RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 GALNT1Q10472 559 aaPredicted RBP12.14□□□□□ -0.47
UPF1-208ENST00000600012 TRAF3Q13114 568 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 GKAP1Q5VSY0 366 aaPredicted RBP12.14□□□□□ -0.47
UPF1-208ENST00000600012 CLEC6AQ6EIG7 209 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 GPRIN3Q6ZVF9 776 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 THOC6Q86W42 341 aaKnown RBP12.14□□□□□ -0.47
UPF1-208ENST00000600012 KMT5CQ86Y97 462 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 KLHDC8AQ8IYD2 350 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 OR52E1Q8NGJ3 308 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 OR56A3Q8NH54 315 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 C10orf82Q8WW14 230 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 PSMG3-AS1Q96PY0 264 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 CDK15Q96Q40 435 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 ZNF382Q96SR6 550 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 CD180Q99467 661 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 MENTQ9BUN1 341 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 TMEM120AQ9BXJ8 343 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 GPR87Q9BY21 358 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 ACTL8Q9H568 366 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 XKR8Q9H6D3 395 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 MVB12BQ9H7P6 319 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 IPPKQ9H8X2 491 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 SPATA7Q9P0W8 599 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 KLHL14Q9P2G3 628 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 HEBP2Q9Y5Z4 205 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 ESPL1Q14674 2120 aa12.14□□□□□ -0.47
UPF1-208ENST00000600012 SPTBP11277 2137 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 IGHV5-51A0A0C4DH38 117 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 A0A0G2JND7 137 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 TLCD2A6NGC4 264 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 E7ENX8 843 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 SKAP2O75563 359 aaPredicted RBP12.13□□□□□ -0.47
UPF1-208ENST00000600012 SNUPNO95149 360 aaKnown RBP12.13□□□□□ -0.47
UPF1-208ENST00000600012 MLYCDO95822 493 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 JUNP05412 331 aaKnown RBP12.13□□□□□ -0.47
UPF1-208ENST00000600012 ERGP11308 486 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 FOLR1P15328 257 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 EPB42P16452 691 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 SERPINB3P29508 390 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 PKLRP30613 574 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 PIK3CGP48736 1102 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 CCNG1P51959 295 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 AQP5P55064 265 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 PPP1CAP62136 330 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 TAP2Q03519 686 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 CDC16Q13042 620 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 PLCL1Q15111 1095 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 PDCD2Q16342 344 aaPredicted RBP12.13□□□□□ -0.47
UPF1-208ENST00000600012 UGT8Q16880 541 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 PWWP2BQ6NUJ5 590 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 METTL2BQ6P1Q9 378 aaKnown RBP12.13□□□□□ -0.47
UPF1-208ENST00000600012 SUSD1Q6UWL2 747 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 WDR75Q8IWA0 830 aaKnown RBP12.13□□□□□ -0.47
UPF1-208ENST00000600012 LRRC56Q8IYG6 542 aaPredicted RBP12.13□□□□□ -0.47
UPF1-208ENST00000600012 OR4F6Q8NGB9 312 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 THAP4Q8WY91 577 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 ATP6V1E2Q96A05 226 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 SEC16BQ96JE7 1060 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 PPP1R36Q96LQ0 422 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 OR4K3Q96R72 315 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 CCDC177Q9NQR7 707 aaPredicted RBP12.13□□□□□ -0.47
UPF1-208ENST00000600012 FGF21Q9NSA1 209 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 INTS7Q9NVH2 962 aaKnown RBP12.13□□□□□ -0.47
UPF1-208ENST00000600012 POLG2Q9UHN1 485 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 ZNF225Q9UK10 706 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 ICKQ9UPZ9 632 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 SH2B3Q9UQQ2 575 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.13□□□□□ -0.47
UPF1-208ENST00000600012 USH1CQ9Y6N9 552 aa12.13□□□□□ -0.47
UPF1-208ENST00000600012 SEC16AO15027 2179 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 BLACEA4D250 179 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 ZNF195O14628 629 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 AZIN1O14977 448 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 VPS4BO75351 444 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 CRCPO75575 148 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 DNAJB5O75953 348 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 ESRRBO95718 433 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 OTCP00480 354 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 PDGFAP04085 211 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 EBLN1P0CF75 366 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 PTPN4P29074 926 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 ARL4DP49703 201 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 ARFIP2P53365 341 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 PKNOX1P55347 436 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 RPS15P62841 145 aaKnown RBP12.12□□□□□ -0.47
UPF1-208ENST00000600012 KCNAB1Q14722 419 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 CYP2A13Q16696 494 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 TCHHL1Q5QJ38 904 aaPredicted RBP12.12□□□□□ -0.47
UPF1-208ENST00000600012 THEMIS2Q5TEJ8 643 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 VWA5B1Q5TIE3 1220 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 PRAMEF13Q5VWM6 474 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 KANK2Q63ZY3 851 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 CAPN13Q6MZZ7 669 aaPredicted RBP12.12□□□□□ -0.47
UPF1-208ENST00000600012 LETMD1Q6P1Q0 360 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 D2HGDHQ8N465 521 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 AFAP1L2Q8N4X5 818 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 RAB42Q8N4Z0 105 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 EFCAB3Q8N7B9 438 aa12.12□□□□□ -0.47
UPF1-208ENST00000600012 CDYL2Q8N8U2 506 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms