RNA–Protein interactions for RNA: ENSMUST00000031817.9

Herc6-201, Transcript of E3 ISG15--protein ligase Herc6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Herc6, Length 4,767 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc6-201ENSMUST00000031817 Eif2ak4Q9QZ05 1648 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Grm8P47743 908 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Zc3h12cQ5DTV4 884 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Ankrd13dQ6PD24 605 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Tmc1Q8R4P5 757 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Izumo3A6PWV3 263 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Ddx19aQ61655 478 aaKnown RBP12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Necab1Q8BG18 352 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Tmem266Q8BZB3 538 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Wdr17E9Q271 1322 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Nos1Q9Z0J4 1429 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Kif21bQ9QXL1 1668 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Kif20aP97329 887 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Atp8b2P98199 1209 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 VeztQ3ZK22 780 aa12.54□□□□□ -0.4
Herc6-201ENSMUST00000031817 Lamc1P02468 1607 aaKnown RBP12.53□□□□□ -0.4
Herc6-201ENSMUST00000031817 Rnf41Q8BH75 317 aa12.53□□□□□ -0.4
Herc6-201ENSMUST00000031817 Dnajc2P54103 621 aaKnown RBP12.53□□□□□ -0.4
Herc6-201ENSMUST00000031817 Idi1P58044 227 aa12.53□□□□□ -0.4
Herc6-201ENSMUST00000031817 LifrP42703 1092 aa12.53□□□□□ -0.4
Herc6-201ENSMUST00000031817 Duxf3A0A0N4SV92 674 aa12.53□□□□□ -0.4
Herc6-201ENSMUST00000031817 Trim27Q62158 513 aa12.53□□□□□ -0.4
Herc6-201ENSMUST00000031817 Fam135bQ9DAI6 1403 aa12.52□□□□□ -0.4
Herc6-201ENSMUST00000031817 Cep55Q8BT07 462 aa12.52□□□□□ -0.4
Herc6-201ENSMUST00000031817 Kdm6bQ5NCY0 1641 aa12.52□□□□□ -0.4
Herc6-201ENSMUST00000031817 Ppp4r3aQ6P2K6 820 aa12.52□□□□□ -0.41
Herc6-201ENSMUST00000031817 Lmbr1lQ9D1E5 489 aa12.52□□□□□ -0.41
Herc6-201ENSMUST00000031817 Tbc1d9Q3UYK3 1264 aa12.52□□□□□ -0.41
Herc6-201ENSMUST00000031817 Tmem67Q8BR76 992 aa12.52□□□□□ -0.41
Herc6-201ENSMUST00000031817 Dhx8A2A4P0 1244 aaKnown RBP12.52□□□□□ -0.41
Herc6-201ENSMUST00000031817 Krt25Q8VCW2 446 aa12.52□□□□□ -0.41
Herc6-201ENSMUST00000031817 ParvgQ9ERD8 331 aa12.52□□□□□ -0.41
Herc6-201ENSMUST00000031817 Fhod3Q76LL6 1578 aa12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 Map7d2A2AG50 781 aa12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 Card10P58660 1021 aa12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 SfswapQ3USH5 945 aaKnown RBP12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 Fam213aQ9CYH2 218 aa12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 Lmbr1Q9JIT0 490 aa12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 IkQ9Z1M8 557 aaKnown RBP12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 Kcnn1Q9EQR3 537 aa12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 Hmg20bQ9Z104 317 aa12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 Mroh2aD3Z750 1679 aa12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 Znf692Q3U381 531 aa12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 Babam1Q3UI43 333 aa12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 Med4Q9CQA5 270 aa12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 Yeats2Q3TUF7 1407 aa12.51□□□□□ -0.41
Herc6-201ENSMUST00000031817 Pip4k2aO70172 405 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Tnni2P13412 182 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Ltv1Q6NSQ7 470 aaKnown RBP12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Fam160b2Q80YR2 744 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Hecw1Q8K4P8 1604 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Ttc21aQ8C0S4 1314 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Kdm6aO70546 1401 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 AU022751B1B0V2 589 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Prpf4bQ61136 1007 aaKnown RBP12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Rnf214Q8BFU3 668 aaKnown RBP12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Aldh8a1Q8BH00 487 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Ercc6lQ8BHK9 1240 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 TnmdQ9EP64 317 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Il1rapl2Q9ERS6 686 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Tex14Q7M6U3 1450 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Abcc3B2RX12 1523 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Prim1P20664 417 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Nap1l2P51860 460 aa12.5□□□□□ -0.41
Herc6-201ENSMUST00000031817 Ppfia1B2RXQ2 1266 aa12.49□□□□□ -0.41
Herc6-201ENSMUST00000031817 Ppp1r21Q3TDD9 780 aa12.49□□□□□ -0.41
Herc6-201ENSMUST00000031817 Nup88Q8CEC0 753 aaKnown RBP12.49□□□□□ -0.41
Herc6-201ENSMUST00000031817 Scaf11E9PZM7 1456 aaKnown RBP12.49□□□□□ -0.41
Herc6-201ENSMUST00000031817 Golim4Q8BXA1 655 aa12.49□□□□□ -0.41
Herc6-201ENSMUST00000031817 Pof1bQ8K4L4 587 aa12.49□□□□□ -0.41
Herc6-201ENSMUST00000031817 Atf7Q8R0S1 413 aa12.49□□□□□ -0.41
Herc6-201ENSMUST00000031817 Slc14a2Q8R4T9 930 aa12.49□□□□□ -0.41
Herc6-201ENSMUST00000031817 Zfyve16Q80U44 1528 aa12.49□□□□□ -0.41
Herc6-201ENSMUST00000031817 Morc2aQ69ZX6 1030 aa12.49□□□□□ -0.41
Herc6-201ENSMUST00000031817 Pm20d1Q8C165 503 aa12.49□□□□□ -0.41
Herc6-201ENSMUST00000031817 Cfap58B2RW38 873 aa12.48□□□□□ -0.41
Herc6-201ENSMUST00000031817 Mcmdc2E9Q956 681 aa12.48□□□□□ -0.41
Herc6-201ENSMUST00000031817 Gcom1E9PZ54 550 aa12.48□□□□□ -0.41
Herc6-201ENSMUST00000031817 Stim1P70302 685 aa12.48□□□□□ -0.41
Herc6-201ENSMUST00000031817 MyzapQ3UIJ9 466 aa12.48□□□□□ -0.41
Herc6-201ENSMUST00000031817 Egfem1Q8C088 590 aa12.48□□□□□ -0.41
Herc6-201ENSMUST00000031817 St5Q924W7 1134 aa12.48□□□□□ -0.41
Herc6-201ENSMUST00000031817 Rai14Q9EP71 979 aaKnown RBP12.48□□□□□ -0.41
Herc6-201ENSMUST00000031817 Trim28Q62318 834 aa12.47□□□□□ -0.41
Herc6-201ENSMUST00000031817 Ssh1Q76I79 1042 aa12.47□□□□□ -0.41
Herc6-201ENSMUST00000031817 Mybbp1aQ7TPV4 1344 aaKnown RBP12.47□□□□□ -0.41
Herc6-201ENSMUST00000031817 Rims1Q99NE5 1463 aa12.47□□□□□ -0.41
Herc6-201ENSMUST00000031817 Gm7347D3YYI9 267 aa12.47□□□□□ -0.41
Herc6-201ENSMUST00000031817 Speer4aF8VPX6 267 aa12.47□□□□□ -0.41
Herc6-201ENSMUST00000031817 Nup133Q8R0G9 1155 aa12.47□□□□□ -0.41
Herc6-201ENSMUST00000031817 Bcl11aQ9QYE3 773 aa12.47□□□□□ -0.41
Herc6-201ENSMUST00000031817 Tarbp1E9Q368 1579 aa12.47□□□□□ -0.41
Herc6-201ENSMUST00000031817 Ncoa4Q5U4H9 625 aa12.47□□□□□ -0.41
Herc6-201ENSMUST00000031817 Ccdc39Q9D5Y1 937 aa12.47□□□□□ -0.41
Herc6-201ENSMUST00000031817 Phkg2Q9DB30 406 aa12.47□□□□□ -0.41
Herc6-201ENSMUST00000031817 Atp2b3Q0VF55 1220 aa12.46□□□□□ -0.41
Herc6-201ENSMUST00000031817 Lrrc43Q3V0L5 667 aa12.46□□□□□ -0.41
Herc6-201ENSMUST00000031817 Limch1Q3UH68 1057 aa12.46□□□□□ -0.41
Herc6-201ENSMUST00000031817 ZwintQ9CQU5 252 aa12.46□□□□□ -0.41
Herc6-201ENSMUST00000031817 FanclQ9CR14 375 aa12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms