RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Nol11Q8BJW5 723 aaKnown RBP19.54■□□□□ 0.72
Trim28-201ENSMUST00000005705 E4f1Q8CCE9 783 aa19.54■□□□□ 0.72
Trim28-201ENSMUST00000005705 Bms1Q6PGF5 1284 aaKnown RBP19.53■□□□□ 0.72
Trim28-201ENSMUST00000005705 CrebrfQ8CDG5 640 aaKnown RBP19.53■□□□□ 0.72
Trim28-201ENSMUST00000005705 Pmfbp1Q9WVQ0 1022 aa19.53■□□□□ 0.72
Trim28-201ENSMUST00000005705 MccE9PWI3 1003 aa19.53■□□□□ 0.72
Trim28-201ENSMUST00000005705 Neurod6P48986 337 aa19.53■□□□□ 0.72
Trim28-201ENSMUST00000005705 TatQ8QZR1 454 aa19.53■□□□□ 0.72
Trim28-201ENSMUST00000005705 Mdc1Q5PSV9 1707 aa19.52■□□□□ 0.72
Trim28-201ENSMUST00000005705 Hoxc9P09633 260 aa19.52■□□□□ 0.72
Trim28-201ENSMUST00000005705 Fam84aQ9D650 292 aa19.52■□□□□ 0.72
Trim28-201ENSMUST00000005705 Elp1Q7TT37 1333 aaKnown RBP19.52■□□□□ 0.72
Trim28-201ENSMUST00000005705 Gm45015A0A140LII9 184 aa19.52■□□□□ 0.72
Trim28-201ENSMUST00000005705 Gm18336A0A140LIU8 765 aa19.52■□□□□ 0.72
Trim28-201ENSMUST00000005705 Utp3Q9JI13 469 aaKnown RBP19.52■□□□□ 0.72
Trim28-201ENSMUST00000005705 Nkx2-3P97334 362 aa19.51■□□□□ 0.71
Trim28-201ENSMUST00000005705 Mindy4Q3UQI9 744 aa19.51■□□□□ 0.71
Trim28-201ENSMUST00000005705 Tgfb1i1Q62219 461 aa19.51■□□□□ 0.71
Trim28-201ENSMUST00000005705 4930504O13RikQ8C5Z9 145 aa19.51■□□□□ 0.71
Trim28-201ENSMUST00000005705 HypkQ9CR41 129 aa19.51■□□□□ 0.71
Trim28-201ENSMUST00000005705 Mmp8O70138 465 aa19.51■□□□□ 0.71
Trim28-201ENSMUST00000005705 Fam43aQ8BUP8 424 aa19.51■□□□□ 0.71
Trim28-201ENSMUST00000005705 Cdk12Q14AX6 1484 aaKnown RBP19.5■□□□□ 0.71
Trim28-201ENSMUST00000005705 Gm10471E9Q1C7 252 aa19.5■□□□□ 0.71
Trim28-201ENSMUST00000005705 Znf335A2A5K6 1337 aa19.5■□□□□ 0.71
Trim28-201ENSMUST00000005705 Aldh1l2Q8K009 923 aa19.5■□□□□ 0.71
Trim28-201ENSMUST00000005705 PtmsQ9D0J8 101 aaKnown RBP19.5■□□□□ 0.71
Trim28-201ENSMUST00000005705 4930407I10RikD3Z5T8 1512 aa19.5■□□□□ 0.71
Trim28-201ENSMUST00000005705 Gjb2Q00977 226 aa19.49■□□□□ 0.71
Trim28-201ENSMUST00000005705 Fam13bQ8K2H3 851 aa19.49■□□□□ 0.71
Trim28-201ENSMUST00000005705 Vwa3bJ9JI28 736 aa19.49■□□□□ 0.71
Trim28-201ENSMUST00000005705 Mrps27Q8BK72 415 aaKnown RBP19.49■□□□□ 0.71
Trim28-201ENSMUST00000005705 Slc39a6Q8C145 765 aa19.49■□□□□ 0.71
Trim28-201ENSMUST00000005705 CemipQ8BI06 1361 aa19.49■□□□□ 0.71
Trim28-201ENSMUST00000005705 Pdzrn3Q69ZS0 1063 aa19.49■□□□□ 0.71
Trim28-201ENSMUST00000005705 Pdcl2Q78Y63 240 aa19.49■□□□□ 0.71
Trim28-201ENSMUST00000005705 Abcc10Q8R4P9 1501 aa19.49■□□□□ 0.71
Trim28-201ENSMUST00000005705 MsnP26041 577 aaKnown RBP19.48■□□□□ 0.71
Trim28-201ENSMUST00000005705 Atp8b2P98199 1209 aa19.48■□□□□ 0.71
Trim28-201ENSMUST00000005705 Unc5clQ6R653 518 aa19.48■□□□□ 0.71
Trim28-201ENSMUST00000005705 Kdm4aQ8BW72 1064 aa19.47■□□□□ 0.71
Trim28-201ENSMUST00000005705 Fam50bQ9WTJ8 334 aa19.47■□□□□ 0.71
Trim28-201ENSMUST00000005705 Disp3A3KFU9 1347 aa19.47■□□□□ 0.71
Trim28-201ENSMUST00000005705 MecomP14404 1042 aa19.47■□□□□ 0.71
Trim28-201ENSMUST00000005705 Btbd11Q6GQW0 1109 aa19.47■□□□□ 0.71
Trim28-201ENSMUST00000005705 Dnajc10Q9DC23 793 aa19.47■□□□□ 0.71
Trim28-201ENSMUST00000005705 Adamtsl3G3UXC7 1706 aa19.47■□□□□ 0.71
Trim28-201ENSMUST00000005705 Cdca7lQ922M5 438 aa19.47■□□□□ 0.71
Trim28-201ENSMUST00000005705 LratQ9JI60 231 aa19.47■□□□□ 0.71
Trim28-201ENSMUST00000005705 Cavin1O54724 392 aa19.46■□□□□ 0.71
Trim28-201ENSMUST00000005705 Rassf8Q8CJ96 419 aa19.46■□□□□ 0.71
Trim28-201ENSMUST00000005705 N4bp2F8VQG7 1678 aaKnown RBP19.46■□□□□ 0.71
Trim28-201ENSMUST00000005705 Fyb1O35601 819 aa19.46■□□□□ 0.71
Trim28-201ENSMUST00000005705 Camta1A2A891 1682 aa19.46■□□□□ 0.71
Trim28-201ENSMUST00000005705 Adcy5P84309 1262 aa19.46■□□□□ 0.7
Trim28-201ENSMUST00000005705 GnpatP98192 678 aa19.46■□□□□ 0.7
Trim28-201ENSMUST00000005705 Map3k2Q61083 619 aa19.46■□□□□ 0.7
Trim28-201ENSMUST00000005705 Pik3c2aQ61194 1686 aa19.45■□□□□ 0.7
Trim28-201ENSMUST00000005705 Ier5O89113 308 aa19.45■□□□□ 0.7
Trim28-201ENSMUST00000005705 Nol8Q3UHX0 1147 aaKnown RBP19.45■□□□□ 0.7
Trim28-201ENSMUST00000005705 LlphQ9D945 130 aaKnown RBP19.45■□□□□ 0.7
Trim28-201ENSMUST00000005705 NcapgE9PWG6 1004 aa19.44■□□□□ 0.7
Trim28-201ENSMUST00000005705 AppP12023 770 aa19.44■□□□□ 0.7
Trim28-201ENSMUST00000005705 Cbx1P83917 185 aaKnown RBP19.44■□□□□ 0.7
Trim28-201ENSMUST00000005705 AnlnQ8K298 1121 aaKnown RBP19.44■□□□□ 0.7
Trim28-201ENSMUST00000005705 Map2P20357 1828 aa19.44■□□□□ 0.7
Trim28-201ENSMUST00000005705 Med1Q925J9 1575 aa19.43■□□□□ 0.7
Trim28-201ENSMUST00000005705 Mcmdc2E9Q956 681 aa19.43■□□□□ 0.7
Trim28-201ENSMUST00000005705 Smc3Q9CW03 1217 aaKnown RBP19.43■□□□□ 0.7
Trim28-201ENSMUST00000005705 Atp6v1dP57746 247 aa19.42■□□□□ 0.7
Trim28-201ENSMUST00000005705 Bach2P97303 839 aa19.42■□□□□ 0.7
Trim28-201ENSMUST00000005705 Cers3Q1A3B0 383 aa19.42■□□□□ 0.7
Trim28-201ENSMUST00000005705 MlecQ6ZQI3 291 aaKnown RBP19.42■□□□□ 0.7
Trim28-201ENSMUST00000005705 Plcd3Q8K2J0 785 aa19.42■□□□□ 0.7
Trim28-201ENSMUST00000005705 Foxp4Q9DBY0 795 aaKnown RBP19.42■□□□□ 0.7
Trim28-201ENSMUST00000005705 Dhx38Q80X98 1228 aa19.41■□□□□ 0.7
Trim28-201ENSMUST00000005705 Ccdc66Q6NS45 935 aa19.41■□□□□ 0.7
Trim28-201ENSMUST00000005705 GphnQ8BUV3 769 aaKnown RBP19.41■□□□□ 0.7
Trim28-201ENSMUST00000005705 KinQ8K339 391 aa19.41■□□□□ 0.7
Trim28-201ENSMUST00000005705 Slc26a8Q8R0C3 999 aa19.41■□□□□ 0.7
Trim28-201ENSMUST00000005705 Zbtb3Q91X45 518 aa19.41■□□□□ 0.7
Trim28-201ENSMUST00000005705 Elmsan1E9Q2I4 1089 aaKnown RBP19.4■□□□□ 0.7
Trim28-201ENSMUST00000005705 Evi5lH3BKQ3 813 aa19.4■□□□□ 0.7
Trim28-201ENSMUST00000005705 Igfbp6P47880 238 aa19.4■□□□□ 0.7
Trim28-201ENSMUST00000005705 Nom1Q3UFM5 854 aaKnown RBP19.4■□□□□ 0.7
Trim28-201ENSMUST00000005705 Anp32cQ64G17 123 aa19.4■□□□□ 0.7
Trim28-201ENSMUST00000005705 Sh3bp5Q9Z131 463 aa19.4■□□□□ 0.7
Trim28-201ENSMUST00000005705 Cnnm3Q32NY4 713 aa19.4■□□□□ 0.7
Trim28-201ENSMUST00000005705 Phf23Q8BSN5 401 aa19.4■□□□□ 0.7
Trim28-201ENSMUST00000005705 Ubr1O70481 1757 aa19.4■□□□□ 0.7
Trim28-201ENSMUST00000005705 Igflr1Q3U4N7 345 aa19.4■□□□□ 0.7
Trim28-201ENSMUST00000005705 ScaperF8VQ70 1398 aaKnown RBP19.39■□□□□ 0.7
Trim28-201ENSMUST00000005705 Zpr1Q62384 459 aa19.39■□□□□ 0.69
Trim28-201ENSMUST00000005705 Ltv1Q6NSQ7 470 aaKnown RBP19.39■□□□□ 0.69
Trim28-201ENSMUST00000005705 Glipr1l2Q9CQ35 332 aa19.39■□□□□ 0.69
Trim28-201ENSMUST00000005705 Rbm42Q91V81 474 aaKnown RBP19.38■□□□□ 0.69
Trim28-201ENSMUST00000005705 DpydQ8CHR6 1025 aa19.38■□□□□ 0.69
Trim28-201ENSMUST00000005705 Sf3a1Q8K4Z5 791 aaKnown RBP19.38■□□□□ 0.69
Trim28-201ENSMUST00000005705 Top1mtQ8R4U6 593 aa19.38■□□□□ 0.69
Trim28-201ENSMUST00000005705 Rufy3Q9D394 469 aa19.38■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms