RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 Shank2Q80Z38 1476 aa25.35■■□□□ 1.65
Cdx1-201ENSMUST00000025521 Cct4P80315 539 aaKnown RBP25.35■■□□□ 1.65
Cdx1-201ENSMUST00000025521 Nol8Q3UHX0 1147 aaKnown RBP25.35■■□□□ 1.65
Cdx1-201ENSMUST00000025521 Map3k2Q61083 619 aa25.34■■□□□ 1.65
Cdx1-201ENSMUST00000025521 Mphosph10Q810V0 681 aaKnown RBP25.34■■□□□ 1.65
Cdx1-201ENSMUST00000025521 Tceal9Q9DD24 104 aa25.34■■□□□ 1.65
Cdx1-201ENSMUST00000025521 Cfdp1O88271 295 aaKnown RBP25.33■■□□□ 1.65
Cdx1-201ENSMUST00000025521 Ccdc155Q80VJ8 648 aa25.33■■□□□ 1.65
Cdx1-201ENSMUST00000025521 Pdia6Q922R8 440 aaKnown RBP25.33■■□□□ 1.65
Cdx1-201ENSMUST00000025521 Plekhd1B2RPU2 505 aa25.33■■□□□ 1.65
Cdx1-201ENSMUST00000025521 Mrps27Q8BK72 415 aaKnown RBP25.33■■□□□ 1.65
Cdx1-201ENSMUST00000025521 Cadps2Q8BYR5 1297 aa25.33■■□□□ 1.65
Cdx1-201ENSMUST00000025521 Nsfl1cQ9CZ44 370 aaKnown RBP25.32■■□□□ 1.64
Cdx1-201ENSMUST00000025521 Hmox1P14901 289 aa25.31■■□□□ 1.64
Cdx1-201ENSMUST00000025521 Tlr7P58681 1050 aa25.31■■□□□ 1.64
Cdx1-201ENSMUST00000025521 RgmbQ7TQ33 436 aa25.31■■□□□ 1.64
Cdx1-201ENSMUST00000025521 Rfx1P48377 963 aa25.29■■□□□ 1.64
Cdx1-201ENSMUST00000025521 Asic4Q7TNS7 539 aa25.29■■□□□ 1.64
Cdx1-201ENSMUST00000025521 Eif3bQ8JZQ9 803 aaKnown RBP25.29■■□□□ 1.64
Cdx1-201ENSMUST00000025521 TefQ9JLC6 301 aa25.29■■□□□ 1.64
Cdx1-201ENSMUST00000025521 ZgpatQ8VDM1 511 aa25.28■■□□□ 1.64
Cdx1-201ENSMUST00000025521 Abcc4E9Q236 1325 aa25.28■■□□□ 1.64
Cdx1-201ENSMUST00000025521 Bcl2l13P59017 434 aa25.28■■□□□ 1.64
Cdx1-201ENSMUST00000025521 Tpx2A2APB8 745 aaKnown RBP25.27■■□□□ 1.64
Cdx1-201ENSMUST00000025521 Tiam2Q6ZPF3 1715 aa25.27■■□□□ 1.64
Cdx1-201ENSMUST00000025521 Brinp3Q499E0 766 aa25.26■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Ppm1mQ8BU27 406 aa25.26■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Kiaa0232Q80U59 1396 aaKnown RBP25.26■■□□□ 1.63
Cdx1-201ENSMUST00000025521 HdgfP51859 237 aaKnown RBP25.26■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Marf1Q8BJ34 1730 aaKnown RBP25.25■■□□□ 1.63
Cdx1-201ENSMUST00000025521 VgfQ0VGU4 617 aa25.25■■□□□ 1.63
Cdx1-201ENSMUST00000025521 4933416C03RikQ3V063 378 aa25.25■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Slc4a10Q5DTL9 1118 aa25.25■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Casq1O09165 405 aa25.24■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Grm8P47743 908 aa25.24■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Anapc15P60007 132 aa25.24■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Slx1bQ8BX32 270 aa25.24■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Bicc1Q99MQ1 977 aaKnown RBP25.23■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Cyp27a1Q9DBG1 533 aa25.23■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Fam50bQ9WTJ8 334 aa25.23■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Tgfb1i1Q62219 461 aa25.23■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Prune1Q8BIW1 454 aa25.23■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Zkscan16A2ALW2 728 aa25.22■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Ddit3P35639 168 aa25.22■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Map3k13Q1HKZ5 959 aa25.22■■□□□ 1.63
Cdx1-201ENSMUST00000025521 Pip4k2bQ80XI4 416 aa25.22■■□□□ 1.63
Cdx1-201ENSMUST00000025521 MccE9PWI3 1003 aa25.21■■□□□ 1.63
Cdx1-201ENSMUST00000025521 PappaQ8R4K8 1624 aa25.2■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Cnnm1Q0GA42 951 aa25.2■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Zpr1Q62384 459 aa25.2■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Unc5clQ6R653 518 aa25.2■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Hsp90b1P08113 802 aaKnown RBP25.19■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Ssh1Q76I79 1042 aa25.19■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Pde3bQ61409 1100 aa25.18■■□□□ 1.62
Cdx1-201ENSMUST00000025521 DiexfQ8BTT6 772 aaKnown RBP25.18■■□□□ 1.62
Cdx1-201ENSMUST00000025521 LlphQ9D945 130 aaKnown RBP25.18■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Bcl11aQ9QYE3 773 aa25.18■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Slc5a1Q8C3K6 665 aa25.18■■□□□ 1.62
Cdx1-201ENSMUST00000025521 AnlnQ8K298 1121 aaKnown RBP25.17■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Erbb4Q61527 1308 aa25.17■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Igfbp6P47880 238 aa25.16■■□□□ 1.62
Cdx1-201ENSMUST00000025521 CalcaP70160 136 aa25.16■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Lmbr1lQ9D1E5 489 aa25.16■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Shank3Q4ACU6 1730 aa25.16■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Prkab2Q6PAM0 271 aa25.16■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Zkscan1Q8BGS3 561 aaKnown RBP25.16■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Cdhr2E9Q7P9 1308 aa25.15■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Ankle2Q6P1H6 964 aa25.15■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Zbtb3Q91X45 518 aa25.15■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Speer4bQ9D9F7 267 aa25.15■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Txnrd1Q9JMH6 613 aa25.15■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Flad1Q8R123 492 aa25.14■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Efcab2Q9CQ46 164 aa25.14■■□□□ 1.62
Cdx1-201ENSMUST00000025521 Gm21663A0A0G2JE01 267 aa25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Brpf1B2RRD7 1212 aa25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Gm7361D3Z6R1 267 aa25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 5031410I06RikE9Q4E0 267 aa25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Gm1979E9QAN3 267 aa25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Gm5862K7N5V5 267 aa25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Gm10220K7N660 267 aa25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Larp1Q6ZQ58 1072 aaKnown RBP25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 4933402E13RikQ9D4D2 429 aa25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 PigbQ9JJQ0 542 aa25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Mcm4P49717 862 aa25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Nlrp9bQ66X22 1003 aa25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Trim52Q8CDV4 233 aa25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 PtmsQ9D0J8 101 aaKnown RBP25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 MypnQ5DTJ9 1315 aa25.13■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Col22a1E9Q7P1 1613 aa25.12■■□□□ 1.61
Cdx1-201ENSMUST00000025521 AceP09470 1312 aa25.12■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Ttll7A4Q9F0 912 aa25.11■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Fam228bQ497Q6 232 aa25.11■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Taf5lQ91WQ5 589 aa25.11■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Pmfbp1Q9WVQ0 1022 aa25.11■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Rad50P70388 1312 aa25.11■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Ank1Q02357 1862 aa25.11■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Vwa3bJ9JI28 736 aa25.1■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Ms4a2P20490 235 aa25.1■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Pa2g4P50580 394 aaKnown RBP25.1■■□□□ 1.61
Cdx1-201ENSMUST00000025521 Ddx58Q6Q899 926 aa25.1■■□□□ 1.61
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms