RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 SNRNP25Q9BV90 132 aaKnown RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 C1orf43Q9BWL3 253 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 DUSP16Q9BY84 665 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 ULBP1Q9BZM6 244 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 DERL2Q9GZP9 239 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 MFFQ9GZY8 342 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PCDHAC1Q9H158 963 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 EPB41L4BQ9H329 900 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 TMEM245Q9H330 911 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 SLITRK6Q9H5Y7 841 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 IPPKQ9H8X2 491 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 FN3KRPQ9HA64 309 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CNGB3Q9NQW8 809 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 RGS18Q9NS28 235 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 SLC38A7Q9NVC3 462 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 THAP1Q9NVV9 213 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 GPATCH2Q9NW75 528 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 MARCH5Q9NX47 278 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 ERVK13-1Q9NX77 482 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 ELOVL2Q9NXB9 296 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PGPEP1Q9NXJ5 209 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CACNA2D2Q9NY47 1150 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 EURLQ9NYK6 297 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 SPG21Q9NZD8 308 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 GRHL1Q9NZI5 618 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 HAO1Q9UJM8 370 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CDH9Q9ULB4 789 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 CBLCQ9ULV8 474 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 FZD10Q9ULW2 581 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 TMCO1Q9UM00 188 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 SPATA2Q9UM82 520 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 VPS4AQ9UN37 437 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 AP3M1Q9Y2T2 418 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 PRG3Q9Y2Y8 225 aaPredicted RBP3.44□□□□□ -1.86
SMG6-208ENST00000570874 NEU2Q9Y3R4 380 aa3.44□□□□□ -1.86
SMG6-208ENST00000570874 MBD3L4A6NDZ8 208 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 MBD3L3A6NE82 208 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 TUBAL3A6NHL2 446 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 YJEFN3A6XGL0 299 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 C4orf47A7E2U8 309 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 SYCE1LA8MT33 242 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 PDZK1P1A8MUH7 402 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 E7ENQ6 273 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 H0YJX3 145 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 M0QZQ0 153 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 HGSO14964 777 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 ADAM12O43184 909 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 SPINT1O43278 529 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 LIASO43766 372 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CST8O60676 142 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 MMP20O60882 483 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CDH16O75309 829 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 VPS4BO75351 444 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 PSIP1O75475 530 aaKnown RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 DFFBO76075 338 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ARHGEF15O94989 841 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 UPP2O95045 317 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 MBP02144 154 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 FGBP02675 491 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 F11P03951 625 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 UGT2B4P06133 528 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 THBS1P07996 1170 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CHRM2P08172 466 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 GSTA1P08263 222 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 GSTA2P09210 222 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 H2AFB2P0C5Z0 115 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 FAM58BPP0C7Q3 252 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 C8orf89P0DMQ9 161 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 SLC2A3P11169 496 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ITGA2P17301 1181 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 GABRB1P18505 474 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ITGB6P18564 788 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 FUT1P19526 365 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 SRMP19623 302 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 AMPD1P23109 780 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 PRKCHP24723 683 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 IVDP26440 423 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 KLRC2P26717 231 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CD40LGP29965 261 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 PKLRP30613 574 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 APOBEC3AP31941 199 aaPredicted RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 HMGCLP35914 325 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 HSD17B3P37058 310 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 HSPA9P38646 679 aaKnown RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 FEN1P39748 380 aaKnown RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 CASRP41180 1078 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 GATA4P43694 442 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 SLC6A11P48066 632 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 RPL34P49207 117 aaKnown RBP3.43□□□□□ -1.86
SMG6-208ENST00000570874 SERPINB9P50453 376 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CCR4P51679 360 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 DGKEP52429 567 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 ARFIP2P53365 341 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CEBPGP53567 150 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 CDH15P55291 814 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 UCP2P55851 309 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 WNT3P56703 355 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 DAOAP59103 153 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 GNGT1P63211 74 aa3.43□□□□□ -1.86
SMG6-208ENST00000570874 TAP1Q03518 808 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms