RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 ZSWIM9Q86XI8 627 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ZDHHC21Q8IVQ6 265 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 RIMKLAQ8IXN7 391 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ATG16L2Q8NAA4 619 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 DDHD1Q8NEL9 900 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 C1orf162Q8NEQ5 155 aaPredicted RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 GPR156Q8NFN8 814 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ISG20Q96AZ6 181 aaKnown RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 APIPQ96GX9 242 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 MS4A5Q9H3V2 200 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 IFT22Q9H7X7 185 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 GPRC5BQ9NZH0 403 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 M0R3H8 397 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 UPK1AO00322 258 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 ERN1O75460 977 aaKnown RBP5.17□□□□□ -1.58
VAPA-203ENST00000577539 NAT2P11245 290 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 CYP2A7P20853 494 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 RPS3P23396 243 aaKnown RBP eCLIP5.17□□□□□ -1.58
VAPA-203ENST00000577539 HOXC12P31275 282 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 FMO3P31513 532 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 DCTP40126 519 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 CDKN2CP42773 168 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 SYTL3Q4VX76 610 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 MPPE1Q53F39 396 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 RUNDC3AQ59EK9 446 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 XKR6Q5GH73 641 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 C6orf141Q5SZD1 244 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 GALNT18Q6P9A2 607 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 ZNF783Q6ZMS7 281 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 MACC1Q6ZN28 852 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 DPY19L3Q6ZPD9 716 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 TPRG1Q6ZUI0 275 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 MSRB3Q8IXL7 192 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 LSM14AQ8ND56 463 aaKnown RBP5.17□□□□□ -1.58
VAPA-203ENST00000577539 CNIH3Q8TBE1 160 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 MYOCQ99972 504 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 LHPPQ9H008 270 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 BRD9Q9H8M2 597 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 DNAJC11Q9NVH1 559 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 SH3BP4Q9P0V3 963 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 B4GALT6Q9UBX8 382 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 TRPS1Q9UHF7 1281 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 OR51B4Q9Y5P0 310 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 ST14Q9Y5Y6 855 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 BRCA2P51587 3418 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 LOC100130705A0A1B0GUX0 176 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 NEDD8-MDP1E9PL57 170 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 FPGTO14772 594 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 BCKDKO14874 412 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 EFCAB14O75071 495 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 IGFBP5P24593 272 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 PSMB9P28065 219 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 RAD52P43351 418 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 PHC1P78364 1004 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 ACSM2AQ08AH3 577 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 ITGADQ13349 1161 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 NAE1Q13564 534 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 ACSM2BQ68CK6 577 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 CRTC3Q6UUV7 619 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 VRK3Q8IV63 474 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 C10orf111Q8N326 155 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 TERB1Q8NA31 727 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 CHST14Q8NCH0 376 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 OR7A2PQ8NGA2 310 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 OR5K1Q8NHB7 308 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 ERLEC1Q96DZ1 483 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 ALG14Q96F25 216 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 NODALQ96S42 347 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 CDC6Q99741 560 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 SLC12A9Q9BXP2 914 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 HDAC8Q9BY41 377 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 YTHDF1Q9BYJ9 559 aaKnown RBP5.17□□□□□ -1.58
VAPA-203ENST00000577539 AMBRA1Q9C0C7 1298 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 REXO4Q9GZR2 422 aaKnown RBP5.17□□□□□ -1.58
VAPA-203ENST00000577539 CLMPQ9H6B4 373 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 MBD1Q9UIS9 605 aaPredicted RBP5.17□□□□□ -1.58
VAPA-203ENST00000577539 INTS6Q9UL03 887 aaKnown RBP5.17□□□□□ -1.58
VAPA-203ENST00000577539 SAMHD1Q9Y3Z3 626 aaKnown RBP5.17□□□□□ -1.58
VAPA-203ENST00000577539 GNG14A0A1W2PPG7 69 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 CLIC1O00299 241 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 TEX28O15482 410 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 LILRB5O75023 590 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 SOCS5O75159 536 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 MYO1DO94832 1006 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 EPN2O95208 641 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 ANGPTL1O95841 491 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 PRPS2P11908 318 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 SRCP12931 536 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 ENGP17813 658 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 PFKLP17858 780 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 SDC1P18827 310 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 LHCGRP22888 699 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 THBS2P35442 1172 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 PPP3CCP48454 512 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 CLDN8P56748 225 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 OCA2Q04671 838 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 TLE2Q04725 743 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 EPS8Q12929 822 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 NFATC3Q12968 1075 aa5.17□□□□□ -1.58
VAPA-203ENST00000577539 USP39Q53GS9 565 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms