RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 VN1R5Q7Z5H4 357 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 KLHDC8AQ8IYD2 350 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 SLC22A15Q8IZD6 547 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 SPARTQ8N0X7 666 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 MRPL43Q8N983 215 aaKnown RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 FBXO15Q8NCQ5 510 aaPredicted RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 CHDHQ8NE62 594 aaPredicted RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 OR7A2PQ8NGA2 310 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 WDR20Q8TBZ3 569 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 BORCS5Q969J3 196 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 EGLN2Q96KS0 407 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 BCL7BQ9BQE9 202 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 EFCAB11Q9BUY7 163 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 PBX4Q9BYU1 374 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 CCDC90BQ9GZT6 254 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 GABARAPL1Q9H0R8 117 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 TRIT1Q9H3H1 467 aaKnown RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 REEP1Q9H902 201 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 GPN2Q9H9Y4 310 aaPredicted RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 TPT1P8Q9HAU6 139 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 ITM2CQ9NQX7 267 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 MARK1Q9P0L2 795 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 STOX2Q9P2F5 926 aaPredicted RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF282Q9UDV7 671 aaPredicted RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 MAGED1Q9Y5V3 778 aaPredicted RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 U3KQV3 271 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 BRCA2P51587 3418 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 CROCCQ5TZA2 2017 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 KLHL33A6NCF5 533 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 ARHGEF33A8MVX0 844 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 PTGES3LE9PB15 166 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 SCAMP2O15127 329 aaKnown RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 SUV39H1O43463 412 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 TSPAN6O43657 245 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 JRKO75564 520 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 IFNA14P01570 189 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 RHOP08100 348 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 HNRNPA1P09651 372 aaKnown RBP eCLIP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 SYN1P17600 705 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 PTX3P26022 381 aaPredicted RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 HOXA9P31269 272 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 SHMT2P34897 504 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 CDKN2CP42773 168 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 ISL1P61371 349 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 IL1RL1Q01638 556 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 OCA2Q04671 838 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 ELP6Q0PNE2 266 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 C16orf72Q14CZ0 275 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 TCEA2Q15560 299 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 NKG7Q16617 165 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 MOGQ16653 247 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 MEP1AQ16819 746 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 TMEM220Q6QAJ8 160 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 PIWIL3Q7Z3Z3 882 aaKnown RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 CAMKMTQ7Z624 323 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 TSPYL5Q86VY4 417 aaPredicted RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 RASGRP3Q8IV61 690 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 SYTL1Q8IYJ3 562 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 SVOPQ8N4V2 548 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 C11orf65Q8NCR3 313 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 OR56A3Q8NH54 315 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 FRS2Q8WU20 508 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF566Q969W8 418 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 MBOAT4Q96T53 435 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 EBPLQ9BY08 206 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 AMBRA1Q9C0C7 1298 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 CLEC4MQ9H2X3 399 aaPredicted RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 RAD21L1Q9H4I0 556 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 CARS2Q9HA77 564 aaKnown RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 TLR9Q9NR96 1032 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 SLC6A13Q9NSD5 602 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 SH3BP4Q9P0V3 963 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 SAMHD1Q9Y3Z3 626 aaKnown RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 PCDHGB3Q9Y5G1 929 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 COL4A6Q14031 1691 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 SLC5A10A0PJK1 596 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 SH3PXD2BA1X283 911 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 TRIM64BA6NI03 449 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 TTC34A8MYJ7 566 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 E7EQ34 232 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 M0QX08 132 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 FOXE1O00358 373 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-206ENST00000589117 RNASET2O00584 256 aaKnown RBP7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ATE1O95260 518 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ANGPTL1O95841 491 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 BPNT1O95861 308 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 SLC16A8O95907 504 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ABCB1P08183 1280 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ITGA2P17301 1181 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 HOXB9P17482 250 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ITIH1P19827 911 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 PRKACGP22612 351 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 DGKGP49619 791 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 CD47Q08722 323 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 NFATC3Q12968 1075 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 CDK5R2Q13319 367 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 TMED1Q13445 227 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 UGT8Q16880 541 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ZXDCQ2QGD7 858 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-206ENST00000589117 LIPIQ6XZB0 460 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms