RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 RELAQ04206 551 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 CYP4F3Q08477 520 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 TLR1Q15399 786 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 ADPRMQ3LIE5 342 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 SLC23A3Q6PIS1 610 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 VN1R4Q7Z5H5 301 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 DEFB107AQ8IZN7 70 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 TRPV3Q8NET8 790 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 BAHD1Q8TBE0 780 aaPredicted RBP24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 FCRL4Q96PJ5 515 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 ZBTB18Q99592 522 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 C11orf16Q9NQ32 467 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 LHX9Q9NQ69 397 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 NLGN3Q9NZ94 848 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 NDUFS4O43181 175 aa24.86■■□□□ 1.57
SCAMP4-210ENST00000588555 NUDT21O43809 227 aaKnown RBP24.86■■□□□ 1.57
SCAMP4-210ENST00000588555 C21orf58P58505 322 aa24.86■■□□□ 1.57
SCAMP4-210ENST00000588555 ART3Q13508 389 aa24.86■■□□□ 1.57
SCAMP4-210ENST00000588555 ARMC6Q6NXE6 501 aa24.86■■□□□ 1.57
SCAMP4-210ENST00000588555 HACD2Q6Y1H2 254 aa24.86■■□□□ 1.57
SCAMP4-210ENST00000588555 UBE3DQ7Z6J8 389 aa24.86■■□□□ 1.57
SCAMP4-210ENST00000588555 GATAD2AQ86YP4 633 aa24.86■■□□□ 1.57
SCAMP4-210ENST00000588555 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.86■■□□□ 1.57
SCAMP4-210ENST00000588555 RAB3IPQ96QF0 476 aaPredicted RBP24.86■■□□□ 1.57
SCAMP4-210ENST00000588555 SORBS1Q9BX66 1292 aaKnown RBP24.86■■□□□ 1.57
SCAMP4-210ENST00000588555 KLHL25Q9H0H3 589 aa24.86■■□□□ 1.57
SCAMP4-210ENST00000588555 LRIT1Q9P2V4 623 aa24.86■■□□□ 1.57
SCAMP4-210ENST00000588555 FAM86C2PA6NEL3 165 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 DFNA5O60443 496 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 PRMT3O60678 531 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 BSGP35613 385 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 PGM1P36871 562 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 DGKQP52824 942 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 CLNS1AP54105 237 aaKnown RBP24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 EPHA4P54764 986 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 LPAL2Q16609 132 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 FAM174BQ3ZCQ3 159 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 C8orf82Q6P1X6 216 aaPredicted RBP24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 C16orf89Q6UX73 402 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 MCUR1Q96AQ8 359 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 TESCQ96BS2 214 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 OR2A5Q96R48 311 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 GAREM1Q9H706 876 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 AHSPQ9NZD4 102 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 MCM8Q9UJA3 840 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 SLC6A14Q9UN76 642 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 RHPN2P1A8MT19 583 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 PRAMEF10O60809 474 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 GBAP04062 536 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 SERPIND1P05546 499 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 PRPS1L1P21108 318 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 TPP2P29144 1249 aaPredicted RBP24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 TRIM61Q5EBN2 209 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 PAGE3Q5JUK9 113 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 SPANXN4Q5MJ08 99 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 PGAM4Q8N0Y7 254 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 PCYOX1LQ8NBM8 494 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 MACROD1Q9BQ69 325 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 MMADHCQ9H3L0 296 aaPredicted RBP24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 SEMA6CQ9H3T2 930 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 WDR41Q9HAD4 459 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 NDE1Q9NXR1 346 aa24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.85■■□□□ 1.57
SCAMP4-210ENST00000588555 A0A088AWK7 358 aa24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 GNG14A0A1W2PPG7 69 aa24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 RTCAO00442 366 aaKnown RBP24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 YKT6O15498 198 aa24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 LRATO95237 230 aa24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 STATHP02808 62 aa24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 KLK1P06870 262 aa24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 GLB1P16278 677 aa24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 ASMTP46597 345 aa24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 ZNF763Q0D2J5 394 aa24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 TMEM35AQ53FP2 167 aa24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 ROPN1LQ96C74 230 aa24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 THTPAQ9BU02 230 aa24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 REXO4Q9GZR2 422 aaKnown RBP24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 KLHL31Q9H511 634 aa24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 LEF1Q9UJU2 399 aaPredicted RBP24.84■■□□□ 1.57
SCAMP4-210ENST00000588555 TRIM38O00635 465 aa24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 CFLARO15519 480 aa24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 IL6P05231 212 aa24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 NR1D2Q14995 579 aa24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 ZCCHC8Q6NZY4 707 aaKnown RBP24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 RNF44Q7L0R7 432 aa24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 OR4C6Q8NH72 309 aa24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 GFM2Q969S9 779 aaKnown RBP24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 RGMAQ96B86 450 aa24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 MS4A6EQ96DS6 147 aa24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 TM4SF19Q96DZ7 209 aa24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 CLPTM1LQ96KA5 538 aa24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 DUSP23Q9BVJ7 150 aa24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 SLC6A16Q9GZN6 736 aa24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 PCDHGA7Q9Y5G6 932 aa24.83■■□□□ 1.57
SCAMP4-210ENST00000588555 C4orf51C9J302 202 aa24.82■■□□□ 1.56
SCAMP4-210ENST00000588555 FXYD1O00168 92 aa24.82■■□□□ 1.56
SCAMP4-210ENST00000588555 PGRP06401 933 aa24.82■■□□□ 1.56
SCAMP4-210ENST00000588555 ST6GAL1P15907 406 aa24.82■■□□□ 1.56
SCAMP4-210ENST00000588555 RAP1GDS1P52306 607 aa24.82■■□□□ 1.56
SCAMP4-210ENST00000588555 PHC1P78364 1004 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms