RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 C7P10643 843 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 CELP19835 753 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 RNF144AP50876 292 aaPredicted RBP17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 ATG9BQ674R7 924 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 LHFPL3Q86UP9 236 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 OR9Q2Q8NGE9 314 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 TAS2R9Q9NYW1 312 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 QSOX1O00391 747 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 RTCAO00442 366 aaKnown RBP17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 GRM6O15303 877 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 ORC5O43913 435 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 SLC11A1P49279 550 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 ARL4DP49703 201 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 PRKCZQ05513 592 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 DESI1Q6ICB0 168 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 CHPFQ8IZ52 775 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 FAM98AQ8NCA5 519 aaKnown RBP17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 COQ3Q9NZJ6 369 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 HCN4Q9Y3Q4 1203 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 H1F0P07305 194 aaKnown RBP17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 FHP07954 510 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 LAMP2P13473 410 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 RUNDC3AQ59EK9 446 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 SLC35F1Q5T1Q4 408 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 TMEM207Q6UWW9 146 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 MDGA1Q8NFP4 955 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 SIPA1Q96FS4 1042 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 UBXN10Q96LJ8 280 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 TRPM3Q9HCF6 1732 aaPredicted RBP17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 SLCO3A1Q9UIG8 710 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 INTS6Q9UL03 887 aaKnown RBP17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 MKLN1Q9UL63 735 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 NME7Q9Y5B8 376 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 TRAV6A0A075B6T7 132 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 SOCS7O14512 581 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 PAX3P23760 479 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 CD97P48960 835 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 FCHO2Q0JRZ9 810 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 PPIGQ13427 754 aaKnown RBP eCLIP17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 BICRALQ6AI39 1079 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 C22orf42Q6IC83 251 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 LMNTD1Q8N9Z9 388 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 HTATIP2Q9BUP3 242 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 BRINP2Q9C0B6 783 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 PLAC1Q9HBJ0 212 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 USP3Q9Y6I4 520 aa17.29■□□□□ 0.36
ATPAF1-214ENST00000576409 ARNTP27540 789 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 SSTR4P31391 388 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 FAM124AQ86V42 546 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 SLC22A17Q8WUG5 538 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 GEMIN6Q8WXD5 167 aaKnown RBP17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 UFD1Q92890 307 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 A6NL46 340 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 I3L521 148 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 GUCY1B2O75343 617 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 SLITRK5O94991 958 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 YES1P07947 543 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 ATP1B2P14415 290 aaPredicted RBP17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 ATF4P18848 351 aaPredicted RBP17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 CD72P21854 359 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 DOK4Q8TEW6 326 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 TIFAQ96CG3 184 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 TUBB1Q9H4B7 451 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 POPDC3Q9HBV1 291 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 IL1RAPQ9NPH3 570 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 ZNF780BQ9Y6R6 833 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 C2orf78A6NCI8 922 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 CHURC1-FNTBB4DL54 471 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 MPZL2O60487 215 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 CNMDO75829 334 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 SPATC1Q76KD6 591 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 FAM129CQ86XR2 697 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 SMG7Q92540 1137 aaKnown RBP17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 FRMD6Q96NE9 622 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 UCK2Q9BZX2 261 aa17.28■□□□□ 0.36
ATPAF1-214ENST00000576409 C2orf92A0A1B0GVN3 265 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 MUSKO15146 869 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 PDPK1O15530 556 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 PIGAP37287 484 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 GPR17Q13304 367 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 GRB14Q14449 540 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 PRR23CQ6ZRP0 262 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 SHFQ7M4L6 423 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 MEX3DQ86XN8 651 aaKnown RBP17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 PHYKPLQ8IUZ5 450 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 ASCC1Q8N9N2 400 aaKnown RBP17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 ZCCHC10Q8TBK6 192 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 DNASE1L2Q92874 299 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 CMTM7Q96FZ5 175 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 TMEM30AQ9NV96 361 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 BOLA1Q9Y3E2 137 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 ITGB4P16144 1822 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 DDX60LQ5H9U9 1706 aaKnown RBP17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 TACR1P25103 407 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 ALDH3B2P48448 385 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 GRIK2Q13002 908 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 ZNF613Q6PF04 617 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 CADM2Q8N3J6 435 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 C17orf50Q8WW18 174 aa17.27■□□□□ 0.36
ATPAF1-214ENST00000576409 SLCO4A1Q96BD0 722 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms