RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Upf2A2AT37 1269 aaKnown RBP23.73■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Gigyf1Q99MR1 1044 aaKnown RBP23.73■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Trim26Q99PN3 545 aa23.73■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Atp1b3P97370 278 aa23.72■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Morc2aQ69ZX6 1030 aa23.72■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Slc39a6Q8C145 765 aa23.72■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Ccdc60Q8C4J0 545 aa23.72■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Amhr2Q8K592 568 aa23.72■■□□□ 1.39
Vti1b-201ENSMUST00000055262 KarsQ99MN1 595 aaKnown RBP23.72■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Kcnq2Q9Z351 759 aa23.72■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Gm6268A2A3U9 297 aa23.71■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Strn4P58404 760 aa23.71■■□□□ 1.39
Vti1b-201ENSMUST00000055262 Srp68Q8BMA6 625 aaKnown RBP23.7■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Cnksr1A2A9K7 700 aa23.69■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Tlr8P58682 1032 aa23.69■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Prom2Q3UUY6 835 aa23.69■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Cavin2Q63918 418 aaKnown RBP23.69■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Polr3glQ8R0C0 218 aa23.69■■□□□ 1.38
Vti1b-201ENSMUST00000055262 CpzQ8R4V4 654 aa23.69■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Mtfr1lQ9CWE0 289 aa23.69■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Chl1P70232 1209 aa23.68■■□□□ 1.38
Vti1b-201ENSMUST00000055262 SympkQ80X82 1284 aa23.68■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Nsfl1cQ9CZ44 370 aaKnown RBP23.68■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Trip6Q9Z1Y4 480 aa23.68■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Plch1Q4KWH5 1682 aa23.68■■□□□ 1.38
Vti1b-201ENSMUST00000055262 L3mbtl2P59178 703 aa23.68■■□□□ 1.38
Vti1b-201ENSMUST00000055262 G3bp1P97855 465 aaKnown RBP23.68■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Ubxn2bQ0KL01 331 aa23.68■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Prr5lA2AVJ5 370 aa23.67■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Erbb4Q61527 1308 aa23.66■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Lrp5Q91VN0 1614 aa23.66■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Eif5bQ05D44 1216 aaKnown RBP23.66■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Ppm1fQ8CGA0 452 aa23.66■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Plekhm2Q80TQ5 1018 aa23.65■■□□□ 1.38
Vti1b-201ENSMUST00000055262 Prr29B1ARI9 187 aa23.63■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Zswim8Q3UHH1 1832 aaKnown RBP23.62■■□□□ 1.37
Vti1b-201ENSMUST00000055262 1810065E05RikQ5NC41 235 aa23.62■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Esco1Q69Z69 843 aa23.62■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Trim52Q8CDV4 233 aa23.62■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Ddx60E9PZQ1 1711 aa23.62■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Sv2bQ8BG39 683 aa23.62■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Dpf1Q9QX66 387 aa23.62■■□□□ 1.37
Vti1b-201ENSMUST00000055262 CoilQ5SU73 570 aa23.61■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Tktl2Q9D4D4 627 aa23.61■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Rbm26Q6NZN0 1012 aaKnown RBP23.6■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Slf2Q6P9P0 1278 aa23.6■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Hirip3Q8BLH7 601 aa23.6■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Rwdd1Q9CQK7 243 aa23.6■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Igfbp6P47880 238 aa23.59■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Ubn2Q80WC1 1314 aa23.58■■□□□ 1.37
Vti1b-201ENSMUST00000055262 MarsQ68FL6 902 aaKnown RBP23.58■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Znrd1-asQ8R0E5 213 aa23.58■■□□□ 1.37
Vti1b-201ENSMUST00000055262 Tmco5bQ80X59 307 aa23.57■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Lama4P97927 1816 aa23.57■■□□□ 1.36
Vti1b-201ENSMUST00000055262 ScaperF8VQ70 1398 aaKnown RBP23.57■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Ttll7A4Q9F0 912 aa23.56■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Snai1Q02085 264 aa23.56■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Fam83gQ5SWY7 812 aa23.56■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Rad23bP54728 416 aa23.56■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Magea6O89010 325 aa23.55■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Magea3Q6T340 320 aa23.55■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Nlrp3Q8R4B8 1033 aa23.55■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Echdc1Q9D9V3 322 aa23.55■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Nectin2P32507 530 aa23.54■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Wdhd1P59328 1117 aa23.54■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Gnl3lQ6PGG6 577 aaKnown RBP23.54■■□□□ 1.36
Vti1b-201ENSMUST00000055262 NgdnQ9DB96 315 aaKnown RBP23.54■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Usp21Q9QZL6 566 aa23.54■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Ssc5dQ8BV57 1371 aa23.53■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Sipa1l3G3X9J0 1776 aa23.53■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Togaram1Q6A070 1776 aaKnown RBP23.53■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Ifit1bl2Q3U687 466 aa23.53■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Ankle2Q6P1H6 964 aa23.53■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Slurp2P0DP59 97 aa23.52■■□□□ 1.36
Vti1b-201ENSMUST00000055262 Hspa2P17156 633 aa23.51■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Adam1aQ60813 791 aa23.51■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Irf9Q61179 399 aa23.51■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Flt4P35917 1363 aa23.51■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Rangap1P46061 589 aaKnown RBP23.5■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Aplp1Q03157 653 aa23.5■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Q3UPC7 1272 aa23.5■■□□□ 1.35
Vti1b-201ENSMUST00000055262 SowahdQ8BY98 327 aa23.5■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Egfem1Q8C088 590 aa23.49■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Aldh1l1Q8R0Y6 902 aa23.49■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Disp3A3KFU9 1347 aa23.48■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Cyp2d11P24457 504 aa23.48■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Ric3Q8BPM6 367 aa23.48■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Apbb1Q9QXJ1 710 aa23.48■■□□□ 1.35
Vti1b-201ENSMUST00000055262 StrcQ8VIM6 1809 aa23.46■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Prdm11A2AGX3 565 aa23.46■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Arid3aQ62431 601 aa23.46■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Mapk8ip1Q9WVI9 707 aa23.46■■□□□ 1.35
Vti1b-201ENSMUST00000055262 Cyp2c23E9Q5K4 494 aa23.45■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Aifm3Q3TY86 605 aa23.45■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Cyp2c67Q569X9 491 aa23.45■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Trim58Q5NCC9 485 aa23.45■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Mrps5Q99N87 432 aaKnown RBP23.45■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Trim34aQ99PP6 485 aa23.45■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Zbtb40Q6PCS8 1258 aa23.44■■□□□ 1.34
Vti1b-201ENSMUST00000055262 Stox1B2RQL2 990 aa23.43■■□□□ 1.34
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms