RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Gm10093D3YYI8 482 aa11.71□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Hdac1O09106 482 aaKnown RBP11.71□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Me1P06801 572 aa11.71□□□□□ -0.54
Ldlr-201ENSMUST00000034713 4931400O07RikQ9D4M5 137 aa11.71□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Chpf2Q3UU43 768 aa11.71□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Fkbp5Q64378 456 aa11.71□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Mbd5B1AYB6 1498 aa11.7□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Mctp1E9PV86 951 aa11.7□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Dhx16G3X8X0 1044 aaKnown RBP11.7□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Cct4P80315 539 aaKnown RBP11.7□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Rbm5Q91YE7 815 aaKnown RBP11.7□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Mrvi1Q9WUX5 899 aaKnown RBP11.7□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Wdr63B2RY71 923 aa11.7□□□□□ -0.54
Ldlr-201ENSMUST00000034713 CrcpO35427 148 aa11.7□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Mum1Q6DID5 682 aa11.7□□□□□ -0.54
Ldlr-201ENSMUST00000034713 NgdnQ9DB96 315 aaKnown RBP11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Setbp1Q9Z180 1582 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Robo2Q7TPD3 1470 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 RereQ80TZ9 1558 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Jakmip2D3YXK0 820 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Q3UPC7 1272 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Ankrd44B2RXR6 993 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Ankib1Q6ZPS6 1085 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Egfem1Q8C088 590 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Ttc19Q8CC21 365 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Phldb2Q8K1N2 1249 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Nkx1-2P42580 305 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 CrklP47941 303 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Tbc1d9Q3UYK3 1264 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 ThemisQ8BGW0 636 aa11.69□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Map3k13Q1HKZ5 959 aa11.68□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Pip4k2aO70172 405 aa11.68□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Kidins220E9Q9B7 1793 aa11.68□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Ahdc1Q6PAL7 1594 aaKnown RBP11.68□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Card10P58660 1021 aa11.68□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Bag1Q60739 355 aa11.68□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Ncoa4Q5U4H9 625 aa11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Ddx58Q6Q899 926 aa11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Spag5Q7TME2 1165 aa11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Ginm1Q91WR6 327 aa11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Noc3lQ8VI84 807 aaKnown RBP11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Chaf1aQ9QWF0 911 aa11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Cdc45Q9Z1X9 566 aa11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Gm45140A0A0N4SUM8 220 aa11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Bicdl1A0JNT9 577 aa11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Scaf11E9PZM7 1456 aaKnown RBP11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Ankle2Q6P1H6 964 aa11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Samm50Q8BGH2 469 aa11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Qtrt2B8ZXI1 415 aa11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Irf9Q61179 399 aa11.67□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Tns3Q5SSZ5 1440 aa11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Duxf3A0A0N4SV92 674 aa11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Pde4bB1AWC9 736 aa11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 CalrP14211 416 aaKnown RBP11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Cep112Q5PR68 954 aa11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Def6Q8C2K1 630 aa11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Echdc1Q9D9V3 322 aa11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Cep152A2AUM9 1736 aaKnown RBP11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Cdc42bpbQ7TT50 1713 aa11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 LifrP42703 1092 aa11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Ccdc102aQ3TMW1 549 aa11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Cavin2Q63918 418 aaKnown RBP11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Kri1Q8VDQ9 704 aaKnown RBP11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 NefhP19246 1090 aa11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Prkar2bP31324 416 aa11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Ncbp3Q8BZR9 615 aaKnown RBP11.66□□□□□ -0.54
Ldlr-201ENSMUST00000034713 AdgbG3UZ78 1657 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Fam135bQ9DAI6 1403 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Rasa1E9PYG6 1038 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Prl7d1P04769 244 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Babam1Q3UI43 333 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Slu7Q8BHJ9 585 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 CenpqQ9CPQ5 267 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 UvssaQ9D479 717 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 LlphQ9D945 130 aaKnown RBP11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Txnrd1Q9JMH6 613 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Ttc37F8VPK0 1563 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 ShprhQ7TPQ3 1674 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Tex14Q7M6U3 1450 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 FosbP13346 338 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Trim28Q62318 834 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Fez2Q6TYB5 348 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Taf7Q9R1C0 341 aa11.65□□□□□ -0.54
Ldlr-201ENSMUST00000034713 Zkscan7E9PVW1 718 aa11.64□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Nucb2P81117 420 aa11.64□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Gjb2Q00977 226 aa11.64□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ddb1Q3U1J4 1140 aaKnown RBP11.64□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Cdkl5Q3UTQ8 938 aa11.64□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ccnl1Q52KE7 532 aaKnown RBP11.64□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Mrps27Q8BK72 415 aaKnown RBP11.64□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Klhdc4Q921I2 584 aa11.64□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ube2hP62257 183 aa11.64□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Lrrcc1Q69ZB0 1026 aa11.64□□□□□ -0.55
Ldlr-201ENSMUST00000034713 SelenooQ9DBC0 667 aa11.64□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Abca9Q8K449 1623 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Samd1D3YXK1 519 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Gsdma2Q32M21 443 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Erc1Q99MI1 1120 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Igbp1bQ9QZ29 343 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Kif24Q6NWW5 1356 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms