51
Lig4-201ENSMUST00000095476 Lmbr1Q9JIT0 490 aa11.86□□□□□ -0.51
Lig4-201ENSMUST00000095476 Irf5P56477 497 aa11.86□□□□□ -0.51
Lig4-201ENSMUST00000095476 Skor1Q8BX46 964 aa11.86□□□□□ -0.51
Lig4-201ENSMUST00000095476 Vps53Q8CCB4 832 aa11.86□□□□□ -0.51
Lig4-201ENSMUST00000095476 Rai14Q9EP71 979 aaKnown RBP11.86□□□□□ -0.51
Lig4-201ENSMUST00000095476 Tshz2Q68FE9 1030 aa11.85□□□□□ -0.51
Lig4-201ENSMUST00000095476 Fam13aQ8BGI4 693 aa11.85□□□□□ -0.51
Lig4-201ENSMUST00000095476 RalylQ8BTF8 293 aa11.85□□□□□ -0.51
Lig4-201ENSMUST00000095476 Noc3lQ8VI84 807 aaKnown RBP11.85□□□□□ -0.51
Lig4-201ENSMUST00000095476 AU019823E9PUQ3 292 aa11.85□□□□□ -0.51
Lig4-201ENSMUST00000095476 Aldh8a1Q8BH00 487 aa11.85□□□□□ -0.51
Lig4-201ENSMUST00000095476 Mis12Q9CY25 206 aa11.85□□□□□ -0.51
Lig4-201ENSMUST00000095476 Fam135bQ9DAI6 1403 aa11.85□□□□□ -0.51
Lig4-201ENSMUST00000095476 Rsph4aQ8BYM7 716 aa11.85□□□□□ -0.51
Lig4-201ENSMUST00000095476 Smco2Q9DA21 347 aa11.85□□□□□ -0.51
Lig4-201ENSMUST00000095476 Mybbp1aQ7TPV4 1344 aaKnown RBP11.85□□□□□ -0.51
Lig4-201ENSMUST00000095476 Kiaa1211Q5PR69 1207 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 Ncapg2Q6DFV1 1138 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 Smarcc2Q6PDG5 1213 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 Ncapd2Q8K2Z4 1392 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 MpripP97434 1024 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 Q4VA45 678 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 Akap8Q9DBR0 687 aaKnown RBP11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 Fbxo3Q9DC63 480 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 Aplp1Q03157 653 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 IqcgQ80W32 419 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 Ccdc150Q8CDI7 1110 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 Ripk4Q9ERK0 786 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 Gm21190A0A0G2JGJ6 266 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 Plekhd1B2RPU2 505 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 Esyt1Q3U7R1 1092 aaKnown RBP11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 TxlnaQ6PAM1 554 aaKnown RBP11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 Erc1Q99MI1 1120 aa11.84□□□□□ -0.51
Lig4-201ENSMUST00000095476 CadpsQ80TJ1 1355 aa11.83□□□□□ -0.51
Lig4-201ENSMUST00000095476 Pip4k2bQ80XI4 416 aa11.83□□□□□ -0.52
Lig4-201ENSMUST00000095476 Trim11Q99PQ2 467 aa11.83□□□□□ -0.52
Lig4-201ENSMUST00000095476 FanclQ9CR14 375 aa11.83□□□□□ -0.52
Lig4-201ENSMUST00000095476 Armc9Q9D2I5 817 aa11.83□□□□□ -0.52
Lig4-201ENSMUST00000095476 Slx4ipQ9D7Y9 413 aa11.83□□□□□ -0.52
Lig4-201ENSMUST00000095476 RalgapbQ8BQZ4 1484 aa11.83□□□□□ -0.52
Lig4-201ENSMUST00000095476 IbtkQ6ZPR6 1352 aaKnown RBP11.83□□□□□ -0.52
Lig4-201ENSMUST00000095476 Rlbp1Q9Z275 317 aa11.83□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ccdc112A0AUP1 442 aa11.83□□□□□ -0.52
Lig4-201ENSMUST00000095476 Gm156Q58A37 223 aa11.83□□□□□ -0.52
Lig4-201ENSMUST00000095476 Tshz1Q5DTH5 1084 aa11.83□□□□□ -0.52
Lig4-201ENSMUST00000095476 Sdad1Q80UZ2 687 aaKnown RBP11.83□□□□□ -0.52
Lig4-201ENSMUST00000095476 Naa15Q80UM3 865 aaKnown RBP11.83□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ddx49Q4FZF3 480 aaKnown RBP11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Fsd2Q8BZ52 692 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Chmp7Q8R1T1 451 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 MycbpQ9EQS3 103 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Elf2Q9JHC9 593 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 AqrQ8CFQ3 1481 aaKnown RBP11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Bcl2l13P59017 434 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Brd2Q7JJ13 798 aaKnown RBP11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Map3k11Q80XI6 850 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 HypkQ9CR41 129 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Nsfl1cQ9CZ44 370 aaKnown RBP11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Pik3r4Q8VD65 1358 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 PsapQ61207 557 aaKnown RBP11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Agtpbp1Q641K1 1218 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Cyp27a1Q9DBG1 533 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Abcc5Q9R1X5 1436 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Gm21680A0A0G2JGR8 267 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Map7d1A2AJI0 846 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Mctp2Q5RJH2 878 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ggnbp2Q5SV77 696 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 Polr3dQ91WD1 398 aa11.82□□□□□ -0.52
Lig4-201ENSMUST00000095476 LyarQ08288 388 aaKnown RBP11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ccdc57Q6PHN1 1016 aa11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Atf7Q8R0S1 413 aa11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Wasf1Q8R5H6 559 aa11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Cyp26c1B2RXA7 518 aa11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Nol11Q8BJW5 723 aaKnown RBP11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Tmx1Q8VBT0 278 aa11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Mrpl44Q9CY73 333 aaKnown RBP11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Mtx1P47802 317 aa11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ankib1Q6ZPS6 1085 aa11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Fam177a1Q8BR63 207 aa11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Smc1aQ9CU62 1233 aaKnown RBP11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Gm14025A2AP89 1413 aa11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ppfibp2O35711 882 aa11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Tacc1Q6Y685 774 aa11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 PpanQ91YU8 470 aaKnown RBP11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Six6os1Q9CTN5 574 aa11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ebag9Q9D0V7 213 aa11.81□□□□□ -0.52
Lig4-201ENSMUST00000095476 Stat1P42225 749 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Igsf3Q6ZQA6 1194 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Cep120Q7TSG1 988 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Rab3il1Q8VDV3 383 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Brms1Q99N20 246 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Antxr1Q9CZ52 562 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Cfap53Q9D439 514 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Baiap2l1Q9DBJ3 514 aa11.8□□□□□ -0.52
Lig4-201ENSMUST00000095476 Ndufa8Q9DCJ5 172 aa11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms