RNA–Protein interactions for RNA: ENSMUST00000042534.14

Ccdc85a-201, Transcript of Coiled-coil domain-containing protein 85A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc85a, Length 5,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85a-201ENSMUST00000042534 Rnf41Q8BH75 317 aa16.32■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Ccdc83Q9D4V3 305 aa16.32■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Wdr7Q920I9 1489 aa16.31■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Rad23bP54728 416 aa16.31■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Slc7a3P70423 618 aa16.31■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Mrpl44Q9CY73 333 aaKnown RBP16.31■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Brd1E9PZ26 1189 aaKnown RBP16.31■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 LarsQ8BMJ2 1178 aa16.31■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Slc5a1Q8C3K6 665 aa16.31■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Paf1Q8K2T8 535 aa16.31■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Trim55G3X8Y1 545 aa16.31■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Ampd3O08739 766 aa16.31■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Nkx1-2P42580 305 aa16.31■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Soga3Q6NZL0 945 aa16.31■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Elp1Q7TT37 1333 aaKnown RBP16.31■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Ccdc181Q80ZU5 509 aa16.3■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Map3k2Q61083 619 aa16.3■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Mug2P28666 1451 aa16.3■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Paxbp1P58501 919 aa16.3■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Trim25Q61510 634 aaKnown RBP16.3■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Cdca8Q8BHX3 289 aa16.3■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Nucb2P81117 420 aa16.3■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Zbtb22Q9Z0G7 638 aa16.3■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Supt6hQ62383 1726 aaKnown RBP16.3■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Kdm3aQ6PCM1 1323 aa16.29■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Tacc1Q6Y685 774 aa16.29■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 TimelessQ9R1X4 1197 aa16.29■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Peg3Q3URU2 1571 aa16.29■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Tnni2P13412 182 aa16.29■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Il1rapl2Q9ERS6 686 aa16.29■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Stat1P42225 749 aa16.29■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Ankle2Q6P1H6 964 aa16.29■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Naip6Q9JIB6 1403 aa16.29■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Kdm2bQ6P1G2 1309 aa16.29■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Trim30cD3YVI9 513 aa16.29■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Znf771Q8BJ90 317 aa16.29■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Maats1Q8BRC6 783 aa16.29■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Smtnl1Q99LM3 459 aa16.28■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Galntl5Q9D4M9 431 aa16.28■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Mcm10Q0VBD2 885 aa16.28■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Fnbp4Q6ZQ03 1031 aa16.28■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 TnnQ80Z71 1560 aa16.28■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Fam135bQ9DAI6 1403 aa16.28■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Ces1hD3Z298 562 aa16.28■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Cers3Q1A3B0 383 aa16.28■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Mmel1Q9JLI3 765 aa16.28■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Trappc8E9PWG2 1437 aa16.28■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Uri1Q3TLD5 531 aa16.28■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 TxlnaQ6PAM1 554 aaKnown RBP16.28■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Srgap1Q91Z69 1062 aa16.28■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Sbno1Q689Z5 1390 aa16.27■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Secisbp2lQ6A098 1086 aaKnown RBP16.27■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Traf3ip1Q149C2 625 aa16.27■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Ccdc158Q8CDI6 1109 aa16.27■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Tshz3Q8CGV9 1081 aa16.27■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Ccar2Q8VDP4 922 aaKnown RBP16.27■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Tsg101Q61187 391 aa16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Hspa4Q61316 841 aa16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Ltv1Q6NSQ7 470 aaKnown RBP16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Pola1P33609 1465 aa16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Myd88P22366 296 aa16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Mipol1Q9D9F8 279 aa16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Ttc21aQ8C0S4 1314 aa16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Zmym3Q9JLM4 1370 aa16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Atp8b2P98199 1209 aa16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Jade2Q6ZQF7 829 aa16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Aldh1l2Q8K009 923 aa16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 FanclQ9CR14 375 aa16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Pdia3P27773 505 aaKnown RBP16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Pde4dQ01063 747 aa16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Nup133Q8R0G9 1155 aa16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Knop1Q9Z2Q2 478 aaKnown RBP16.26■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Usp25P57080 1055 aa16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Cct2P80314 535 aaKnown RBP16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Txndc16Q7TN22 820 aa16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Jmjd4Q8BFT6 427 aa16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Golim4Q8BXA1 655 aa16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Jakmip3Q5DTN8 844 aa16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Cbx1P83917 185 aaKnown RBP16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 EappQ5BU09 281 aa16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Erich3F6QRE9 1637 aa16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 WizO88286 1684 aaKnown RBP16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Ccdc155Q80VJ8 648 aa16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Gigyf1Q99MR1 1044 aaKnown RBP16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Znf704Q9ERQ3 566 aa16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Frmpd2A0A140LI67 1392 aa16.25■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Lrrc9Q8CDN9 1456 aa16.24■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Aplp1Q03157 653 aa16.24■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Cfap157Q0VFX2 523 aa16.24■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Cfap74Q3UY96 1578 aa16.24■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Rad50P70388 1312 aa16.24■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Gbp4Q61107 620 aa16.24■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Fam43aQ8BUP8 424 aa16.24■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Cwc25Q9DBF7 416 aa16.24■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Api5O35841 504 aaKnown RBP16.24■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Snw1Q9CSN1 536 aaKnown RBP16.24■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Ssh2Q5SW75 1423 aa16.23■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Catsper2A2ARP9 588 aa16.23■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Tspyl3Q3UYP3 334 aa16.23■□□□□ 0.19
Ccdc85a-201ENSMUST00000042534 Cep120Q7TSG1 988 aa16.23■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms