RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Myo5cE9Q1F5 1742 aa11.89□□□□□ -0.51
Copb1-201ENSMUST00000033012 Rnf17Q99MV7 1640 aa11.89□□□□□ -0.51
Copb1-201ENSMUST00000033012 Cfap58B2RW38 873 aa11.89□□□□□ -0.51
Copb1-201ENSMUST00000033012 Nol8Q3UHX0 1147 aaKnown RBP11.89□□□□□ -0.51
Copb1-201ENSMUST00000033012 Utp18Q5SSI6 552 aaKnown RBP11.89□□□□□ -0.51
Copb1-201ENSMUST00000033012 Dnaaf4Q8R368 420 aa11.89□□□□□ -0.51
Copb1-201ENSMUST00000033012 Tmx1Q8VBT0 278 aa11.89□□□□□ -0.51
Copb1-201ENSMUST00000033012 Eif2ak4Q9QZ05 1648 aa11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Cnga1P29974 684 aa11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Usp40Q8BWR4 1235 aa11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Cdk5rap2Q8K389 1822 aa11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Gm20521D3Z5F7 333 aa11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Cfdp1O88271 295 aaKnown RBP11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Trak2Q6P9N8 913 aa11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Bmp2kQ91Z96 1138 aa11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Elf2Q9JHC9 593 aa11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Stx6Q9JKK1 255 aa11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Kiaa0556Q8C753 1610 aa11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 RargP18911 458 aaKnown RBP11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Tpm4Q6IRU2 248 aa11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Igsf3Q6ZQA6 1194 aa11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Dnaaf2Q8BPI1 814 aa11.88□□□□□ -0.51
Copb1-201ENSMUST00000033012 Zfp804bA0A0G2JGH6 1343 aa11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 Cd22P35329 862 aa11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 Recql4Q75NR7 1216 aaKnown RBP11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 Cfap65Q3V0B4 1847 aa11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 Cdc42bpbQ7TT50 1713 aa11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 Zcchc11B2RX14 1644 aaKnown RBP11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 Usp32F8VPZ3 1604 aa11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 CemipQ8BI06 1361 aa11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 Vamp4O70480 141 aa11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 Tm6sf1P58749 370 aa11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 Fam13aQ8BGI4 693 aa11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 Aldh1l2Q8K009 923 aa11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 Igbp1bQ9QZ29 343 aa11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 Cdc42bpgQ80UW5 1551 aa11.87□□□□□ -0.51
Copb1-201ENSMUST00000033012 Gm32742A0A1B0GT42 1604 aa11.86□□□□□ -0.51
Copb1-201ENSMUST00000033012 Btn2a2A4QPC6 514 aa11.86□□□□□ -0.51
Copb1-201ENSMUST00000033012 FntaQ61239 377 aa11.86□□□□□ -0.51
Copb1-201ENSMUST00000033012 U2surpQ6NV83 1029 aaKnown RBP11.86□□□□□ -0.51
Copb1-201ENSMUST00000033012 Nsd2Q8BVE8 1365 aa11.86□□□□□ -0.51
Copb1-201ENSMUST00000033012 Ptch1Q61115 1434 aa11.86□□□□□ -0.51
Copb1-201ENSMUST00000033012 Map9Q3TRR0 646 aa11.86□□□□□ -0.51
Copb1-201ENSMUST00000033012 Npdc1Q64322 332 aa11.86□□□□□ -0.51
Copb1-201ENSMUST00000033012 Calcoco2A2A6M5 331 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Pdzrn3Q69ZS0 1063 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Dmrt2Q8BG36 561 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Cyp46a1Q9WVK8 500 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 InsrP15208 1372 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Sipa1l1Q8C0T5 1782 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 MecomP14404 1042 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Podxl2Q8CAE9 603 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Smarca5Q91ZW3 1051 aaKnown RBP11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 NagaQ9QWR8 415 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Dpf1Q9QX66 387 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Nos1Q9Z0J4 1429 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Atg4a-psA0A0G2JFS9 396 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Wdr3Q8BHB4 942 aaKnown RBP11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Tsen34Q8BMZ5 316 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Atg4aQ8C9S8 396 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Anapc4Q91W96 807 aa11.85□□□□□ -0.51
Copb1-201ENSMUST00000033012 Myo3aQ8K3H5 1613 aa11.84□□□□□ -0.51
Copb1-201ENSMUST00000033012 Fmnl2A2APV2 1086 aa11.84□□□□□ -0.51
Copb1-201ENSMUST00000033012 EappQ5BU09 281 aa11.84□□□□□ -0.51
Copb1-201ENSMUST00000033012 Acbd5Q5XG73 508 aa11.84□□□□□ -0.51
Copb1-201ENSMUST00000033012 Arid5bQ8BM75 1188 aaKnown RBP11.84□□□□□ -0.51
Copb1-201ENSMUST00000033012 Os9Q8K2C7 672 aa11.84□□□□□ -0.51
Copb1-201ENSMUST00000033012 Gabpb2P81069 414 aa11.84□□□□□ -0.51
Copb1-201ENSMUST00000033012 Cavin2Q63918 418 aaKnown RBP11.84□□□□□ -0.51
Copb1-201ENSMUST00000033012 Ints3Q7TPD0 1041 aaKnown RBP11.84□□□□□ -0.51
Copb1-201ENSMUST00000033012 DonsonQ9QXP4 560 aa11.84□□□□□ -0.51
Copb1-201ENSMUST00000033012 Trim55G3X8Y1 545 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Anks1aP59672 1150 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Rab11fip3Q8CHD8 1047 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Saal1Q9D2C2 474 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Zbtb22Q9Z0G7 638 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Rnaseh1O70338 285 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Ranbp1P34022 203 aaKnown RBP11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Mns1Q61884 491 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Dact1Q8R4A3 778 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Knl1Q66JQ7 1612 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Fhod1Q6P9Q4 1197 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Cct8l1Q80YT3 562 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 CrebrfQ8CDG5 640 aaKnown RBP11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 RestQ8VIG1 1082 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Q9CYI0 393 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Cep83Q9D5R3 692 aa11.83□□□□□ -0.52
Copb1-201ENSMUST00000033012 Triml2E9PW10 424 aa11.82□□□□□ -0.52
Copb1-201ENSMUST00000033012 NefhP19246 1090 aa11.82□□□□□ -0.52
Copb1-201ENSMUST00000033012 MarsQ68FL6 902 aaKnown RBP11.82□□□□□ -0.52
Copb1-201ENSMUST00000033012 Cdc37l1Q9CZP7 335 aa11.82□□□□□ -0.52
Copb1-201ENSMUST00000033012 Ktn1Q61595 1327 aaKnown RBP11.82□□□□□ -0.52
Copb1-201ENSMUST00000033012 Zkscan2G3X952 960 aa11.82□□□□□ -0.52
Copb1-201ENSMUST00000033012 Pde4cQ3UEI1 686 aa11.82□□□□□ -0.52
Copb1-201ENSMUST00000033012 Panx2Q6IMP4 677 aa11.82□□□□□ -0.52
Copb1-201ENSMUST00000033012 Ints4Q8CIM8 964 aa11.82□□□□□ -0.52
Copb1-201ENSMUST00000033012 Snw1Q9CSN1 536 aaKnown RBP11.82□□□□□ -0.52
Copb1-201ENSMUST00000033012 Smc1aQ9CU62 1233 aaKnown RBP11.82□□□□□ -0.52
Copb1-201ENSMUST00000033012 TnmdQ9EP64 317 aa11.82□□□□□ -0.52
Copb1-201ENSMUST00000033012 Kif13aQ9EQW7 1749 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms