RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 A0A096LPI6 279 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 SNAP29O95721 258 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 TNFP01375 233 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 DHRS4L1P0CG22 281 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 IRF5Q13568 498 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 TYSND1Q2T9J0 566 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 ATG9BQ674R7 924 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 BLOC1S3Q6QNY0 202 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 OR56A1Q8NGH5 318 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 MAPK15Q8TD08 544 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 TMCO6Q96DC7 493 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 CRELD1Q96HD1 420 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 PRRG4Q9BZD6 226 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 SOX17Q9H6I2 414 aaPredicted RBP13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 PNO1Q9NRX1 252 aaKnown RBP13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 MED31Q9Y3C7 131 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 CLCA3PQ9Y6N3 262 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 A8MUA0 341 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 AURKAO14965 403 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 CH25HO95992 272 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 IFNA6P05013 189 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 SMSP52788 366 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 XKR4Q5GH76 650 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 TCEAL5Q5H9L2 206 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 REEP3Q6NUK4 255 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 ZNF773Q6PK81 442 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 BTN2A1Q7KYR7 527 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 EFHD2Q96C19 240 aaPredicted RBP13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 C12orf43Q96C57 262 aaKnown RBP13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 MUS81Q96NY9 551 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 TRIB3Q96RU7 358 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 RAD9AQ99638 391 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 DPYSL5Q9BPU6 564 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 XKR8Q9H6D3 395 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 TUBA8Q9NY65 449 aaPredicted RBP13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 SLC16A5O15375 505 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 INMTO95050 263 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 HTR1EP28566 365 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 LRIG1Q96JA1 1093 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 ZFP3Q96NJ6 502 aa13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 RBMX2Q9Y388 322 aaKnown RBP13.78□□□□□ -0.2
PCDHB16-201ENST00000609684 MYOCOSA0A1B0GUC4 107 aa13.77□□□□□ -0.2
PCDHB16-201ENST00000609684 TTC34A8MYJ7 566 aa13.77□□□□□ -0.2
PCDHB16-201ENST00000609684 CAPN5O15484 640 aaPredicted RBP13.77□□□□□ -0.2
PCDHB16-201ENST00000609684 EEDO75530 441 aaKnown RBP13.77□□□□□ -0.2
PCDHB16-201ENST00000609684 KCNAB2Q13303 367 aa13.77□□□□□ -0.2
PCDHB16-201ENST00000609684 C12orf76Q8N812 135 aaPredicted RBP13.77□□□□□ -0.2
PCDHB16-201ENST00000609684 NEK7Q8TDX7 302 aa13.77□□□□□ -0.2
PCDHB16-201ENST00000609684 GSDMCQ9BYG8 508 aa13.77□□□□□ -0.2
PCDHB16-201ENST00000609684 COMMD4Q9H0A8 199 aa13.77□□□□□ -0.2
PCDHB16-201ENST00000609684 TLX2O43763 284 aaPredicted RBP13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 ABCB7O75027 752 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 C1GALT1C1LP0DN25 315 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 ST3GAL3Q11203 375 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 CYP27C1Q4G0S4 372 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 ZCCHC12Q6PEW1 402 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 ASRGL1Q7L266 308 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 ADGRD2Q7Z7M1 963 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 FUBP1Q96AE4 644 aaKnown RBP13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 SP140LQ9H930 580 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 IGSF5Q9NSI5 407 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 HCN4Q9Y3Q4 1203 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 PCDHB3Q9Y5E6 796 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 SPO11Q9Y5K1 396 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 PRMT3O60678 531 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 LATS1O95835 1130 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 BPIP17213 487 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 MATN1P21941 496 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 GNALP38405 381 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 TSTQ16762 297 aaKnown RBP13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 TSPAN33Q86UF1 283 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 MINDY1Q8N5J2 469 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 KCTD7Q96MP8 289 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 DGAT2Q96PD7 388 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 BOCQ9BWV1 1114 aa13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 GPN1Q9HCN4 374 aaPredicted RBP13.77□□□□□ -0.21
PCDHB16-201ENST00000609684 ZBTB42B2RXF5 422 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 ACADLP28330 430 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 CD70P32970 193 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 PRPF38BQ5VTL8 546 aaKnown RBP13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 LINC00471Q8N535 108 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 KDM1BQ8NB78 822 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 CHST4Q8NCG5 386 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 DSN1Q9H410 356 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 MTMR10Q9NXD2 777 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 TNFRSF10DQ9UBN6 386 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 TRPM3Q9HCF6 1732 aaPredicted RBP13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 A0A1W2PPW3 197 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 ANXA2P2A6NMY6 339 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 RFPL2O75678 378 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 ANXA2P07355 339 aaKnown RBP13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 TIA1P31483 386 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 MLLT3P42568 568 aaPredicted RBP13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 BCAP31P51572 246 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 OR4D2P58180 307 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 VMACQ2NL98 169 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 ITPRIPL2Q3MIP1 535 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 FBXO43Q4G163 708 aa13.76□□□□□ -0.21
PCDHB16-201ENST00000609684 NUP54Q7Z3B4 507 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms