RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Nphp3Q7TNH6 1325 aa20.42■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Limch1Q3UH68 1057 aa20.41■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Znf653Q6YND2 615 aa20.41■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Tspyl3Q3UYP3 334 aa20.41■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Tacc1Q6Y685 774 aa20.41■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Frmpd2A0A140LI67 1392 aa20.41■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Mctp2Q5RJH2 878 aa20.41■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Ncapg2Q6DFV1 1138 aa20.41■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Arhgef18Q6P9R4 1021 aa20.41■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Jakmip2D3YXK0 820 aa20.41■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Zbtb21E9Q444 1094 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Rbm26Q6NZN0 1012 aaKnown RBP20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Bag4Q8CI61 457 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Gm1043A0A140LJC2 1431 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 SynmQ70IV5 1561 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Tmc2Q8R4P4 888 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Plekho1Q9JIY0 408 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Smtnl1Q99LM3 459 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Tmod2Q9JKK7 351 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Atp10dQ8K2X1 1416 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Zc3h12cQ5DTV4 884 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Rnf34Q99KR6 376 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Polr3aB2RXC6 1390 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Nap1l2P51860 460 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Jade2Q6ZQF7 829 aa20.4■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Trim25Q61510 634 aaKnown RBP20.39■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Rapgef3Q8VCC8 918 aa20.39■□□□□ 0.86
Pcdhac2-201ENSMUST00000047479 Camsap1A2AHC3 1581 aa20.39■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Cavin1O54724 392 aa20.39■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Tbc1d2bQ3U0J8 965 aa20.39■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Rbm19Q8R3C6 952 aaKnown RBP20.39■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Mlh3A0A1Y7VMP7 1443 aa20.39■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Tmem94Q7TSH8 1360 aa20.39■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Api5O35841 504 aaKnown RBP20.39■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Ift57Q8BXG3 429 aa20.38■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Epb41l3Q9WV92 929 aa20.38■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Ddx10Q80Y44 875 aaKnown RBP20.38■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Ddx19aQ61655 478 aaKnown RBP20.38■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 MicalclQ9D5U9 680 aa20.38■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Dydc1Q9D9T0 175 aa20.38■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Gm7347D3YYI9 267 aa20.37■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Speer4aF8VPX6 267 aa20.37■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Gimap8Q75N62 688 aa20.37■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 St5Q924W7 1134 aa20.37■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Zbtb22Q9Z0G7 638 aa20.37■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Otud6bQ8K2H2 294 aa20.37■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Luzp1Q8R4U7 1068 aaKnown RBP20.37■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Pcf11G3X9Z4 1553 aa20.37■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Ncf1Q09014 390 aa20.37■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Hand2Q61039 217 aa20.36■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Stx8O88983 236 aa20.36■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Gapvd1Q6PAR5 1458 aa20.36■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Kdm3aQ6PCM1 1323 aa20.35■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Phf14Q9D4H9 881 aa20.35■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 AI481877A2ALV5 1481 aa20.35■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 AqrQ8CFQ3 1481 aaKnown RBP20.35■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Mcm3P25206 812 aaKnown RBP20.35■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Echdc1Q9D9V3 322 aa20.35■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Grin2aP35436 1464 aa20.35■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Dph6Q9CQ28 267 aa20.35■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 L3mbtl2P59178 703 aa20.34■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Terf1P70371 421 aa20.34■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Cep120Q7TSG1 988 aa20.34■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Rnf187Q8BFX1 236 aa20.34■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 LyarQ08288 388 aaKnown RBP20.34■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Tmem132eQ6IEE6 982 aa20.34■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Camsap2Q8C1B1 1461 aa20.34■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Efcab2Q9CQ46 164 aa20.34■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Lman1Q9D0F3 517 aa20.34■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Myo1bP46735 1107 aa20.33■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Ampd3O08739 766 aa20.33■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Serpina10Q8R121 448 aa20.33■□□□□ 0.85
Pcdhac2-201ENSMUST00000047479 Gps2Q921N8 327 aa20.33■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Ccdc158Q8CDI6 1109 aa20.33■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Sdc2P43407 202 aa20.32■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Zbtb3Q91X45 518 aa20.32■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Metap2O08663 478 aaKnown RBP20.32■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Triml1Q8BVP1 470 aa20.32■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Zap70P43404 618 aa20.32■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Spag5Q7TME2 1165 aa20.32■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 SrrtQ99MR6 875 aaKnown RBP20.32■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Usp5P56399 858 aaKnown RBP20.31■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Ctnnbl1Q9CWL8 563 aaKnown RBP20.31■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Ccnl1Q52KE7 532 aaKnown RBP20.31■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Atf7Q8R0S1 413 aa20.31■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Cfap53Q9D439 514 aa20.31■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Homer1Q9Z2Y3 366 aa20.3■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Fam135aQ6NS59 1506 aa20.3■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 EvcP57680 1005 aa20.3■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Cers3Q1A3B0 383 aa20.3■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Ccdc66Q6NS45 935 aa20.3■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Smc5Q8CG46 1101 aaKnown RBP20.3■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Slc1a4O35874 532 aa20.29■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Cnga2Q62398 664 aa20.29■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Hs2st1Q8R3H7 356 aa20.29■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Mrpl44Q9CY73 333 aaKnown RBP20.29■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Mapkbp1Q6NS57 1503 aa20.29■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Nop53Q8BK35 484 aaKnown RBP20.29■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Krt25Q8VCW2 446 aa20.29■□□□□ 0.84
Pcdhac2-201ENSMUST00000047479 Kifc2O08672 792 aa20.29■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms