RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Stk3Q9JI10 497 aa10.43□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Nucb1Q02819 459 aaKnown RBP10.42□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Bicc1Q99MQ1 977 aaKnown RBP10.42□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 CenppQ9CZ92 286 aa10.42□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Echdc1Q9D9V3 322 aa10.42□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Wnk3Q80XP9 1757 aa10.42□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Gm21680A0A0G2JGR8 267 aa10.42□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Cgnl1Q6AW69 1298 aa10.42□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Brwd3A2AHJ4 1799 aa10.41□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 4933416C03RikQ3V063 378 aa10.41□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Ppip5k2Q6ZQB6 1129 aa10.41□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Zfp142G5E869 1843 aa10.41□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Gm10093D3YYI8 482 aa10.41□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Hdac1O09106 482 aaKnown RBP10.41□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 NmiO35309 314 aa10.41□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 EspnlQ3UYR4 1005 aa10.41□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Irf9Q61179 399 aa10.41□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Lmbr1lQ9D1E5 489 aa10.41□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Flt4P35917 1363 aa10.4□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 EngaseQ8BX80 734 aa10.4□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Tns2Q8CGB6 1400 aa10.4□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Stk36Q69ZM6 1316 aa10.4□□□□□ -0.74
Ptchd1-201ENSMUST00000038665 Mcmdc2E9Q956 681 aa10.39□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Hsp90b1P08113 802 aaKnown RBP10.39□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 4930504O13RikQ8C5Z9 145 aa10.39□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Ints5Q8CHT3 1018 aa10.39□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Efcab2Q9CQ46 164 aa10.39□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Zpr1Q62384 459 aa10.39□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Taf7Q9R1C0 341 aa10.39□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Adam1aQ60813 791 aa10.38□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Slc5a1Q8C3K6 665 aa10.38□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Ddx54Q8K4L0 874 aaKnown RBP10.38□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Iqsec3Q3TES0 1195 aa10.38□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Unc5clQ6R653 518 aa10.38□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Dhx38Q80X98 1228 aa10.38□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Fam84aQ9D650 292 aa10.38□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Vsig10D3YX43 558 aa10.37□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 LratQ9JI60 231 aa10.37□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 PsapQ61207 557 aaKnown RBP10.37□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Antxr1Q9CZ52 562 aa10.37□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Abca15E9PWH4 1668 aa10.37□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Adora1Q60612 326 aa10.37□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Tmem119Q8R138 280 aa10.37□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Mcm2P97310 904 aa10.36□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Igflr1Q3U4N7 345 aa10.36□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 4930572O03RikQ8C5Y0 211 aa10.36□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Mlh1Q9JK91 760 aa10.36□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 TefQ9JLC6 301 aa10.36□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Slit1Q80TR4 1531 aa10.36□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Syde2E9PUP1 1314 aa10.36□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Cdhr2E9Q7P9 1308 aa10.36□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Zkscan2G3X952 960 aa10.36□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Grm8P47743 908 aa10.36□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Ppm1mQ8BU27 406 aa10.36□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Tnks1bp1P58871 1720 aa10.35□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Zkscan16A2ALW2 728 aa10.35□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Ddit3P35639 168 aa10.35□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Zbtb3Q91X45 518 aa10.35□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Anapc15-psA0A140T8L6 141 aa10.35□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Erc2Q6PH08 957 aa10.35□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Phactr2B1AVP0 632 aa10.34□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Rtn4Q99P72 1162 aaKnown RBP10.34□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Cap2Q9CYT6 476 aa10.34□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Gdpd2Q9ESM6 539 aa10.34□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 MypnQ5DTJ9 1315 aa10.34□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 FocadA2AKG8 1798 aa10.34□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Plcb2A3KGF7 1181 aa10.34□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Fam228bQ497Q6 232 aa10.34□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Ssh1Q76I79 1042 aa10.34□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Jakmip1Q8BVL9 626 aa10.34□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 Brf1Q8CFK2 676 aa10.34□□□□□ -0.75
Ptchd1-201ENSMUST00000038665 BcorQ8CGN4 1759 aa10.33□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Brpf1B2RRD7 1212 aa10.33□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 F2rP30558 430 aa10.33□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 GpkowQ56A08 488 aa10.33□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Soga3Q6NZL0 945 aa10.33□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Tceal9Q9DD24 104 aa10.33□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Il1rapl2Q9ERS6 686 aa10.33□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Tjp1P39447 1745 aaKnown RBP10.33□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Eif3bQ8JZQ9 803 aaKnown RBP10.33□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Ccnl1Q52KE7 532 aaKnown RBP10.32□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Slfnl1Q8BHW9 410 aa10.32□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Bcl11bQ99PV8 884 aa10.32□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Atg3Q9CPX6 314 aa10.32□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Pmfbp1Q9WVQ0 1022 aa10.32□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Scaf1Q5U4C3 1256 aaKnown RBP10.32□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Cadps2Q8BYR5 1297 aa10.31□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Bloc1s4Q8VED2 215 aa10.31□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Cyp27a1Q9DBG1 533 aa10.31□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Pard3Q99NH2 1333 aa10.31□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Mst1rQ62190 1378 aa10.31□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 AceP09470 1312 aa10.31□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Nlrp9bQ66X22 1003 aa10.31□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Bcl9lQ67FY2 1494 aa10.31□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Neurod6P48986 337 aa10.31□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 DekQ7TNV0 380 aaKnown RBP10.31□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Ssfa2Q922B9 1252 aa10.31□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 HellsQ60848 821 aa10.3□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Slc26a8Q8R0C3 999 aa10.3□□□□□ -0.76
Ptchd1-201ENSMUST00000038665 Ltb4r2Q9JJL9 360 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 768.9 ms