RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 LRRC56Q8IYG6 542 aaPredicted RBP9.53□□□□□ -0.88
VTA1-205ENST00000620996 SLC7A5P1Q8MH63 180 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 OR4A15Q8NGL6 344 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 SETD7Q8WTS6 366 aaKnown RBP9.53□□□□□ -0.88
VTA1-205ENST00000620996 OR1E3Q8WZA6 343 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 TESCQ96BS2 214 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 F2RL3Q96RI0 385 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 MACROD1Q9BQ69 325 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 OSBPL10Q9BXB5 764 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 MIEF1Q9NQG6 463 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 BTBD3Q9Y2F9 522 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 PCDHB3Q9Y5E6 796 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 AP4B1Q9Y6B7 739 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 DNMT3AQ9Y6K1 912 aaPredicted RBP9.53□□□□□ -0.88
VTA1-205ENST00000620996 GABRR3A8MPY1 467 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 GNGT2O14610 69 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 SH3BP5O60239 455 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 GPIP06744 558 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 PIM1P11309 404 aaPredicted RBP9.53□□□□□ -0.88
VTA1-205ENST00000620996 ZNF23P17027 643 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 ENGP17813 658 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 GABRG2P18507 467 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 BMP8BP34820 402 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 CHRNB3Q05901 458 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 ZNF763Q0D2J5 394 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 CCNYL2Q5T2Q4 361 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 CROCCQ5TZA2 2017 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 PRR23BQ6ZRT6 265 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 GALNT10Q86SR1 603 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 DEFB119Q8N690 84 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 TMEM145Q8NBT3 493 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 TNIP2Q8NFZ5 429 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 OR4E2Q8NGC2 313 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 OR52E1Q8NGJ3 308 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 DPH2Q9BQC3 489 aaPredicted RBP9.53□□□□□ -0.88
VTA1-205ENST00000620996 TIMM29Q9BSF4 260 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 CHID1Q9BWS9 393 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 MUC13Q9H3R2 512 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 FZD4Q9ULV1 537 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 SCML1Q9UN30 329 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 PCDHGB4Q9UN71 923 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 SLC17A4Q9Y2C5 497 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 TRIOO75962 3097 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 CKAP5Q14008 2032 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 GPR89AB7ZAQ6 455 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 STK25O00506 426 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 SEMA4FO95754 770 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 GPR89BP0CG08 455 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 GSTT2P0CG29 244 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 GSTT2BP0CG30 244 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 RAB28P51157 221 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 PLA2G16P53816 162 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 PDK3Q15120 406 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 FAM98BQ52LJ0 330 aaKnown RBP9.53□□□□□ -0.88
VTA1-205ENST00000620996 TPRG1LQ5T0D9 272 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 MICU2Q8IYU8 434 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 MMP21Q8N119 569 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 CBR4Q8N4T8 237 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 LINC01555Q8NAE3 123 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 CHTF18Q8WVB6 975 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 RLN3Q8WXF3 142 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 PPCDCQ96CD2 204 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 CXorf40BQ96DE9 158 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 WDR92Q96MX6 357 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 TPSD1Q9BZJ3 242 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 SERHLQ9NQF3 203 aa9.53□□□□□ -0.88
VTA1-205ENST00000620996 SCHIP1Q9P0W5 487 aaPredicted RBP9.53□□□□□ -0.88
VTA1-205ENST00000620996 FBXO9Q9UK97 447 aaPredicted RBP9.53□□□□□ -0.88
VTA1-205ENST00000620996 HTR3EA5X5Y0 456 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 CLIC1O00299 241 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 MBTPS2O43462 519 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 PEX1O43933 1283 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 NELFEP18615 380 aaKnown RBP9.52□□□□□ -0.89
VTA1-205ENST00000620996 GGT1P19440 569 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 HNRNPA2B1P22626 353 aaKnown RBP9.52□□□□□ -0.89
VTA1-205ENST00000620996 CXCR2P25025 360 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 AKT2P31751 481 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 PXNP49023 591 aaPredicted RBP9.52□□□□□ -0.89
VTA1-205ENST00000620996 CTBSQ01459 385 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 SLC14A1Q13336 389 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 DPY19L1Q2PZI1 675 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 OTUD3Q5T2D3 398 aaPredicted RBP9.52□□□□□ -0.89
VTA1-205ENST00000620996 ENPP6Q6UWR7 440 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 SZRD1Q7Z422 152 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 TRIM48Q8IWZ4 208 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 RIMKLAQ8IXN7 391 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 KLHDC8AQ8IYD2 350 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 C10orf111Q8N326 155 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 TRPV3Q8NET8 790 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 CIDECQ96AQ7 238 aaPredicted RBP9.52□□□□□ -0.89
VTA1-205ENST00000620996 HHIPQ96QV1 700 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 SLC29A1Q99808 456 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 CPPED1Q9BRF8 314 aaPredicted RBP9.52□□□□□ -0.89
VTA1-205ENST00000620996 TMEM168Q9H0V1 697 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 UBE2ZQ9H832 354 aaPredicted RBP9.52□□□□□ -0.89
VTA1-205ENST00000620996 TBC1D29Q9UFV1 150 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 OAZ3Q9UMX2 235 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 SNX8Q9Y5X2 465 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 GON4LQ3T8J9 2241 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 SERPINA1P01009 418 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms