RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 NPIPB15A6NHN6 443 aaPredicted RBP16.98■□□□□ 0.31
SCARB2-223ENST00000640640 SNAP29O95721 258 aa16.98■□□□□ 0.31
SCARB2-223ENST00000640640 AGR2O95994 175 aa16.98■□□□□ 0.31
SCARB2-223ENST00000640640 PRKAR1AP10644 381 aa16.98■□□□□ 0.31
SCARB2-223ENST00000640640 AZGP1P25311 298 aaKnown RBP16.98■□□□□ 0.31
SCARB2-223ENST00000640640 CLDN8P56748 225 aa16.98■□□□□ 0.31
SCARB2-223ENST00000640640 KCNAB2Q13303 367 aa16.98■□□□□ 0.31
SCARB2-223ENST00000640640 KRT74Q7RTS7 529 aa16.98■□□□□ 0.31
SCARB2-223ENST00000640640 FBXO15Q8NCQ5 510 aaPredicted RBP16.98■□□□□ 0.31
SCARB2-223ENST00000640640 KCNN1Q92952 543 aa16.98■□□□□ 0.31
SCARB2-223ENST00000640640 IFT27Q9BW83 186 aa16.98■□□□□ 0.31
SCARB2-223ENST00000640640 XKR8Q9H6D3 395 aa16.98■□□□□ 0.31
SCARB2-223ENST00000640640 DOCK2Q92608 1830 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 B4DGG1 531 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 VEGFDO43915 354 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 C8orf89P0DMQ9 161 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 CAPN3P20807 821 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 KCNA5P22460 613 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 KDELR2P33947 212 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 IGFALSP35858 605 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 RGRP47804 291 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 TNFAIP8L3Q5GJ75 292 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 MUS81Q96NY9 551 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 IL17FQ96PD4 163 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 RNF38Q9H0F5 515 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 DZANK1Q9NVP4 752 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 ZNF24P17028 368 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 MVKQ03426 396 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 CLEC12AQ5QGZ9 265 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 C9orf43Q8TAL5 461 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-223ENST00000640640 TBC1D17Q9HA65 648 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 PAPPAQ13219 1627 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 GLOD5A6NK44 160 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 EIF3FO00303 357 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-223ENST00000640640 SNX4O95219 450 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 ZNF354BQ96LW1 612 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 RDH12Q96NR8 316 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 ALPK1Q96QP1 1244 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 GSDMCQ9BYG8 508 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 CLEC4MQ9H2X3 399 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-223ENST00000640640 WBP11Q9Y2W2 641 aaKnown RBP16.97■□□□□ 0.31
SCARB2-223ENST00000640640 FAM240BA0A1B0GVZ2 78 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 TNFP01375 233 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 HOXD8P13378 290 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-223ENST00000640640 HSD17B1P14061 328 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 ATF6P18850 670 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 PSMD4P55036 377 aaKnown RBP16.97■□□□□ 0.31
SCARB2-223ENST00000640640 DEFB103AP81534 67 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 CRTC2Q53ET0 693 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-223ENST00000640640 KCTD11Q693B1 232 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 LETMD1Q6P1Q0 360 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 KBTBD6Q86V97 674 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 CBARPQ8N350 705 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-223ENST00000640640 ZNF433Q8N7K0 673 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-223ENST00000640640 KXD1Q9BQD3 176 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 PHF11Q9UIL8 331 aa16.97■□□□□ 0.31
SCARB2-223ENST00000640640 MARF1Q9Y4F3 1742 aaKnown RBP16.97■□□□□ 0.31
SCARB2-223ENST00000640640 TMEM150CB9EJG8 249 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 SLC22A1O15245 554 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 UBXN7O94888 489 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 C6P13671 934 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 NUP62P37198 522 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-223ENST00000640640 TMEM44Q2T9K0 475 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 EOGTQ5NDL2 527 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 AQP11Q8NBQ7 271 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 TP53INP1Q96A56 240 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 MTG2Q9H4K7 406 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 SFXN1Q9H9B4 322 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 TLR4O00206 839 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 NME4O00746 187 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 PRAMEF12O95522 483 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 FOXA1P55317 472 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 KIAA1614Q5VZ46 1190 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 UTS2BQ765I0 119 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 OR10H4Q8NGA5 316 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 CAPN14A8MX76 684 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 RPS3P23396 243 aaKnown RBP eCLIP16.96■□□□□ 0.311e-6■■■■■ 29.8
SCARB2-223ENST00000640640 SDC2P34741 201 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 OR1E2P47887 323 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 ZNF140P52738 457 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-223ENST00000640640 BNIP3Q12983 259 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 MADCAM1Q13477 382 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 HDDC2Q7Z4H3 204 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 CLIP4Q8N3C7 705 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 ZNF689Q96CS4 500 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-223ENST00000640640 P2RY13Q9BPV8 354 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 SLC12A9Q9BXP2 914 aa16.96■□□□□ 0.31
SCARB2-223ENST00000640640 SOX17Q9H6I2 414 aaPredicted RBP16.96■□□□□ 0.31
SCARB2-223ENST00000640640 BCORQ6W2J9 1755 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 PLOD3O60568 738 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 GRK6P43250 576 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 MAGEA3P43357 314 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 MS4A2Q01362 244 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 KCNC4Q03721 635 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 IL18Q14116 193 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 TLR1Q15399 786 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 MPP7Q5T2T1 576 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 GOLM1Q8NBJ4 401 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 OR10H5Q8NGA6 315 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 OR56A1Q8NGH5 318 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms