RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Rbm33Q9CXK9 1231 aaKnown RBP12.38□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Kif1bQ60575 1816 aaKnown RBP12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Capn2O08529 700 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Il4rP16382 810 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Smarcc2Q6PDG5 1213 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Ccdc162pQ0VG85 912 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 TefQ9JLC6 301 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Catsper2A2ARP9 588 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 EsrrbQ61539 433 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Ctage5Q8R311 779 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Trim11Q99PQ2 467 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Unc13aQ4KUS2 1712 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Ptpdc1Q6NZK8 747 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Akap8Q9DBR0 687 aaKnown RBP12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Gbp2Q9Z0E6 589 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Oas2E9Q9A9 742 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Gjb2Q00977 226 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Top1Q04750 767 aaKnown RBP12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 CadpsQ80TJ1 1355 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 TatQ8QZR1 454 aa12.37□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Mtmr3Q8K296 1196 aa12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Fgd6Q69ZL1 1399 aa12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Sh3bp1P55194 680 aa12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Tshz1Q5DTH5 1084 aa12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Ccdc148Q6P5U8 527 aa12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Fmnl3Q6ZPF4 1028 aa12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Sdad1Q80UZ2 687 aaKnown RBP12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Q9D9H8 365 aa12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Fam135bQ9DAI6 1403 aa12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Cct4P80315 539 aaKnown RBP12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Lmo7E9PYF4 1699 aaKnown RBP12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Kif21bQ9QXL1 1668 aa12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Opa1P58281 960 aa12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 StambpQ9CQ26 424 aa12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 LlphQ9D945 130 aaKnown RBP12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Rbm28Q8CGC6 750 aaKnown RBP12.36□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Commd10Q8JZY2 202 aa12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Slc52a2Q9D8F3 450 aa12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Cdc37l1Q9CZP7 335 aa12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Aimp1P31230 310 aaKnown RBP12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Cep131Q62036 1060 aa12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Cul9Q80TT8 1865 aa12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Trak2Q6P9N8 913 aa12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Mrps27Q8BK72 415 aaKnown RBP12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Tnip1Q9WUU8 647 aa12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 EvcP57680 1005 aa12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Ccdc66Q6NS45 935 aa12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Naa25Q8BWZ3 972 aa12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Tmc2Q8R4P4 888 aa12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Bloc1s2Q9CWG9 143 aa12.35□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Gbp8Q2V6D6 525 aa12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Gimap6Q8K349 305 aa12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 SncbQ91ZZ3 133 aa12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Ddx49Q4FZF3 480 aaKnown RBP12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Gm44503E9PYU5 387 aa12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 U2af2P26369 475 aaKnown RBP12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Ebag9Q9D0V7 213 aa12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Akap2O54931 893 aa12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Stmn4P63042 189 aa12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Kif5bQ61768 963 aa12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Cdk19Q8BWD8 501 aa12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Mlh3A0A1Y7VMP7 1443 aa12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Prl7d1P04769 244 aa12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Tax1bp1Q3UKC1 814 aaKnown RBP12.34□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Gm28510A0A087WP28 240 aa12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Tubb2aQ7TMM9 445 aa12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Gbp9Q8BTS3 619 aa12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Tubb2bQ9CWF2 445 aa12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Ppfibp1Q8C8U0 969 aaKnown RBP12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Ccdc42Q5SV66 316 aa12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Arhgef12Q8R4H2 1543 aaKnown RBP12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Trerf1Q8BXJ2 1205 aa12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Ncapd2Q8K2Z4 1392 aa12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Thoc2B1AZI6 1594 aaKnown RBP12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Fbf1A2A870 1173 aa12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Atp6v1aP50516 617 aaKnown RBP12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Eif3j1Q3UGC7 261 aaKnown RBP12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Eif3j2Q66JS6 263 aa12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Tacc1Q6Y685 774 aa12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 4930548H24RikQ9D496 437 aa12.33□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Specc1lQ2KN98 1118 aaKnown RBP12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Cplx4Q80WM3 160 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Syt10Q9R0N4 523 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Grin2aP35436 1464 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Pik3r4Q8VD65 1358 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Tyro3P55144 880 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Snx13Q6PHS6 957 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Srgap1Q91Z69 1062 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Cabp2Q9JLK4 216 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Atp1a4Q9WV27 1032 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Zfp597E9Q6S0 419 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Cwc27Q3TKY6 469 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Zpr1Q62384 459 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Rab3il1Q8VDV3 383 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Iffo1Q8BXL9 562 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Irgm2A0A140LIF8 407 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Syt1P46096 421 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Kiaa1211Q5PR69 1207 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Cep89Q9CZX2 791 aa12.32□□□□□ -0.44
Nipbl-201ENSMUST00000052965 Stard3nlQ9DCI3 235 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 95.2 ms