RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 FMO5P49326 533 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 FUT6P51993 359 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 SUCLG1P53597 346 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 GALCP54803 685 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 EIF3EP60228 445 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 RPS8P62241 208 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 EEF1A1P68104 462 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 CTAG1AP78358 180 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 MRPS15P82914 257 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 TNFRSF17Q02223 184 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 MZT1Q08AG7 82 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 PDZK1IP1Q13113 114 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 DMP1Q13316 513 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 PPIGQ13427 754 aaKnown RBP eCLIP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 OLIG2Q13516 323 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 COTL1Q14019 142 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 IL18Q14116 193 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 PDK3Q15120 406 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 CEBPEQ15744 281 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 SSX2Q16385 188 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 CDO1Q16878 200 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 CBWD6Q4V339 395 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 TAF1BQ53T94 588 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 CBWD3Q5JTY5 395 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 C6orf141Q5SZD1 244 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 RARS2Q5T160 578 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 CCNYL2Q5T2Q4 361 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 GCNT6Q5T4J0 391 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 ARMC12Q5T9G4 340 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 C6orf163Q5TEZ5 329 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 EEF1A1P5Q5VTE0 462 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 FRG2Q64ET8 278 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 DHRS7BQ6IAN0 325 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 OR6B2Q6IFH4 312 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 CLEC2AQ6UVW9 174 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 C6orf89Q6UWU4 347 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 GFRALQ6UXV0 394 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 DET1Q7L5Y6 550 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 SATL1Q86VE3 508 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 AMZ2Q86W34 360 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 TMEM219Q86XT9 240 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 WDR49Q8IV35 697 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 SLC22A9Q8IVM8 553 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 SIAH3Q8IW03 269 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 HACE1Q8IYU2 909 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 RNF113BQ8IZP6 322 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 SPATA6LQ8N4H0 392 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 NECAB1Q8N987 351 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 DNAAF3Q8N9W5 541 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 ZNF671Q8TAW3 534 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 SELENOMQ8WWX9 145 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 STARD8Q92502 1023 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 CDKL2Q92772 493 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 RASD2Q96D21 266 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 ARHGEF26Q96DR7 871 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 MMABQ96EY8 250 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 ELMOD3Q96FG2 381 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 MTMR9Q96QG7 549 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 PCYT2Q99447 389 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 GPA33Q99795 319 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 SRSF8Q9BRL6 282 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 FAM213AQ9BRX8 229 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 LRRC1Q9BTT6 524 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 TMEM117Q9H0C3 514 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 GLT8D2Q9H1C3 349 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 TRPV6Q9H1D0 765 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 SYNDIG1Q9H7V2 258 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 HINT3Q9NQE9 182 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 TMEM30AQ9NV96 361 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 HAO2Q9NYQ3 351 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 WSB2Q9NYS7 404 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 EMC3Q9P0I2 261 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 CD300AQ9UGN4 299 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 DBNLQ9UJU6 430 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 DNPEPQ9ULA0 475 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 PLA2G4CQ9UP65 541 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 EXO1Q9UQ84 846 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 ZNF148Q9UQR1 794 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 NUDCQ9Y266 331 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 R3HDM2Q9Y2K5 976 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 C15orf41Q9Y2V0 281 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 AAR2Q9Y312 384 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 CBY1Q9Y3M2 126 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 LSM4Q9Y4Z0 139 aaKnown RBP2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 TNIKQ9UKE5 1360 aa2.47□□□□□ -2.01
HMGB1P24-202ENST00000615653 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.46□□□□□ -2.02
HMGB1P24-202ENST00000615653 A0A0U1RQS6 177 aa2.46□□□□□ -2.02
HMGB1P24-202ENST00000615653 LOC100506127A0A0U1RQW1 187 aa2.46□□□□□ -2.02
HMGB1P24-202ENST00000615653 C2orf92A0A1B0GVN3 265 aa2.46□□□□□ -2.02
HMGB1P24-202ENST00000615653 SERTM2A0A1B0GWG4 89 aa2.46□□□□□ -2.02
HMGB1P24-202ENST00000615653 A0A1W2PQF6 199 aa2.46□□□□□ -2.02
HMGB1P24-202ENST00000615653 FAM149AA5PLN7 773 aa2.46□□□□□ -2.02
HMGB1P24-202ENST00000615653 MFSD2BA6NFX1 497 aa2.46□□□□□ -2.02
HMGB1P24-202ENST00000615653 PCP4L1A6NKN8 68 aa2.46□□□□□ -2.02
HMGB1P24-202ENST00000615653 LDLRAD4O15165 306 aa2.46□□□□□ -2.02
HMGB1P24-202ENST00000615653 CLIC2O15247 247 aa2.46□□□□□ -2.02
HMGB1P24-202ENST00000615653 PAPSS1O43252 624 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P24-202ENST00000615653 SEC14L5O43304 696 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms