RNA–Protein interactions for RNA: ENSMUST00000031598.10

Ddx54-201, Transcript of ATP-dependent RNA helicase DDX54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx54, Length 4,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54-201ENSMUST00000031598 TkfcQ8VC30 578 aa13.07□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Psma5Q9Z2U1 241 aaKnown RBP13.07□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Astn2Q80Z10 1352 aa13.07□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Atg4a-psA0A0G2JFS9 396 aa13.07□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Atg4aQ8C9S8 396 aa13.07□□□□□ -0.32
Ddx54-201ENSMUST00000031598 PdcQ9QW08 244 aa13.07□□□□□ -0.32
Ddx54-201ENSMUST00000031598 NpatQ8BMA5 1420 aa13.07□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Eif2ak4Q9QZ05 1648 aa13.07□□□□□ -0.32
Ddx54-201ENSMUST00000031598 GnpatP98192 678 aa13.07□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Itsn2Q9Z0R6 1659 aa13.06□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Fam177a1Q8BR63 207 aa13.06□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Rps6ka5Q8C050 863 aa13.06□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Nop14Q8R3N1 860 aaKnown RBP13.06□□□□□ -0.32
Ddx54-201ENSMUST00000031598 RestQ8VIG1 1082 aa13.06□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Idi1P58044 227 aa13.06□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Nckap5lQ6GQX2 1323 aa13.06□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Tpm3P21107 285 aaKnown RBP13.06□□□□□ -0.32
Ddx54-201ENSMUST00000031598 U2af2P26369 475 aaKnown RBP13.06□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Kcnh5Q920E3 988 aa13.06□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Nlgn1Q99K10 843 aa13.06□□□□□ -0.32
Ddx54-201ENSMUST00000031598 ScaperF8VQ70 1398 aaKnown RBP13.06□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Eif3aP23116 1344 aaKnown RBP13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Mctp1E9PV86 951 aa13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Map3k2Q61083 619 aa13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Chaf1aQ9QWF0 911 aa13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Robo2Q7TPD3 1470 aa13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Adcy5P84309 1262 aa13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 LlphQ9D945 130 aaKnown RBP13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 TnmdQ9EP64 317 aa13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Pank2Q3U4S0 443 aa13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Mctp2Q5RJH2 878 aa13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Ctr9Q62018 1173 aaKnown RBP13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Chd1lQ9CXF7 900 aa13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Slx4ipQ9D7Y9 413 aa13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Il1rapl2Q9ERS6 686 aa13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Depdc5P61460 1591 aa13.05□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Tpm3-rs7D3Z2H9 248 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Gadd45bP22339 160 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Tm6sf1P58749 370 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Ift57Q8BXG3 429 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 NaspQ99MD9 773 aaKnown RBP13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Iqca1Q9CUL5 857 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Dydc1Q9D9T0 175 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Arhgap4B1AUY3 965 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Zkscan16A2ALW2 728 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Fam184aE9PW83 1143 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Mcmdc2E9Q956 681 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Hvcn1Q3U2S8 269 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Mrps27Q8BK72 415 aaKnown RBP13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Kdm4cQ8VCD7 1054 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 ErmnQ5EBJ4 281 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Echdc1Q9D9V3 322 aa13.04□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Prune1Q8BIW1 454 aa13.03□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Ccdc96Q9CR92 584 aa13.03□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Speer4bQ9D9F7 267 aa13.03□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Adgrb3Q80ZF8 1522 aa13.03□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Pa2g4P50580 394 aaKnown RBP13.03□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Cyp27a1Q9DBG1 533 aa13.03□□□□□ -0.32
Ddx54-201ENSMUST00000031598 SetQ9EQU5 289 aaKnown RBP13.03□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Hoxc9P09633 260 aa13.03□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Gabpb2P81069 414 aa13.03□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Zpr1Q62384 459 aa13.03□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Arhgap23Q69ZH9 1483 aa13.03□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Clasp1Q80TV8 1535 aaKnown RBP13.03□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Kidins220E9Q9B7 1793 aa13.03□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Gm21663A0A0G2JE01 267 aa13.02□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Gm7361D3Z6R1 267 aa13.02□□□□□ -0.32
Ddx54-201ENSMUST00000031598 5031410I06RikE9Q4E0 267 aa13.02□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Gm1979E9QAN3 267 aa13.02□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Gm5862K7N5V5 267 aa13.02□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Gm10220K7N660 267 aa13.02□□□□□ -0.32
Ddx54-201ENSMUST00000031598 F2rP30558 430 aa13.02□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Dnajc10Q9DC23 793 aa13.02□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Elp1Q7TT37 1333 aaKnown RBP13.02□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Synj2Q9D2G5 1434 aa13.02□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Chl1P70232 1209 aa13.02□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Mns1Q61884 491 aa13.02□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Tmx4Q8C0L0 335 aa13.02□□□□□ -0.32
Ddx54-201ENSMUST00000031598 Mmp8O70138 465 aa13.02□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Rassf4Q8CB96 322 aa13.02□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Iqgap3F8VQ29 1632 aa13.02□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Atp10aO54827 1508 aa13.02□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Tceanc2Q8R2M0 207 aa13.02□□□□□ -0.33
Ddx54-201ENSMUST00000031598 GpkowQ56A08 488 aa13.01□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Gpatch3Q8BIY1 525 aa13.01□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Tmx3Q8BXZ1 456 aa13.01□□□□□ -0.33
Ddx54-201ENSMUST00000031598 PdiltQ9DAN1 588 aa13.01□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Strn4P58404 760 aa13.01□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Irf9Q61179 399 aa13.01□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Jarid2Q62315 1234 aa13.01□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Ubxn4Q8VCH8 506 aa13.01□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Kif24Q6NWW5 1356 aa13.01□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Hoxa7P02830 229 aa13.01□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Ggt6Q6PDE7 497 aa13.01□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Zcchc11B2RX14 1644 aaKnown RBP13.01□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Tpx2A2APB8 745 aaKnown RBP13□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Ier5O89113 308 aa13□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Nup88Q8CEC0 753 aaKnown RBP13□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Pmfbp1Q9WVQ0 1022 aa13□□□□□ -0.33
Ddx54-201ENSMUST00000031598 Gm21680A0A0G2JGR8 267 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms